RNA–Protein interactions for RNA: ENST00000542669.1

PACRG-206, Transcript of parkin coregulated, humanhuman

TSL 4

Gene PACRG, Length 574 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACRG-206ENST00000542669 RNF39Q9H2S5 420 aa9.53□□□□□ -0.88
PACRG-206ENST00000542669 NRXN1Q9ULB1 1477 aa9.53□□□□□ -0.88
PACRG-206ENST00000542669 TMEM131LA2VDJ0 1609 aa9.53□□□□□ -0.88
PACRG-206ENST00000542669 ZMYM3Q14202 1370 aa9.52□□□□□ -0.88
PACRG-206ENST00000542669 USP47Q96K76 1375 aa9.52□□□□□ -0.88
PACRG-206ENST00000542669 IDI1Q13907 227 aa9.52□□□□□ -0.89
PACRG-206ENST00000542669 KIAA1210Q9ULL0 1709 aa9.52□□□□□ -0.89
PACRG-206ENST00000542669 ROCK2O75116 1388 aaKnown RBP9.51□□□□□ -0.89
PACRG-206ENST00000542669 FER1L4A9Z1Z3 1794 aa9.51□□□□□ -0.89
PACRG-206ENST00000542669 ESF1Q9H501 851 aaKnown RBP9.51□□□□□ -0.89
PACRG-206ENST00000542669 MYO5BQ9ULV0 1848 aa9.51□□□□□ -0.89
PACRG-206ENST00000542669 RPGRIP1LQ68CZ1 1315 aa9.51□□□□□ -0.89
PACRG-206ENST00000542669 NEXMIFQ5QGS0 1516 aa9.51□□□□□ -0.89
PACRG-206ENST00000542669 CARD11Q9BXL7 1154 aa9.5□□□□□ -0.89
PACRG-206ENST00000542669 POLR1AO95602 1720 aaPredicted RBP9.49□□□□□ -0.89
PACRG-206ENST00000542669 CHGAP10645 457 aaKnown RBP9.49□□□□□ -0.89
PACRG-206ENST00000542669 NBPF1Q3BBV0 1214 aa9.49□□□□□ -0.89
PACRG-206ENST00000542669 ADGRF5Q8IZF2 1346 aa9.49□□□□□ -0.89
PACRG-206ENST00000542669 C3P01024 1663 aa9.48□□□□□ -0.89
PACRG-206ENST00000542669 PIK3C2GO75747 1445 aa9.48□□□□□ -0.89
PACRG-206ENST00000542669 DCAF8L1A6NGE4 600 aa9.48□□□□□ -0.89
PACRG-206ENST00000542669 IQGAP1P46940 1657 aa9.48□□□□□ -0.89
PACRG-206ENST00000542669 ZFYVE9O95405 1425 aa9.48□□□□□ -0.89
PACRG-206ENST00000542669 KDM5AP29375 1690 aaKnown RBP9.47□□□□□ -0.89
PACRG-206ENST00000542669 WASHC2AQ641Q2 1341 aa9.47□□□□□ -0.89
PACRG-206ENST00000542669 TNRQ92752 1358 aa9.47□□□□□ -0.89
PACRG-206ENST00000542669 A2ML1A8K2U0 1454 aa9.47□□□□□ -0.89
PACRG-206ENST00000542669 ADAMTSL3P82987 1691 aa9.46□□□□□ -0.89
PACRG-206ENST00000542669 SETBP1Q9Y6X0 1596 aa9.46□□□□□ -0.9
PACRG-206ENST00000542669 C11orf95C9JLR9 678 aaPredicted RBP9.45□□□□□ -0.9
PACRG-206ENST00000542669 VGFO15240 615 aaPredicted RBP9.45□□□□□ -0.9
PACRG-206ENST00000542669 CCDC7Q96M83 1385 aa9.45□□□□□ -0.9
PACRG-206ENST00000542669 SCAF11Q99590 1463 aaKnown RBP9.45□□□□□ -0.9
PACRG-206ENST00000542669 ST20-MTHFSA0A0A6YYL1 179 aa9.44□□□□□ -0.9
PACRG-206ENST00000542669 DDX10Q13206 875 aaKnown RBP9.44□□□□□ -0.9
PACRG-206ENST00000542669 CFAP70Q5T0N1 1121 aa9.44□□□□□ -0.9
PACRG-206ENST00000542669 NLRP1Q9C000 1473 aa9.44□□□□□ -0.9
PACRG-206ENST00000542669 ADGRB1O14514 1584 aa9.44□□□□□ -0.9
PACRG-206ENST00000542669 UBR1Q8IWV7 1749 aa9.44□□□□□ -0.9
PACRG-206ENST00000542669 RIMS1Q86UR5 1692 aaKnown RBP9.43□□□□□ -0.9
PACRG-206ENST00000542669 KIF7Q2M1P5 1343 aa9.43□□□□□ -0.9
PACRG-206ENST00000542669 CEBPAP49715 358 aaPredicted RBP9.43□□□□□ -0.9
PACRG-206ENST00000542669 C14orf93Q9H972 538 aaKnown RBP9.43□□□□□ -0.9
PACRG-206ENST00000542669 STAG3Q9UJ98 1225 aa9.43□□□□□ -0.9
PACRG-206ENST00000542669 RIMS2Q9UQ26 1411 aa9.42□□□□□ -0.9
PACRG-206ENST00000542669 NUTM2DQ5VT03 806 aaPredicted RBP9.41□□□□□ -0.9
PACRG-206ENST00000542669 MIER1Q8N108 512 aa9.41□□□□□ -0.9
PACRG-206ENST00000542669 TESK2Q96S53 571 aa9.41□□□□□ -0.9
PACRG-206ENST00000542669 MYO3AQ8NEV4 1616 aa9.41□□□□□ -0.9
PACRG-206ENST00000542669 ASXL1Q8IXJ9 1541 aa9.41□□□□□ -0.9
PACRG-206ENST00000542669 EIF3AQ14152 1382 aaKnown RBP9.4□□□□□ -0.9
PACRG-206ENST00000542669 TMEM2Q9UHN6 1383 aa9.39□□□□□ -0.91
PACRG-206ENST00000542669 SETD1AO15047 1707 aaKnown RBP9.39□□□□□ -0.91
PACRG-206ENST00000542669 ALKQ9UM73 1620 aa9.38□□□□□ -0.91
PACRG-206ENST00000542669 NRXN3Q9Y4C0 1643 aa9.38□□□□□ -0.91
PACRG-206ENST00000542669 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.38□□□□□ -0.91
PACRG-206ENST00000542669 ARHGAP23Q9P227 1491 aa9.38□□□□□ -0.91
PACRG-206ENST00000542669 DISP3Q9P2K9 1392 aa9.37□□□□□ -0.91
PACRG-206ENST00000542669 SLIT1O75093 1534 aa9.37□□□□□ -0.91
PACRG-206ENST00000542669 ZNF142P52746 1687 aaPredicted RBP9.37□□□□□ -0.91
PACRG-206ENST00000542669 PTPRMP28827 1452 aa9.37□□□□□ -0.91
PACRG-206ENST00000542669 TMEM132EQ6IEE7 984 aa9.37□□□□□ -0.91
PACRG-206ENST00000542669 CEP170BQ9Y4F5 1589 aaPredicted RBP9.37□□□□□ -0.91
PACRG-206ENST00000542669 SBNO2Q9Y2G9 1366 aa9.37□□□□□ -0.91
PACRG-206ENST00000542669 ARHGEF28Q8N1W1 1705 aaKnown RBP9.36□□□□□ -0.91
PACRG-206ENST00000542669 HDGFP51858 240 aaKnown RBP9.36□□□□□ -0.91
PACRG-206ENST00000542669 QRICH2Q9H0J4 1663 aa9.36□□□□□ -0.91
PACRG-206ENST00000542669 SETD1BQ9UPS6 1966 aaKnown RBP9.35□□□□□ -0.91
PACRG-206ENST00000542669 TMF1P82094 1093 aa9.35□□□□□ -0.91
PACRG-206ENST00000542669 YTHDC2Q9H6S0 1430 aaKnown RBP9.35□□□□□ -0.91
PACRG-206ENST00000542669 CENPJQ9HC77 1338 aaPredicted RBP9.34□□□□□ -0.91
PACRG-206ENST00000542669 SLC24A1O60721 1099 aa9.34□□□□□ -0.91
PACRG-206ENST00000542669 THEMISQ8N1K5 641 aaPredicted RBP9.34□□□□□ -0.91
PACRG-206ENST00000542669 TRAK1Q9UPV9 953 aa9.34□□□□□ -0.91
PACRG-206ENST00000542669 PLEKHG1Q9ULL1 1385 aa9.34□□□□□ -0.91
PACRG-206ENST00000542669 DLC1Q96QB1 1528 aa9.33□□□□□ -0.92
PACRG-206ENST00000542669 LTKP29376 864 aa9.33□□□□□ -0.92
PACRG-206ENST00000542669 C1QBPQ07021 282 aaKnown RBP9.33□□□□□ -0.92
PACRG-206ENST00000542669 POLR3GLQ9BT43 218 aa9.33□□□□□ -0.92
PACRG-206ENST00000542669 ADAMTS13Q76LX8 1427 aa9.32□□□□□ -0.92
PACRG-206ENST00000542669 ANP32CO43423 234 aa9.32□□□□□ -0.92
PACRG-206ENST00000542669 CDCA8Q53HL2 280 aa9.32□□□□□ -0.92
PACRG-206ENST00000542669 LRPPRCP42704 1394 aaKnown RBP9.32□□□□□ -0.92
PACRG-206ENST00000542669 MED14O60244 1454 aa9.32□□□□□ -0.92
PACRG-206ENST00000542669 MYOM1P52179 1685 aa9.32□□□□□ -0.92
PACRG-206ENST00000542669 KNDC1Q76NI1 1749 aa9.31□□□□□ -0.92
PACRG-206ENST00000542669 TXNDC2Q86VQ3 553 aa9.31□□□□□ -0.92
PACRG-206ENST00000542669 EID1Q9Y6B2 187 aa9.31□□□□□ -0.92
PACRG-206ENST00000542669 METP08581 1390 aa9.31□□□□□ -0.92
PACRG-206ENST00000542669 DIP2AQ14689 1571 aa9.3□□□□□ -0.92
PACRG-206ENST00000542669 ABCC11Q96J66 1382 aa9.3□□□□□ -0.92
PACRG-206ENST00000542669 STK26Q9P289 416 aa9.3□□□□□ -0.92
PACRG-206ENST00000542669 TULP4Q9NRJ4 1543 aa9.3□□□□□ -0.92
PACRG-206ENST00000542669 TECPR2O15040 1411 aa9.3□□□□□ -0.92
PACRG-206ENST00000542669 CPS1P31327 1500 aa9.29□□□□□ -0.92
PACRG-206ENST00000542669 CCER2I3L3R5 266 aa9.28□□□□□ -0.92
PACRG-206ENST00000542669 PRAM1Q96QH2 718 aa9.28□□□□□ -0.92
PACRG-206ENST00000542669 PRKRIP1Q9H875 184 aaPredicted RBP9.28□□□□□ -0.92
PACRG-206ENST00000542669 PER1O15534 1290 aaPredicted RBP9.27□□□□□ -0.93
PACRG-206ENST00000542669 POTEHQ6S545 545 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms