RNA–Protein interactions for RNA: ENST00000541795.1

RAB6A-208, Transcript of RAB6A, member RAS oncogene family, humanhuman

TSL 2

Gene RAB6A, Length 1,812 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB6A-208ENST00000541795 NBPF1Q3BBV0 1214 aa24.83■■□□□ 1.57
RAB6A-208ENST00000541795 NRXN1Q9ULB1 1477 aa24.83■■□□□ 1.56
RAB6A-208ENST00000541795 NEXMIFQ5QGS0 1516 aa24.81■■□□□ 1.56
RAB6A-208ENST00000541795 POLR1AO95602 1720 aaPredicted RBP24.81■■□□□ 1.56
RAB6A-208ENST00000541795 ADGRF5Q8IZF2 1346 aa24.81■■□□□ 1.56
RAB6A-208ENST00000541795 C3P01024 1663 aa24.77■■□□□ 1.56
RAB6A-208ENST00000541795 DDX10Q13206 875 aaKnown RBP24.76■■□□□ 1.55
RAB6A-208ENST00000541795 TNRQ92752 1358 aa24.75■■□□□ 1.55
RAB6A-208ENST00000541795 WASHC2AQ641Q2 1341 aa24.75■■□□□ 1.55
RAB6A-208ENST00000541795 PIK3C2GO75747 1445 aa24.75■■□□□ 1.55
RAB6A-208ENST00000541795 IQGAP1P46940 1657 aa24.74■■□□□ 1.55
RAB6A-208ENST00000541795 STAG3Q9UJ98 1225 aa24.74■■□□□ 1.55
RAB6A-208ENST00000541795 ST20-MTHFSA0A0A6YYL1 179 aa24.72■■□□□ 1.55
RAB6A-208ENST00000541795 CCDC7Q96M83 1385 aa24.71■■□□□ 1.55
RAB6A-208ENST00000541795 A2ML1A8K2U0 1454 aa24.71■■□□□ 1.55
RAB6A-208ENST00000541795 C11orf95C9JLR9 678 aaPredicted RBP24.71■■□□□ 1.55
RAB6A-208ENST00000541795 VGFO15240 615 aaPredicted RBP24.71■■□□□ 1.55
RAB6A-208ENST00000541795 ZFYVE9O95405 1425 aa24.7■■□□□ 1.55
RAB6A-208ENST00000541795 CFAP70Q5T0N1 1121 aa24.7■■□□□ 1.55
RAB6A-208ENST00000541795 SETBP1Q9Y6X0 1596 aa24.69■■□□□ 1.54
RAB6A-208ENST00000541795 NUTM2DQ5VT03 806 aaPredicted RBP24.68■■□□□ 1.54
RAB6A-208ENST00000541795 SCAF11Q99590 1463 aaKnown RBP24.68■■□□□ 1.54
RAB6A-208ENST00000541795 KDM5AP29375 1690 aaKnown RBP24.68■■□□□ 1.54
RAB6A-208ENST00000541795 KIF7Q2M1P5 1343 aa24.67■■□□□ 1.54
RAB6A-208ENST00000541795 RIMS1Q86UR5 1692 aaKnown RBP24.67■■□□□ 1.54
RAB6A-208ENST00000541795 CEBPAP49715 358 aaPredicted RBP24.67■■□□□ 1.54
RAB6A-208ENST00000541795 MIER1Q8N108 512 aa24.66■■□□□ 1.54
RAB6A-208ENST00000541795 ADAMTSL3P82987 1691 aa24.65■■□□□ 1.54
RAB6A-208ENST00000541795 C14orf93Q9H972 538 aaKnown RBP24.65■■□□□ 1.54
RAB6A-208ENST00000541795 UBR1Q8IWV7 1749 aa24.65■■□□□ 1.54
RAB6A-208ENST00000541795 NLRP1Q9C000 1473 aa24.65■■□□□ 1.54
RAB6A-208ENST00000541795 RIMS2Q9UQ26 1411 aa24.62■■□□□ 1.53
RAB6A-208ENST00000541795 ADGRB1O14514 1584 aa24.61■■□□□ 1.53
RAB6A-208ENST00000541795 EIF3AQ14152 1382 aaKnown RBP24.61■■□□□ 1.53
RAB6A-208ENST00000541795 PLPPR3Q6T4P5 718 aa24.6■■□□□ 1.53
RAB6A-208ENST00000541795 TESK2Q96S53 571 aa24.58■■□□□ 1.53
RAB6A-208ENST00000541795 MYO3AQ8NEV4 1616 aa24.56■■□□□ 1.52
RAB6A-208ENST00000541795 POLR3GLQ9BT43 218 aa24.55■■□□□ 1.52
RAB6A-208ENST00000541795 ABCF1Q8NE71 845 aaKnown RBP eCLIP24.54■■□□□ 1.52
RAB6A-208ENST00000541795 ALKQ9UM73 1620 aa24.52■■□□□ 1.52
RAB6A-208ENST00000541795 TMEM132EQ6IEE7 984 aa24.52■■□□□ 1.52
RAB6A-208ENST00000541795 ASXL1Q8IXJ9 1541 aa24.52■■□□□ 1.52
RAB6A-208ENST00000541795 TMEM2Q9UHN6 1383 aa24.52■■□□□ 1.52
RAB6A-208ENST00000541795 DISP3Q9P2K9 1392 aa24.51■■□□□ 1.51
RAB6A-208ENST00000541795 TMF1P82094 1093 aa24.51■■□□□ 1.51
RAB6A-208ENST00000541795 HDGFP51858 240 aaKnown RBP24.5■■□□□ 1.51
RAB6A-208ENST00000541795 SENP3Q9H4L4 574 aaPredicted RBP24.5■■□□□ 1.51
RAB6A-208ENST00000541795 ARHGEF28Q8N1W1 1705 aaKnown RBP24.49■■□□□ 1.51
RAB6A-208ENST00000541795 SETD1AO15047 1707 aaKnown RBP24.48■■□□□ 1.51
RAB6A-208ENST00000541795 TRAK1Q9UPV9 953 aa24.48■■□□□ 1.51
RAB6A-208ENST00000541795 NRXN3Q9Y4C0 1643 aa24.48■■□□□ 1.51
RAB6A-208ENST00000541795 ANP32CO43423 234 aa24.47■■□□□ 1.51
RAB6A-208ENST00000541795 QRICH2Q9H0J4 1663 aa24.46■■□□□ 1.51
RAB6A-208ENST00000541795 CEP170BQ9Y4F5 1589 aaPredicted RBP24.45■■□□□ 1.51
RAB6A-208ENST00000541795 SLIT1O75093 1534 aa24.45■■□□□ 1.5
RAB6A-208ENST00000541795 CENPJQ9HC77 1338 aaPredicted RBP24.44■■□□□ 1.5
RAB6A-208ENST00000541795 PTPRMP28827 1452 aa24.44■■□□□ 1.5
RAB6A-208ENST00000541795 SBNO2Q9Y2G9 1366 aa24.44■■□□□ 1.5
RAB6A-208ENST00000541795 ARHGAP23Q9P227 1491 aa24.43■■□□□ 1.5
RAB6A-208ENST00000541795 ZNF142P52746 1687 aaPredicted RBP24.43■■□□□ 1.5
RAB6A-208ENST00000541795 SLC24A1O60721 1099 aa24.42■■□□□ 1.5
RAB6A-208ENST00000541795 YTHDC2Q9H6S0 1430 aaKnown RBP24.42■■□□□ 1.5
RAB6A-208ENST00000541795 SETD1BQ9UPS6 1966 aaKnown RBP24.4■■□□□ 1.5
RAB6A-208ENST00000541795 CDCA8Q53HL2 280 aa24.4■■□□□ 1.5
RAB6A-208ENST00000541795 THEMISQ8N1K5 641 aaPredicted RBP24.4■■□□□ 1.5
RAB6A-208ENST00000541795 STK26Q9P289 416 aa24.38■■□□□ 1.49
RAB6A-208ENST00000541795 EID1Q9Y6B2 187 aa24.38■■□□□ 1.49
RAB6A-208ENST00000541795 PLEKHG1Q9ULL1 1385 aa24.38■■□□□ 1.49
RAB6A-208ENST00000541795 LTKP29376 864 aa24.38■■□□□ 1.49
RAB6A-208ENST00000541795 TXNDC2Q86VQ3 553 aa24.37■■□□□ 1.49
RAB6A-208ENST00000541795 BCANQ96GW7 911 aa24.35■■□□□ 1.49
RAB6A-208ENST00000541795 LRPPRCP42704 1394 aaKnown RBP24.34■■□□□ 1.49
RAB6A-208ENST00000541795 DLC1Q96QB1 1528 aa24.33■■□□□ 1.49
RAB6A-208ENST00000541795 MYOM1P52179 1685 aa24.33■■□□□ 1.49
RAB6A-208ENST00000541795 ADAMTS13Q76LX8 1427 aa24.33■■□□□ 1.49
RAB6A-208ENST00000541795 METP08581 1390 aa24.32■■□□□ 1.48
RAB6A-208ENST00000541795 KNDC1Q76NI1 1749 aa24.31■■□□□ 1.48
RAB6A-208ENST00000541795 CCER2I3L3R5 266 aa24.29■■□□□ 1.48
RAB6A-208ENST00000541795 ABCC11Q96J66 1382 aa24.29■■□□□ 1.48
RAB6A-208ENST00000541795 PRAM1Q96QH2 718 aa24.28■■□□□ 1.48
RAB6A-208ENST00000541795 PRKRIP1Q9H875 184 aaPredicted RBP24.28■■□□□ 1.48
RAB6A-208ENST00000541795 MED14O60244 1454 aa24.28■■□□□ 1.48
RAB6A-208ENST00000541795 TULP4Q9NRJ4 1543 aa24.28■■□□□ 1.48
RAB6A-208ENST00000541795 SAFB2Q14151 953 aaKnown RBP eCLIP24.27■■□□□ 1.48
RAB6A-208ENST00000541795 POGKQ9P215 609 aa24.27■■□□□ 1.48
RAB6A-208ENST00000541795 DIP2AQ14689 1571 aa24.26■■□□□ 1.47
RAB6A-208ENST00000541795 PANK3Q9H999 370 aa24.25■■□□□ 1.47
RAB6A-208ENST00000541795 EVC2Q86UK5 1308 aa24.25■■□□□ 1.47
RAB6A-208ENST00000541795 TECPR2O15040 1411 aa24.25■■□□□ 1.47
RAB6A-208ENST00000541795 CPS1P31327 1500 aa24.24■■□□□ 1.47
RAB6A-208ENST00000541795 SLC26A8Q96RN1 970 aa24.21■■□□□ 1.47
RAB6A-208ENST00000541795 PER1O15534 1290 aaPredicted RBP24.21■■□□□ 1.47
RAB6A-208ENST00000541795 MINK1Q8N4C8 1332 aaPredicted RBP24.2■■□□□ 1.46
RAB6A-208ENST00000541795 FAM135BQ49AJ0 1406 aa24.2■■□□□ 1.46
RAB6A-208ENST00000541795 ANKLE2Q86XL3 938 aa24.19■■□□□ 1.46
RAB6A-208ENST00000541795 PUS7Q96PZ0 661 aaKnown RBP24.19■■□□□ 1.46
RAB6A-208ENST00000541795 TBX22Q9Y458 520 aa24.19■■□□□ 1.46
RAB6A-208ENST00000541795 PLEKHH1Q9ULM0 1364 aa24.19■■□□□ 1.46
RAB6A-208ENST00000541795 WAPLQ7Z5K2 1190 aa24.19■■□□□ 1.46
RAB6A-208ENST00000541795 YTHDC1Q96MU7 727 aaKnown RBP24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms