RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 UBR1Q8IWV7 1749 aa18.83■□□□□ 0.6
CHFR-221ENST00000542714 RPGRIP1LQ68CZ1 1315 aa18.82■□□□□ 0.6
CHFR-221ENST00000542714 HSPA5P11021 654 aaKnown RBP18.82■□□□□ 0.6
CHFR-221ENST00000542714 ADGRF5Q8IZF2 1346 aa18.81■□□□□ 0.6
CHFR-221ENST00000542714 HIRIP3Q9BW71 556 aaPredicted RBP18.81■□□□□ 0.6
CHFR-221ENST00000542714 IQGAP1P46940 1657 aa18.81■□□□□ 0.6
CHFR-221ENST00000542714 CEBPAP49715 358 aaPredicted RBP18.8■□□□□ 0.6
CHFR-221ENST00000542714 ROCK2O75116 1388 aaKnown RBP18.8■□□□□ 0.6
CHFR-221ENST00000542714 EIF4G2P78344 907 aaKnown RBP eCLIP18.79■□□□□ 0.6
CHFR-221ENST00000542714 NBPF1Q3BBV0 1214 aa18.79■□□□□ 0.6
CHFR-221ENST00000542714 PIK3C2GO75747 1445 aa18.79■□□□□ 0.6
CHFR-221ENST00000542714 POLR1AO95602 1720 aaPredicted RBP18.79■□□□□ 0.6
CHFR-221ENST00000542714 USP47Q96K76 1375 aa18.79■□□□□ 0.6
CHFR-221ENST00000542714 MYO3AQ8NEV4 1616 aa18.78■□□□□ 0.6
CHFR-221ENST00000542714 NLRP1Q9C000 1473 aa18.77■□□□□ 0.6
CHFR-221ENST00000542714 ZFYVE9O95405 1425 aa18.77■□□□□ 0.6
CHFR-221ENST00000542714 CARD11Q9BXL7 1154 aa18.76■□□□□ 0.59
CHFR-221ENST00000542714 SETBP1Q9Y6X0 1596 aa18.74■□□□□ 0.59
CHFR-221ENST00000542714 RIMS2Q9UQ26 1411 aa18.73■□□□□ 0.59
CHFR-221ENST00000542714 ADGRB1O14514 1584 aa18.72■□□□□ 0.59
CHFR-221ENST00000542714 ZNF142P52746 1687 aaPredicted RBP18.71■□□□□ 0.59
CHFR-221ENST00000542714 CFAP70Q5T0N1 1121 aa18.71■□□□□ 0.59
CHFR-221ENST00000542714 NUTM2DQ5VT03 806 aaPredicted RBP18.71■□□□□ 0.59
CHFR-221ENST00000542714 STAG3Q9UJ98 1225 aa18.71■□□□□ 0.59
CHFR-221ENST00000542714 SETD1AO15047 1707 aaKnown RBP18.71■□□□□ 0.59
CHFR-221ENST00000542714 ASXL1Q8IXJ9 1541 aa18.69■□□□□ 0.58
CHFR-221ENST00000542714 VGFO15240 615 aaPredicted RBP18.69■□□□□ 0.58
CHFR-221ENST00000542714 PLPPR3Q6T4P5 718 aa18.69■□□□□ 0.58
CHFR-221ENST00000542714 NRXN3Q9Y4C0 1643 aa18.69■□□□□ 0.58
CHFR-221ENST00000542714 CEP170BQ9Y4F5 1589 aaPredicted RBP18.68■□□□□ 0.58
CHFR-221ENST00000542714 DIEXFQ68CQ4 756 aaKnown RBP18.68■□□□□ 0.58
CHFR-221ENST00000542714 C14orf93Q9H972 538 aaKnown RBP18.68■□□□□ 0.58
CHFR-221ENST00000542714 SCAF11Q99590 1463 aaKnown RBP18.68■□□□□ 0.58
CHFR-221ENST00000542714 PTPRMP28827 1452 aa18.67■□□□□ 0.58
CHFR-221ENST00000542714 C11orf95C9JLR9 678 aaPredicted RBP18.66■□□□□ 0.58
CHFR-221ENST00000542714 ALKQ9UM73 1620 aa18.66■□□□□ 0.58
CHFR-221ENST00000542714 SETD1BQ9UPS6 1966 aaKnown RBP18.66■□□□□ 0.58
CHFR-221ENST00000542714 TMEM2Q9UHN6 1383 aa18.66■□□□□ 0.58
CHFR-221ENST00000542714 ARHGAP23Q9P227 1491 aa18.65■□□□□ 0.58
CHFR-221ENST00000542714 SLIT1O75093 1534 aa18.65■□□□□ 0.58
CHFR-221ENST00000542714 WASHC2AQ641Q2 1341 aa18.65■□□□□ 0.58
CHFR-221ENST00000542714 ST20-MTHFSA0A0A6YYL1 179 aa18.64■□□□□ 0.57
CHFR-221ENST00000542714 ARHGEF28Q8N1W1 1705 aaKnown RBP18.63■□□□□ 0.57
CHFR-221ENST00000542714 CCDC7Q96M83 1385 aa18.63■□□□□ 0.57
CHFR-221ENST00000542714 KIF7Q2M1P5 1343 aa18.6■□□□□ 0.57
CHFR-221ENST00000542714 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.6■□□□□ 0.57
CHFR-221ENST00000542714 TESK2Q96S53 571 aa18.59■□□□□ 0.57
CHFR-221ENST00000542714 QRICH2Q9H0J4 1663 aa18.59■□□□□ 0.57
CHFR-221ENST00000542714 DDX10Q13206 875 aaKnown RBP18.58■□□□□ 0.56
CHFR-221ENST00000542714 TMEM132EQ6IEE7 984 aa18.58■□□□□ 0.56
CHFR-221ENST00000542714 SENP3Q9H4L4 574 aaPredicted RBP18.57■□□□□ 0.56
CHFR-221ENST00000542714 EIF3AQ14152 1382 aaKnown RBP18.56■□□□□ 0.56
CHFR-221ENST00000542714 LTKP29376 864 aa18.56■□□□□ 0.56
CHFR-221ENST00000542714 DISP3Q9P2K9 1392 aa18.55■□□□□ 0.56
CHFR-221ENST00000542714 PLEKHG1Q9ULL1 1385 aa18.55■□□□□ 0.56
CHFR-221ENST00000542714 ADAMTS13Q76LX8 1427 aa18.54■□□□□ 0.56
CHFR-221ENST00000542714 KNDC1Q76NI1 1749 aa18.54■□□□□ 0.56
CHFR-221ENST00000542714 MED14O60244 1454 aa18.53■□□□□ 0.56
CHFR-221ENST00000542714 HDGFP51858 240 aaKnown RBP18.53■□□□□ 0.56
CHFR-221ENST00000542714 THEMISQ8N1K5 641 aaPredicted RBP18.53■□□□□ 0.56
CHFR-221ENST00000542714 YTHDC2Q9H6S0 1430 aaKnown RBP18.53■□□□□ 0.56
CHFR-221ENST00000542714 KDM4FA0A1W2PPD8 638 aa18.51■□□□□ 0.55
CHFR-221ENST00000542714 TRAK1Q9UPV9 953 aa18.51■□□□□ 0.55
CHFR-221ENST00000542714 DLC1Q96QB1 1528 aa18.5■□□□□ 0.55
CHFR-221ENST00000542714 TXNDC2Q86VQ3 553 aa18.5■□□□□ 0.55
CHFR-221ENST00000542714 METP08581 1390 aa18.5■□□□□ 0.55
CHFR-221ENST00000542714 SBNO2Q9Y2G9 1366 aa18.5■□□□□ 0.55
CHFR-221ENST00000542714 DIP2AQ14689 1571 aa18.49■□□□□ 0.55
CHFR-221ENST00000542714 MYOM1P52179 1685 aa18.49■□□□□ 0.55
CHFR-221ENST00000542714 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
CHFR-221ENST00000542714 LRPPRCP42704 1394 aaKnown RBP18.48■□□□□ 0.55
CHFR-221ENST00000542714 EID1Q9Y6B2 187 aa18.48■□□□□ 0.55
CHFR-221ENST00000542714 CPS1P31327 1500 aa18.46■□□□□ 0.55
CHFR-221ENST00000542714 TMF1P82094 1093 aa18.46■□□□□ 0.55
CHFR-221ENST00000542714 TULP4Q9NRJ4 1543 aa18.45■□□□□ 0.54
CHFR-221ENST00000542714 MIER1Q8N108 512 aa18.45■□□□□ 0.54
CHFR-221ENST00000542714 STK26Q9P289 416 aa18.45■□□□□ 0.54
CHFR-221ENST00000542714 TECPR2O15040 1411 aa18.45■□□□□ 0.54
CHFR-221ENST00000542714 ABCC11Q96J66 1382 aa18.44■□□□□ 0.54
CHFR-221ENST00000542714 POLR3GLQ9BT43 218 aa18.44■□□□□ 0.54
CHFR-221ENST00000542714 PTPRUQ92729 1446 aa18.42■□□□□ 0.54
CHFR-221ENST00000542714 XRN1Q8IZH2 1706 aaKnown RBP18.42■□□□□ 0.54
CHFR-221ENST00000542714 BCANQ96GW7 911 aa18.41■□□□□ 0.54
CHFR-221ENST00000542714 PLEKHH1Q9ULM0 1364 aa18.4■□□□□ 0.54
CHFR-221ENST00000542714 ANKLE2Q86XL3 938 aa18.39■□□□□ 0.53
CHFR-221ENST00000542714 PRAM1Q96QH2 718 aa18.39■□□□□ 0.53
CHFR-221ENST00000542714 SLC26A8Q96RN1 970 aa18.39■□□□□ 0.53
CHFR-221ENST00000542714 TBX22Q9Y458 520 aa18.39■□□□□ 0.53
CHFR-221ENST00000542714 CHD2O14647 1828 aaKnown RBP18.38■□□□□ 0.53
CHFR-221ENST00000542714 FAM135BQ49AJ0 1406 aa18.38■□□□□ 0.53
CHFR-221ENST00000542714 SLC24A1O60721 1099 aa18.37■□□□□ 0.53
CHFR-221ENST00000542714 NPHP4O75161 1426 aaPredicted RBP18.36■□□□□ 0.53
CHFR-221ENST00000542714 CDCA8Q53HL2 280 aa18.36■□□□□ 0.53
CHFR-221ENST00000542714 ROBO2Q9HCK4 1378 aa18.36■□□□□ 0.53
CHFR-221ENST00000542714 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.35■□□□□ 0.53
CHFR-221ENST00000542714 LMTK3Q96Q04 1460 aa18.35■□□□□ 0.53
CHFR-221ENST00000542714 SAFB2Q14151 953 aaKnown RBP eCLIP18.35■□□□□ 0.53
CHFR-221ENST00000542714 SIRT1Q96EB6 747 aa18.35■□□□□ 0.53
CHFR-221ENST00000542714 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
CHFR-221ENST00000542714 POGKQ9P215 609 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms