RNA–Protein interactions for RNA: ENST00000542722.5

GABARAPL1-211, Transcript of GABA type A receptor associated protein like 1, humanhuman

TSL 5

Gene GABARAPL1, Length 1,423 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABARAPL1-211ENST00000542722 NPHP4O75161 1426 aaPredicted RBP24.78■■□□□ 1.56
GABARAPL1-211ENST00000542722 ALKQ9UM73 1620 aa24.75■■□□□ 1.55
GABARAPL1-211ENST00000542722 CLTCL1P53675 1640 aa24.73■■□□□ 1.55
GABARAPL1-211ENST00000542722 IQGAP1P46940 1657 aa24.69■■□□□ 1.54
GABARAPL1-211ENST00000542722 L3MBTL2Q969R5 705 aa24.68■■□□□ 1.54
GABARAPL1-211ENST00000542722 CFAP65Q6ZU64 1925 aaKnown RBP24.68■■□□□ 1.54
GABARAPL1-211ENST00000542722 NOS1P29475 1434 aa24.67■■□□□ 1.54
GABARAPL1-211ENST00000542722 PPP1R15AO75807 674 aaPredicted RBP24.67■■□□□ 1.54
GABARAPL1-211ENST00000542722 LRRC7Q96NW7 1537 aa24.66■■□□□ 1.54
GABARAPL1-211ENST00000542722 SYNMO15061 1565 aa24.64■■□□□ 1.54
GABARAPL1-211ENST00000542722 KIF1BO60333 1816 aa24.64■■□□□ 1.54
GABARAPL1-211ENST00000542722 STRCP1A6NGW2 1772 aa24.63■■□□□ 1.53
GABARAPL1-211ENST00000542722 ERVK-7P63135 1459 aa24.63■■□□□ 1.53
GABARAPL1-211ENST00000542722 PHF23Q9BUL5 403 aaPredicted RBP24.63■■□□□ 1.53
GABARAPL1-211ENST00000542722 PIK3C2BO00750 1634 aa24.61■■□□□ 1.53
GABARAPL1-211ENST00000542722 SPATA31E1Q6ZUB1 1445 aa24.6■■□□□ 1.53
GABARAPL1-211ENST00000542722 ADGRB3O60242 1522 aa24.56■■□□□ 1.52
GABARAPL1-211ENST00000542722 RGL3Q3MIN7 710 aa24.55■■□□□ 1.52
GABARAPL1-211ENST00000542722 SCAF11Q99590 1463 aaKnown RBP24.55■■□□□ 1.52
GABARAPL1-211ENST00000542722 SLC52A1Q9NWF4 448 aa24.54■■□□□ 1.52
GABARAPL1-211ENST00000542722 UBR1Q8IWV7 1749 aa24.54■■□□□ 1.52
GABARAPL1-211ENST00000542722 DCAF11Q8TEB1 546 aa24.53■■□□□ 1.52
GABARAPL1-211ENST00000542722 ARHGAP23Q9P227 1491 aa24.53■■□□□ 1.52
GABARAPL1-211ENST00000542722 SLIT1O75093 1534 aa24.51■■□□□ 1.51
GABARAPL1-211ENST00000542722 LTKP29376 864 aa24.51■■□□□ 1.51
GABARAPL1-211ENST00000542722 CHGAP10645 457 aaKnown RBP24.49■■□□□ 1.51
GABARAPL1-211ENST00000542722 SENP3Q9H4L4 574 aaPredicted RBP24.49■■□□□ 1.51
GABARAPL1-211ENST00000542722 KDM2AQ9Y2K7 1162 aa24.49■■□□□ 1.51
GABARAPL1-211ENST00000542722 TXNDC2Q86VQ3 553 aa24.48■■□□□ 1.51
GABARAPL1-211ENST00000542722 ZNF326Q5BKZ1 582 aaKnown RBP24.47■■□□□ 1.51
GABARAPL1-211ENST00000542722 IFT172Q9UG01 1749 aa24.47■■□□□ 1.51
GABARAPL1-211ENST00000542722 IDI1Q13907 227 aa24.46■■□□□ 1.51
GABARAPL1-211ENST00000542722 NBPF8Q3BBV2 869 aa24.46■■□□□ 1.51
GABARAPL1-211ENST00000542722 STAC3Q96MF2 364 aa24.46■■□□□ 1.51
GABARAPL1-211ENST00000542722 RGS17Q9UGC6 210 aaPredicted RBP24.46■■□□□ 1.51
GABARAPL1-211ENST00000542722 PRAG1Q86YV5 1406 aa24.45■■□□□ 1.5
GABARAPL1-211ENST00000542722 TMEM131LA2VDJ0 1609 aa24.44■■□□□ 1.5
GABARAPL1-211ENST00000542722 MYOM2P54296 1465 aa24.44■■□□□ 1.5
GABARAPL1-211ENST00000542722 RALGAPBQ86X10 1494 aa24.42■■□□□ 1.5
GABARAPL1-211ENST00000542722 PPLO60437 1756 aa24.42■■□□□ 1.5
GABARAPL1-211ENST00000542722 XIRP1Q702N8 1843 aaKnown RBP24.42■■□□□ 1.5
GABARAPL1-211ENST00000542722 EID1Q9Y6B2 187 aa24.42■■□□□ 1.5
GABARAPL1-211ENST00000542722 RPGRIP1LQ68CZ1 1315 aa24.42■■□□□ 1.5
GABARAPL1-211ENST00000542722 MYO5BQ9ULV0 1848 aa24.41■■□□□ 1.5
GABARAPL1-211ENST00000542722 FAM135BQ49AJ0 1406 aa24.41■■□□□ 1.5
GABARAPL1-211ENST00000542722 TMEM2Q9UHN6 1383 aa24.4■■□□□ 1.5
GABARAPL1-211ENST00000542722 TRPM1Q7Z4N2 1603 aa24.4■■□□□ 1.5
GABARAPL1-211ENST00000542722 STAG3Q9UJ98 1225 aa24.39■■□□□ 1.5
GABARAPL1-211ENST00000542722 KDM5AP29375 1690 aaKnown RBP24.38■■□□□ 1.49
GABARAPL1-211ENST00000542722 ZNF316A6NFI3 1004 aaPredicted RBP24.37■■□□□ 1.49
GABARAPL1-211ENST00000542722 NEXMIFQ5QGS0 1516 aa24.37■■□□□ 1.49
GABARAPL1-211ENST00000542722 TMEM94Q12767 1356 aa24.33■■□□□ 1.49
GABARAPL1-211ENST00000542722 NRXN1Q9ULB1 1477 aa24.33■■□□□ 1.49
GABARAPL1-211ENST00000542722 ROCK2O75116 1388 aaKnown RBP24.33■■□□□ 1.48
GABARAPL1-211ENST00000542722 KCNA6P17658 529 aa24.32■■□□□ 1.48
GABARAPL1-211ENST00000542722 KIAA1210Q9ULL0 1709 aa24.32■■□□□ 1.48
GABARAPL1-211ENST00000542722 LAMC1P11047 1609 aa24.3■■□□□ 1.48
GABARAPL1-211ENST00000542722 ADGRF5Q8IZF2 1346 aa24.29■■□□□ 1.48
GABARAPL1-211ENST00000542722 VGFO15240 615 aaPredicted RBP24.28■■□□□ 1.48
GABARAPL1-211ENST00000542722 EIF4G2P78344 907 aaKnown RBP eCLIP24.28■■□□□ 1.48
GABARAPL1-211ENST00000542722 ZFYVE9O95405 1425 aa24.28■■□□□ 1.48
GABARAPL1-211ENST00000542722 POTEAQ6S8J7 498 aa24.27■■□□□ 1.48
GABARAPL1-211ENST00000542722 GPRASP1Q5JY77 1395 aa24.27■■□□□ 1.48
GABARAPL1-211ENST00000542722 CARD11Q9BXL7 1154 aa24.27■■□□□ 1.48
GABARAPL1-211ENST00000542722 PIK3C2GO75747 1445 aa24.26■■□□□ 1.47
GABARAPL1-211ENST00000542722 RIMS2Q9UQ26 1411 aa24.26■■□□□ 1.47
GABARAPL1-211ENST00000542722 ROBO1Q9Y6N7 1651 aa24.25■■□□□ 1.47
GABARAPL1-211ENST00000542722 PROSER2Q86WR7 435 aaPredicted RBP24.25■■□□□ 1.47
GABARAPL1-211ENST00000542722 SLC26A8Q96RN1 970 aa24.24■■□□□ 1.47
GABARAPL1-211ENST00000542722 USP47Q96K76 1375 aa24.23■■□□□ 1.47
GABARAPL1-211ENST00000542722 NKTRP30414 1462 aaKnown RBP24.23■■□□□ 1.47
GABARAPL1-211ENST00000542722 HSPA5P11021 654 aaKnown RBP24.23■■□□□ 1.47
GABARAPL1-211ENST00000542722 NWD1Q149M9 1564 aa24.22■■□□□ 1.47
GABARAPL1-211ENST00000542722 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.21■■□□□ 1.47
GABARAPL1-211ENST00000542722 NBPF1Q3BBV0 1214 aa24.2■■□□□ 1.46
GABARAPL1-211ENST00000542722 NUTM2DQ5VT03 806 aaPredicted RBP24.2■■□□□ 1.46
GABARAPL1-211ENST00000542722 RBM33Q96EV2 1170 aaKnown RBP24.2■■□□□ 1.46
GABARAPL1-211ENST00000542722 HDGFP51858 240 aaKnown RBP24.19■■□□□ 1.46
GABARAPL1-211ENST00000542722 SETBP1Q9Y6X0 1596 aa24.19■■□□□ 1.46
GABARAPL1-211ENST00000542722 MSH6P52701 1360 aa24.17■■□□□ 1.46
GABARAPL1-211ENST00000542722 CFAP70Q5T0N1 1121 aa24.17■■□□□ 1.46
GABARAPL1-211ENST00000542722 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
GABARAPL1-211ENST00000542722 SLAIN2Q9P270 581 aa24.16■■□□□ 1.46
GABARAPL1-211ENST00000542722 C14orf93Q9H972 538 aaKnown RBP24.15■■□□□ 1.46
GABARAPL1-211ENST00000542722 JCADQ9P266 1359 aa24.13■■□□□ 1.45
GABARAPL1-211ENST00000542722 ADGRB1O14514 1584 aa24.11■■□□□ 1.45
GABARAPL1-211ENST00000542722 PLEKHG1Q9ULL1 1385 aa24.11■■□□□ 1.45
GABARAPL1-211ENST00000542722 EIF3AQ14152 1382 aaKnown RBP24.1■■□□□ 1.45
GABARAPL1-211ENST00000542722 PHLPP1O60346 1717 aa24.1■■□□□ 1.45
GABARAPL1-211ENST00000542722 BCANQ96GW7 911 aa24.09■■□□□ 1.45
GABARAPL1-211ENST00000542722 NCOA3Q9Y6Q9 1424 aa24.08■■□□□ 1.45
GABARAPL1-211ENST00000542722 NRXN3Q9Y4C0 1643 aa24.07■■□□□ 1.44
GABARAPL1-211ENST00000542722 CHD2O14647 1828 aaKnown RBP24.07■■□□□ 1.44
GABARAPL1-211ENST00000542722 COL16A1Q07092 1604 aaPredicted RBP24.05■■□□□ 1.44
GABARAPL1-211ENST00000542722 ST20-MTHFSA0A0A6YYL1 179 aa24.05■■□□□ 1.44
GABARAPL1-211ENST00000542722 ASXL1Q8IXJ9 1541 aa24.05■■□□□ 1.44
GABARAPL1-211ENST00000542722 SETD1AO15047 1707 aaKnown RBP24.05■■□□□ 1.44
GABARAPL1-211ENST00000542722 TBX22Q9Y458 520 aa24.04■■□□□ 1.44
GABARAPL1-211ENST00000542722 TMEM132EQ6IEE7 984 aa24.01■■□□□ 1.43
GABARAPL1-211ENST00000542722 SPATA31A6Q5VVP1 1343 aa24.01■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms