RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 STRCP1A6NGW2 1772 aa30.56■■■□□ 2.48
DDB1-220ENST00000542337 RIMS2Q9UQ26 1411 aa30.56■■■□□ 2.48
DDB1-220ENST00000542337 E9PCH4 1651 aa30.55■■■□□ 2.48
DDB1-220ENST00000542337 PLEKHG1Q9ULL1 1385 aa30.52■■■□□ 2.48
DDB1-220ENST00000542337 ZFYVE9O95405 1425 aa30.51■■■□□ 2.47
DDB1-220ENST00000542337 PROSER2Q86WR7 435 aaPredicted RBP30.51■■■□□ 2.47
DDB1-220ENST00000542337 SENP3Q9H4L4 574 aaPredicted RBP30.51■■■□□ 2.47
DDB1-220ENST00000542337 TMEM131LA2VDJ0 1609 aa30.51■■■□□ 2.47
DDB1-220ENST00000542337 NAIPQ13075 1403 aa30.48■■■□□ 2.47
DDB1-220ENST00000542337 TRIM52Q96A61 297 aa30.46■■■□□ 2.47
DDB1-220ENST00000542337 TMEM94Q12767 1356 aa30.45■■■□□ 2.47
DDB1-220ENST00000542337 NUTM2DQ5VT03 806 aaPredicted RBP30.45■■■□□ 2.47
DDB1-220ENST00000542337 TBX22Q9Y458 520 aa30.45■■■□□ 2.47
DDB1-220ENST00000542337 ZNF326Q5BKZ1 582 aaKnown RBP30.41■■■□□ 2.46
DDB1-220ENST00000542337 MYO5BQ9ULV0 1848 aa30.4■■■□□ 2.46
DDB1-220ENST00000542337 ALKQ9UM73 1620 aa30.4■■■□□ 2.46
DDB1-220ENST00000542337 HFM1A2PYH4 1435 aa30.4■■■□□ 2.46
DDB1-220ENST00000542337 NKTRP30414 1462 aaKnown RBP30.38■■■□□ 2.45
DDB1-220ENST00000542337 RBM33Q96EV2 1170 aaKnown RBP30.37■■■□□ 2.45
DDB1-220ENST00000542337 SLC4A1APQ9BWU0 796 aaKnown RBP30.34■■■□□ 2.45
DDB1-220ENST00000542337 MSH6P52701 1360 aa30.33■■■□□ 2.45
DDB1-220ENST00000542337 SPHKAPQ2M3C7 1700 aa30.33■■■□□ 2.45
DDB1-220ENST00000542337 NWD1Q149M9 1564 aa30.32■■■□□ 2.45
DDB1-220ENST00000542337 ILDR2Q71H61 639 aa30.32■■■□□ 2.44
DDB1-220ENST00000542337 PIK3R4Q99570 1358 aa30.31■■■□□ 2.44
DDB1-220ENST00000542337 ADAMTS13Q76LX8 1427 aa30.3■■■□□ 2.44
DDB1-220ENST00000542337 XIRP1Q702N8 1843 aaKnown RBP30.29■■■□□ 2.44
DDB1-220ENST00000542337 C14orf37Q86TY3 774 aa30.29■■■□□ 2.44
DDB1-220ENST00000542337 FAM135BQ49AJ0 1406 aa30.29■■■□□ 2.44
DDB1-220ENST00000542337 DIP2AQ14689 1571 aa30.28■■■□□ 2.44
DDB1-220ENST00000542337 TRPM2O94759 1503 aa30.26■■■□□ 2.43
DDB1-220ENST00000542337 NCOA3Q9Y6Q9 1424 aa30.24■■■□□ 2.43
DDB1-220ENST00000542337 AMOTL2Q9Y2J4 779 aa30.24■■■□□ 2.43
DDB1-220ENST00000542337 CHD2O14647 1828 aaKnown RBP30.24■■■□□ 2.43
DDB1-220ENST00000542337 SLAIN2Q9P270 581 aa30.23■■■□□ 2.43
DDB1-220ENST00000542337 PHF23Q9BUL5 403 aaPredicted RBP30.21■■■□□ 2.43
DDB1-220ENST00000542337 ACIN1Q9UKV3 1341 aaKnown RBP30.19■■■□□ 2.42
DDB1-220ENST00000542337 CLTCL1P53675 1640 aa30.18■■■□□ 2.42
DDB1-220ENST00000542337 VGFO15240 615 aaPredicted RBP30.18■■■□□ 2.42
DDB1-220ENST00000542337 C19orf44Q9H6X5 657 aa30.18■■■□□ 2.42
DDB1-220ENST00000542337 MED1Q15648 1581 aaPredicted RBP30.18■■■□□ 2.42
DDB1-220ENST00000542337 SOCS7O14512 581 aa30.17■■■□□ 2.42
DDB1-220ENST00000542337 ATF3P18847 181 aa30.17■■■□□ 2.42
DDB1-220ENST00000542337 CADPS2Q86UW7 1296 aa30.16■■■□□ 2.42
DDB1-220ENST00000542337 RPGRIP1LQ68CZ1 1315 aa30.15■■■□□ 2.42
DDB1-220ENST00000542337 SETBP1Q9Y6X0 1596 aa30.14■■■□□ 2.42
DDB1-220ENST00000542337 MPHOSPH9Q99550 1183 aa30.12■■■□□ 2.41
DDB1-220ENST00000542337 KIF1BO60333 1816 aa30.12■■■□□ 2.41
DDB1-220ENST00000542337 PTPRUQ92729 1446 aa30.12■■■□□ 2.41
DDB1-220ENST00000542337 FOXD1Q16676 465 aa30.11■■■□□ 2.41
DDB1-220ENST00000542337 NEXMIFQ5QGS0 1516 aa30.1■■■□□ 2.41
DDB1-220ENST00000542337 ROBO1Q9Y6N7 1651 aa30.09■■■□□ 2.41
DDB1-220ENST00000542337 METP08581 1390 aa30.08■■■□□ 2.41
DDB1-220ENST00000542337 NRXN3Q9Y4C0 1643 aa30.05■■■□□ 2.4
DDB1-220ENST00000542337 CCDC144AA2RUR9 1427 aa30.05■■■□□ 2.4
DDB1-220ENST00000542337 SETD5Q9C0A6 1442 aa30.04■■■□□ 2.4
DDB1-220ENST00000542337 RGL3Q3MIN7 710 aa29.99■■■□□ 2.39
DDB1-220ENST00000542337 SIPA1L2Q9P2F8 1722 aaPredicted RBP29.99■■■□□ 2.39
DDB1-220ENST00000542337 DCCP43146 1447 aa29.97■■■□□ 2.39
DDB1-220ENST00000542337 XRN1Q8IZH2 1706 aaKnown RBP29.97■■■□□ 2.39
DDB1-220ENST00000542337 JCADQ9P266 1359 aa29.95■■■□□ 2.39
DDB1-220ENST00000542337 PHLPP1O60346 1717 aa29.92■■■□□ 2.38
DDB1-220ENST00000542337 BRINP3Q76B58 766 aa29.91■■■□□ 2.38
DDB1-220ENST00000542337 ANKRD30BQ9BXX2 1392 aa29.9■■■□□ 2.38
DDB1-220ENST00000542337 ADGRL3Q9HAR2 1447 aa29.89■■■□□ 2.38
DDB1-220ENST00000542337 RAB3GAP2Q9H2M9 1393 aa29.89■■■□□ 2.37
DDB1-220ENST00000542337 SPATA31E1Q6ZUB1 1445 aa29.88■■■□□ 2.37
DDB1-220ENST00000542337 ADGRF5Q8IZF2 1346 aa29.87■■■□□ 2.37
DDB1-220ENST00000542337 PTCH1Q13635 1447 aa29.87■■■□□ 2.37
DDB1-220ENST00000542337 PPLO60437 1756 aa29.86■■■□□ 2.37
DDB1-220ENST00000542337 ROBO2Q9HCK4 1378 aa29.84■■■□□ 2.37
DDB1-220ENST00000542337 MST1RQ04912 1400 aa29.84■■■□□ 2.37
DDB1-220ENST00000542337 SPATA31A6Q5VVP1 1343 aa29.83■■■□□ 2.37
DDB1-220ENST00000542337 RGS17Q9UGC6 210 aaPredicted RBP29.83■■■□□ 2.37
DDB1-220ENST00000542337 AHDC1Q5TGY3 1603 aaPredicted RBP29.82■■■□□ 2.36
DDB1-220ENST00000542337 COL16A1Q07092 1604 aaPredicted RBP29.81■■■□□ 2.36
DDB1-220ENST00000542337 MEX3CQ5U5Q3 659 aaKnown RBP29.79■■■□□ 2.36
DDB1-220ENST00000542337 STK26Q9P289 416 aa29.79■■■□□ 2.36
DDB1-220ENST00000542337 PRAG1Q86YV5 1406 aa29.79■■■□□ 2.36
DDB1-220ENST00000542337 ASXL1Q8IXJ9 1541 aa29.78■■■□□ 2.36
DDB1-220ENST00000542337 SETD1AO15047 1707 aaKnown RBP29.77■■■□□ 2.36
DDB1-220ENST00000542337 HRCP23327 699 aa29.77■■■□□ 2.36
DDB1-220ENST00000542337 LRRC59Q96AG4 307 aaKnown RBP29.76■■■□□ 2.35
DDB1-220ENST00000542337 NALCNQ8IZF0 1738 aa29.73■■■□□ 2.35
DDB1-220ENST00000542337 C1orf167Q5SNV9 1468 aa29.73■■■□□ 2.35
DDB1-220ENST00000542337 TMEM132EQ6IEE7 984 aa29.72■■■□□ 2.35
DDB1-220ENST00000542337 LRPPRCP42704 1394 aaKnown RBP29.72■■■□□ 2.35
DDB1-220ENST00000542337 PIK3C2GO75747 1445 aa29.71■■■□□ 2.35
DDB1-220ENST00000542337 POTEAQ6S8J7 498 aa29.7■■■□□ 2.35
DDB1-220ENST00000542337 ABCC11Q96J66 1382 aa29.69■■■□□ 2.34
DDB1-220ENST00000542337 NUTM2BA6NNL0 878 aaPredicted RBP29.69■■■□□ 2.34
DDB1-220ENST00000542337 NUTM2EB1AL46 878 aaPredicted RBP29.69■■■□□ 2.34
DDB1-220ENST00000542337 NUTM2AQ8IVF1 878 aaPredicted RBP29.69■■■□□ 2.34
DDB1-220ENST00000542337 C14orf93Q9H972 538 aaKnown RBP29.69■■■□□ 2.34
DDB1-220ENST00000542337 WAPLQ7Z5K2 1190 aa29.68■■■□□ 2.34
DDB1-220ENST00000542337 DDX17Q92841 729 aaKnown RBP29.68■■■□□ 2.34
DDB1-220ENST00000542337 ORAI2Q96SN7 254 aa29.67■■■□□ 2.34
DDB1-220ENST00000542337 IFT172Q9UG01 1749 aa29.66■■■□□ 2.34
DDB1-220ENST00000542337 TECPR2O15040 1411 aa29.66■■■□□ 2.34
DDB1-220ENST00000542337 ZNF772Q68DY9 489 aaPredicted RBP29.65■■■□□ 2.34
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms