RNA–Protein interactions for RNA: ENST00000541802.1

C12orf56-204, Transcript of chromosome 12 open reading frame 56, humanhuman

TSL 3

Gene C12orf56, Length 716 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C12orf56-204ENST00000541802 GPBP1L1Q9HC44 474 aaPredicted RBP12.53□□□□□ -0.4
C12orf56-204ENST00000541802 TTLL12Q14166 644 aaPredicted RBP12.52□□□□□ -0.41
C12orf56-204ENST00000541802 ANKK1Q8NFD2 765 aa12.52□□□□□ -0.41
C12orf56-204ENST00000541802 EYA1Q99502 592 aa12.52□□□□□ -0.41
C12orf56-204ENST00000541802 RABGEF1Q9UJ41 708 aa12.52□□□□□ -0.41
C12orf56-204ENST00000541802 MDM2Q00987 491 aaPredicted RBP12.5□□□□□ -0.41
C12orf56-204ENST00000541802 SEPT9Q9UHD8 586 aaPredicted RBP12.49□□□□□ -0.41
C12orf56-204ENST00000541802 RCCD1A6NED2 376 aa12.48□□□□□ -0.41
C12orf56-204ENST00000541802 PARP9Q8IXQ6 854 aa12.48□□□□□ -0.41
C12orf56-204ENST00000541802 KDM4CQ9H3R0 1056 aa12.48□□□□□ -0.41
C12orf56-204ENST00000541802 BCAMP50895 628 aa12.47□□□□□ -0.41
C12orf56-204ENST00000541802 REPIN1Q9BWE0 567 aaKnown RBP12.47□□□□□ -0.41
C12orf56-204ENST00000541802 CLCN1P35523 988 aa12.45□□□□□ -0.42
C12orf56-204ENST00000541802 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP12.44□□□□□ -0.42
C12orf56-204ENST00000541802 KCNC4Q03721 635 aa12.44□□□□□ -0.42
C12orf56-204ENST00000541802 GIGYF2Q6Y7W6 1299 aaKnown RBP12.44□□□□□ -0.42
C12orf56-204ENST00000541802 NYAP1Q6ZVC0 841 aa12.44□□□□□ -0.42
C12orf56-204ENST00000541802 GPCPD1Q9NPB8 672 aa12.44□□□□□ -0.42
C12orf56-204ENST00000541802 SOWAHBA6NEL2 793 aa12.43□□□□□ -0.42
C12orf56-204ENST00000541802 LAPTM4AQ15012 233 aa12.43□□□□□ -0.42
C12orf56-204ENST00000541802 DNAJB2P25686 324 aa12.42□□□□□ -0.42
C12orf56-204ENST00000541802 TMUB1Q9BVT8 246 aa12.42□□□□□ -0.42
C12orf56-204ENST00000541802 FAM98CQ17RN3 349 aaKnown RBP12.4□□□□□ -0.42
C12orf56-204ENST00000541802 LAPTM4BQ86VI4 370 aa12.4□□□□□ -0.42
C12orf56-204ENST00000541802 LCE2BO14633 110 aa12.39□□□□□ -0.43
C12orf56-204ENST00000541802 TRAF7Q6Q0C0 670 aa12.39□□□□□ -0.43
C12orf56-204ENST00000541802 TMEM134Q9H6X4 195 aa12.39□□□□□ -0.43
C12orf56-204ENST00000541802 WBP1LQ9NX94 342 aa12.38□□□□□ -0.43
C12orf56-204ENST00000541802 DAXXQ9UER7 740 aaPredicted RBP12.38□□□□□ -0.43
C12orf56-204ENST00000541802 MS4A1P11836 297 aa12.37□□□□□ -0.43
C12orf56-204ENST00000541802 SSTR3P32745 418 aaPredicted RBP12.37□□□□□ -0.43
C12orf56-204ENST00000541802 IL27Q8NEV9 243 aa12.37□□□□□ -0.43
C12orf56-204ENST00000541802 ZFRQ96KR1 1074 aaKnown RBP12.37□□□□□ -0.43
C12orf56-204ENST00000541802 FAM117AQ9C073 453 aa12.37□□□□□ -0.43
C12orf56-204ENST00000541802 GFRA3O60609 400 aa12.36□□□□□ -0.43
C12orf56-204ENST00000541802 FAM217BQ9NTX9 383 aaPredicted RBP12.36□□□□□ -0.43
C12orf56-204ENST00000541802 SWT1Q5T5J6 900 aaKnown RBP12.35□□□□□ -0.43
C12orf56-204ENST00000541802 HDGFP51858 240 aaKnown RBP12.34□□□□□ -0.43
C12orf56-204ENST00000541802 SAMD7Q7Z3H4 446 aa12.34□□□□□ -0.43
C12orf56-204ENST00000541802 DDX11L8A8MPP1 907 aa12.33□□□□□ -0.44
C12orf56-204ENST00000541802 SULF1Q8IWU6 871 aa12.3□□□□□ -0.44
C12orf56-204ENST00000541802 RNF40O75150 1001 aa12.29□□□□□ -0.44
C12orf56-204ENST00000541802 TMEM132AQ24JP5 1023 aa12.29□□□□□ -0.44
C12orf56-204ENST00000541802 DDRGK1Q96HY6 314 aa12.29□□□□□ -0.44
C12orf56-204ENST00000541802 BEGAINQ9BUH8 593 aa12.29□□□□□ -0.44
C12orf56-204ENST00000541802 PLEKHG3A1L390 1219 aa12.28□□□□□ -0.44
C12orf56-204ENST00000541802 RDH13Q8NBN7 331 aa12.28□□□□□ -0.44
C12orf56-204ENST00000541802 TSR3Q9UJK0 312 aaKnown RBP12.27□□□□□ -0.45
C12orf56-204ENST00000541802 CD46P15529 392 aa12.26□□□□□ -0.45
C12orf56-204ENST00000541802 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
C12orf56-204ENST00000541802 SLC10A3P09131 477 aa12.25□□□□□ -0.45
C12orf56-204ENST00000541802 SLC4A3P48751 1232 aa12.25□□□□□ -0.45
C12orf56-204ENST00000541802 RSPH4AQ5TD94 716 aa12.25□□□□□ -0.45
C12orf56-204ENST00000541802 SLF2Q8IX21 1173 aa12.25□□□□□ -0.45
C12orf56-204ENST00000541802 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.25□□□□□ -0.45
C12orf56-204ENST00000541802 HPS5Q9UPZ3 1129 aa12.25□□□□□ -0.45
C12orf56-204ENST00000541802 NRG2O14511 850 aaPredicted RBP12.23□□□□□ -0.45
C12orf56-204ENST00000541802 PRKD2Q9BZL6 878 aa12.21□□□□□ -0.45
C12orf56-204ENST00000541802 GCGRP47871 477 aa12.18□□□□□ -0.46
C12orf56-204ENST00000541802 NUTM1Q86Y26 1132 aa12.18□□□□□ -0.46
C12orf56-204ENST00000541802 TBC1D2Q9BYX2 928 aa12.18□□□□□ -0.46
C12orf56-204ENST00000541802 CFHP08603 1231 aa12.17□□□□□ -0.46
C12orf56-204ENST00000541802 ZNF787Q6DD87 383 aa12.17□□□□□ -0.46
C12orf56-204ENST00000541802 SPIRE2Q8WWL2 714 aa12.17□□□□□ -0.46
C12orf56-204ENST00000541802 PPP4CP60510 307 aa12.16□□□□□ -0.46
C12orf56-204ENST00000541802 RSPH6AQ9H0K4 717 aa12.15□□□□□ -0.46
C12orf56-204ENST00000541802 KDM4AO75164 1064 aa12.14□□□□□ -0.47
C12orf56-204ENST00000541802 TJAP1Q5JTD0 557 aa12.14□□□□□ -0.47
C12orf56-204ENST00000541802 MYSM1Q5VVJ2 828 aa12.14□□□□□ -0.47
C12orf56-204ENST00000541802 POLR3EQ9NVU0 708 aa12.14□□□□□ -0.47
C12orf56-204ENST00000541802 DIXDC1Q155Q3 683 aa12.12□□□□□ -0.47
C12orf56-204ENST00000541802 SH3D19Q5HYK7 790 aa12.12□□□□□ -0.47
C12orf56-204ENST00000541802 NECTIN2Q92692 538 aa12.12□□□□□ -0.47
C12orf56-204ENST00000541802 ATP1B4Q9UN42 357 aaPredicted RBP12.12□□□□□ -0.47
C12orf56-204ENST00000541802 V9GY48 417 aaPredicted RBP12.12□□□□□ -0.47
C12orf56-204ENST00000541802 MOXD2PA6NHM9 499 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 NDUFV2P19404 249 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 FUT2Q10981 343 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 SKIV2LQ15477 1246 aaKnown RBP12.1□□□□□ -0.47
C12orf56-204ENST00000541802 KMT5BQ4FZB7 885 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 PPP1R18Q6NYC8 613 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 GOPCQ9HD26 462 aa12.1□□□□□ -0.47
C12orf56-204ENST00000541802 APLP1P51693 650 aa12.09□□□□□ -0.47
C12orf56-204ENST00000541802 USP46P62068 366 aa12.08□□□□□ -0.48
C12orf56-204ENST00000541802 RIC3Q7Z5B4 369 aa12.08□□□□□ -0.48
C12orf56-204ENST00000541802 PROCA1Q8NCQ7 364 aaPredicted RBP12.08□□□□□ -0.48
C12orf56-204ENST00000541802 ZNF775Q96BV0 537 aaPredicted RBP12.08□□□□□ -0.48
C12orf56-204ENST00000541802 PCMTD1Q96MG8 357 aaPredicted RBP12.08□□□□□ -0.48
C12orf56-204ENST00000541802 HOXA2O43364 376 aa12.07□□□□□ -0.48
C12orf56-204ENST00000541802 HLA-CQ95604 372 aa12.07□□□□□ -0.48
C12orf56-204ENST00000541802 LIMD1Q9UGP4 676 aa12.07□□□□□ -0.48
C12orf56-204ENST00000541802 ACTN4O43707 911 aaKnown RBP12.06□□□□□ -0.48
C12orf56-204ENST00000541802 CLK2P49760 499 aaKnown RBP12.06□□□□□ -0.48
C12orf56-204ENST00000541802 MTRQ99707 1265 aa12.06□□□□□ -0.48
C12orf56-204ENST00000541802 IL21Q9HBE4 155 aa12.06□□□□□ -0.48
C12orf56-204ENST00000541802 PDZRN3Q9UPQ7 1066 aa12.06□□□□□ -0.48
C12orf56-204ENST00000541802 ATP6V1AP38606 617 aa12.05□□□□□ -0.48
C12orf56-204ENST00000541802 GUCA2AQ02747 115 aa12.05□□□□□ -0.48
C12orf56-204ENST00000541802 PUS10Q3MIT2 529 aaKnown RBP12.05□□□□□ -0.48
C12orf56-204ENST00000541802 RSBN1LQ6PCB5 846 aaPredicted RBP12.05□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms