RNA–Protein interactions for RNA: ENST00000542114.1

COL6A4P2-206, Transcript of collagen type VI alpha 4 pseudogene 2, humanhuman

TSL 5

Gene COL6A4P2, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A4P2-206ENST00000542114 PPP4CP60510 307 aa9.05□□□□□ -0.96
COL6A4P2-206ENST00000542114 SLF2Q8IX21 1173 aa9.04□□□□□ -0.96
COL6A4P2-206ENST00000542114 TMEM134Q9H6X4 195 aa9.04□□□□□ -0.96
COL6A4P2-206ENST00000542114 TSR3Q9UJK0 312 aaKnown RBP9.04□□□□□ -0.96
COL6A4P2-206ENST00000542114 CCDC102AQ96A19 550 aa9.03□□□□□ -0.96
COL6A4P2-206ENST00000542114 HPS5Q9UPZ3 1129 aa9.03□□□□□ -0.96
COL6A4P2-206ENST00000542114 NECTIN2Q92692 538 aa9.01□□□□□ -0.97
COL6A4P2-206ENST00000542114 WBP1LQ9NX94 342 aa9.01□□□□□ -0.97
COL6A4P2-206ENST00000542114 NLRP7Q8WX94 980 aa9□□□□□ -0.97
COL6A4P2-206ENST00000542114 PHOX2BQ99453 314 aa9□□□□□ -0.97
COL6A4P2-206ENST00000542114 DAXXQ9UER7 740 aaPredicted RBP9□□□□□ -0.97
COL6A4P2-206ENST00000542114 NYAP1Q6ZVC0 841 aa8.99□□□□□ -0.97
COL6A4P2-206ENST00000542114 RSPH4AQ5TD94 716 aa8.98□□□□□ -0.97
COL6A4P2-206ENST00000542114 AK7Q96M32 723 aa8.97□□□□□ -0.97
COL6A4P2-206ENST00000542114 MDM2Q00987 491 aaPredicted RBP8.96□□□□□ -0.98
COL6A4P2-206ENST00000542114 SLC24A3Q9HC58 644 aa8.96□□□□□ -0.98
COL6A4P2-206ENST00000542114 DDX11L8A8MPP1 907 aa8.95□□□□□ -0.98
COL6A4P2-206ENST00000542114 SULF1Q8IWU6 871 aa8.95□□□□□ -0.98
COL6A4P2-206ENST00000542114 CLCN1P35523 988 aa8.94□□□□□ -0.98
COL6A4P2-206ENST00000542114 RDH13Q8NBN7 331 aa8.94□□□□□ -0.98
COL6A4P2-206ENST00000542114 TTLL12Q14166 644 aaPredicted RBP8.93□□□□□ -0.98
COL6A4P2-206ENST00000542114 KMT5BQ4FZB7 885 aa8.93□□□□□ -0.98
COL6A4P2-206ENST00000542114 PRR14Q9BWN1 585 aa8.93□□□□□ -0.98
COL6A4P2-206ENST00000542114 GPCPD1Q9NPB8 672 aa8.93□□□□□ -0.98
COL6A4P2-206ENST00000542114 TRIM66O15016 1216 aa8.91□□□□□ -0.98
COL6A4P2-206ENST00000542114 CFHP08603 1231 aa8.91□□□□□ -0.98
COL6A4P2-206ENST00000542114 SLC10A3P09131 477 aa8.91□□□□□ -0.98
COL6A4P2-206ENST00000542114 APLP1P51693 650 aa8.91□□□□□ -0.98
COL6A4P2-206ENST00000542114 TPRNQ4KMQ1 711 aa8.91□□□□□ -0.98
COL6A4P2-206ENST00000542114 AMHR2Q16671 573 aa8.9□□□□□ -0.98
COL6A4P2-206ENST00000542114 PLA2G2EQ9NZK7 142 aa8.88□□□□□ -0.99
COL6A4P2-206ENST00000542114 PCDHB3Q9Y5E6 796 aa8.87□□□□□ -0.99
COL6A4P2-206ENST00000542114 ACTN4O43707 911 aaKnown RBP8.86□□□□□ -0.99
COL6A4P2-206ENST00000542114 PDE4DQ08499 809 aa8.86□□□□□ -0.99
COL6A4P2-206ENST00000542114 FAM217BQ9NTX9 383 aaPredicted RBP8.86□□□□□ -0.99
COL6A4P2-206ENST00000542114 CD46P15529 392 aa8.85□□□□□ -0.99
COL6A4P2-206ENST00000542114 SSTR3P32745 418 aaPredicted RBP8.85□□□□□ -0.99
COL6A4P2-206ENST00000542114 GCGRP47871 477 aa8.85□□□□□ -0.99
COL6A4P2-206ENST00000542114 TMUB1Q9BVT8 246 aa8.85□□□□□ -0.99
COL6A4P2-206ENST00000542114 REPIN1Q9BWE0 567 aaKnown RBP8.85□□□□□ -0.99
COL6A4P2-206ENST00000542114 COPS2P61201 443 aa8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 KCNC4Q03721 635 aa8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 GIGYF2Q6Y7W6 1299 aaKnown RBP8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 PARP9Q8IXQ6 854 aa8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 MTRQ99707 1265 aa8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 IL21Q9HBE4 155 aa8.84□□□□□ -0.99
COL6A4P2-206ENST00000542114 ITGBL1O95965 494 aaPredicted RBP8.82□□□□□ -1
COL6A4P2-206ENST00000542114 FUT2Q10981 343 aa8.82□□□□□ -1
COL6A4P2-206ENST00000542114 GRIPAP1Q4V328 841 aa8.82□□□□□ -1
COL6A4P2-206ENST00000542114 TJAP1Q5JTD0 557 aa8.82□□□□□ -1
COL6A4P2-206ENST00000542114 KDM4AO75164 1064 aa8.81□□□□□ -1
COL6A4P2-206ENST00000542114 BLOC1S3Q6QNY0 202 aa8.81□□□□□ -1
COL6A4P2-206ENST00000542114 NR1I2O75469 434 aa8.8□□□□□ -1
COL6A4P2-206ENST00000542114 ATP6V1AP38606 617 aa8.8□□□□□ -1
COL6A4P2-206ENST00000542114 PUS10Q3MIT2 529 aaKnown RBP8.8□□□□□ -1
COL6A4P2-206ENST00000542114 NUTM1Q86Y26 1132 aa8.8□□□□□ -1
COL6A4P2-206ENST00000542114 ZPR1O75312 459 aa8.78□□□□□ -1
COL6A4P2-206ENST00000542114 IFFO2Q5TF58 517 aa8.78□□□□□ -1
COL6A4P2-206ENST00000542114 ZNF516Q92618 1163 aa8.78□□□□□ -1
COL6A4P2-206ENST00000542114 BEGAINQ9BUH8 593 aa8.78□□□□□ -1
COL6A4P2-206ENST00000542114 MS4A1P11836 297 aa8.77□□□□□ -1.01
COL6A4P2-206ENST00000542114 USP46P62068 366 aa8.77□□□□□ -1.01
COL6A4P2-206ENST00000542114 SCUBE3Q8IX30 993 aa8.77□□□□□ -1.01
COL6A4P2-206ENST00000542114 PRKCSHP14314 528 aaPredicted RBP8.76□□□□□ -1.01
COL6A4P2-206ENST00000542114 MORN1Q5T089 497 aa8.76□□□□□ -1.01
COL6A4P2-206ENST00000542114 GPBP1L1Q9HC44 474 aaPredicted RBP8.75□□□□□ -1.01
COL6A4P2-206ENST00000542114 NKX2-3Q8TAU0 364 aa8.74□□□□□ -1.01
COL6A4P2-206ENST00000542114 SLC27A5Q9Y2P5 690 aa8.74□□□□□ -1.01
COL6A4P2-206ENST00000542114 DIXDC1Q155Q3 683 aa8.73□□□□□ -1.01
COL6A4P2-206ENST00000542114 NEUROD2Q15784 382 aa8.73□□□□□ -1.01
COL6A4P2-206ENST00000542114 SPIRE2Q8WWL2 714 aa8.73□□□□□ -1.01
COL6A4P2-206ENST00000542114 KDM4CQ9H3R0 1056 aa8.73□□□□□ -1.01
COL6A4P2-206ENST00000542114 HOXA2O43364 376 aa8.72□□□□□ -1.01
COL6A4P2-206ENST00000542114 A0A0G2JS52 829 aa8.71□□□□□ -1.02
COL6A4P2-206ENST00000542114 TLL1O43897 1013 aa8.71□□□□□ -1.02
COL6A4P2-206ENST00000542114 FMNL1O95466 1100 aaPredicted RBP8.71□□□□□ -1.02
COL6A4P2-206ENST00000542114 Q3C1V9 767 aa8.71□□□□□ -1.02
COL6A4P2-206ENST00000542114 TBC1D2Q9BYX2 928 aa8.71□□□□□ -1.02
COL6A4P2-206ENST00000542114 GGCXP38435 758 aa8.7□□□□□ -1.02
COL6A4P2-206ENST00000542114 SPSB2Q99619 263 aa8.7□□□□□ -1.02
COL6A4P2-206ENST00000542114 ADH1BP00325 375 aa8.69□□□□□ -1.02
COL6A4P2-206ENST00000542114 HLA-CQ95604 372 aa8.69□□□□□ -1.02
COL6A4P2-206ENST00000542114 SALL2Q9Y467 1007 aaPredicted RBP8.69□□□□□ -1.02
COL6A4P2-206ENST00000542114 MOXD2PA6NHM9 499 aa8.68□□□□□ -1.02
COL6A4P2-206ENST00000542114 FDX1P10109 184 aa8.68□□□□□ -1.02
COL6A4P2-206ENST00000542114 NDUFV2P19404 249 aa8.68□□□□□ -1.02
COL6A4P2-206ENST00000542114 GUCA2AQ02747 115 aa8.68□□□□□ -1.02
COL6A4P2-206ENST00000542114 DDRGK1Q96HY6 314 aa8.68□□□□□ -1.02
COL6A4P2-206ENST00000542114 PPP1R18Q6NYC8 613 aa8.67□□□□□ -1.02
COL6A4P2-206ENST00000542114 BRICD5Q6PL45 260 aa8.67□□□□□ -1.02
COL6A4P2-206ENST00000542114 SLC6A16Q9GZN6 736 aa8.67□□□□□ -1.02
COL6A4P2-206ENST00000542114 RSPH6AQ9H0K4 717 aa8.67□□□□□ -1.02
COL6A4P2-206ENST00000542114 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.67□□□□□ -1.02
COL6A4P2-206ENST00000542114 RNF19BQ6ZMZ0 732 aa8.66□□□□□ -1.02
COL6A4P2-206ENST00000542114 THAP11Q96EK4 314 aa8.66□□□□□ -1.02
COL6A4P2-206ENST00000542114 FAM117AQ9C073 453 aa8.66□□□□□ -1.02
COL6A4P2-206ENST00000542114 BRPF1P55201 1214 aaPredicted RBP8.65□□□□□ -1.02
COL6A4P2-206ENST00000542114 RIC3Q7Z5B4 369 aa8.65□□□□□ -1.02
COL6A4P2-206ENST00000542114 C6orf229H3BNL8 230 aa8.64□□□□□ -1.03
COL6A4P2-206ENST00000542114 S1PR4O95977 384 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms