RNA–Protein interactions for RNA: ENST00000541615.5

SNHG1-218, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5 BASIC

Gene SNHG1, Length 748 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-218ENST00000541615 PRDM10Q9NQV6 1147 aa6.6□□□□□ -1.35
SNHG1-218ENST00000541615 TTC36A6NLP5 189 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 NBPF11Q86T75 865 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 MICALL2Q8IY33 904 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 GPATCH11Q8N954 259 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 DCAF11Q8TEB1 546 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 KCNG1Q9UIX4 513 aa6.59□□□□□ -1.35
SNHG1-218ENST00000541615 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP6.58□□□□□ -1.36
SNHG1-218ENST00000541615 RIMBP2O15034 1052 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 SSR1P43307 286 aaKnown RBP6.58□□□□□ -1.36
SNHG1-218ENST00000541615 MRE11P49959 708 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 ANAPC15P60006 121 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 CSPP1Q1MSJ5 1256 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 NBPF1Q3BBV0 1214 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 CASC1Q6TDU7 716 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 CARD10Q9BWT7 1032 aa6.58□□□□□ -1.36
SNHG1-218ENST00000541615 ZSCAN20P17040 1043 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-218ENST00000541615 ZSWIM6Q9HCJ5 1215 aa6.57□□□□□ -1.36
SNHG1-218ENST00000541615 ZHX1Q9UKY1 873 aaPredicted RBP6.57□□□□□ -1.36
SNHG1-218ENST00000541615 IGSF3O75054 1194 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 OFD1O75665 1012 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 KIAA1211Q6ZU35 1233 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 CREBRFQ8IUR6 639 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 SUGP2Q8IX01 1082 aaKnown RBP eCLIP6.56□□□□□ -1.36
SNHG1-218ENST00000541615 MYH16Q9H6N6 1097 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 BSDC1Q9NW68 430 aaPredicted RBP6.56□□□□□ -1.36
SNHG1-218ENST00000541615 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
SNHG1-218ENST00000541615 ABCC9O60706 1549 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 NCAPD3P42695 1498 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 OS9Q13438 667 aaPredicted RBP6.55□□□□□ -1.36
SNHG1-218ENST00000541615 NBPF9Q3BBW0 867 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 HS1BP3Q53T59 392 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 TMEM92Q6UXU6 159 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 MS4A4AQ96JQ5 239 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 KIF3AQ9Y496 699 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 PHLDB1Q86UU1 1377 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 NINLQ9Y2I6 1382 aa6.55□□□□□ -1.36
SNHG1-218ENST00000541615 ERBB3P21860 1342 aa6.54□□□□□ -1.36
SNHG1-218ENST00000541615 ZBED9Q6R2W3 1325 aa6.54□□□□□ -1.36
SNHG1-218ENST00000541615 LMOD3Q0VAK6 560 aa6.54□□□□□ -1.36
SNHG1-218ENST00000541615 EGFL6Q8IUX8 553 aa6.54□□□□□ -1.36
SNHG1-218ENST00000541615 UBTFP17480 764 aaKnown RBP6.53□□□□□ -1.36
SNHG1-218ENST00000541615 SATB1Q01826 763 aa6.53□□□□□ -1.36
SNHG1-218ENST00000541615 MNS1Q8NEH6 495 aa6.53□□□□□ -1.36
SNHG1-218ENST00000541615 BACH2Q9BYV9 841 aa6.53□□□□□ -1.36
SNHG1-218ENST00000541615 TERF2IPQ9NYB0 399 aa6.53□□□□□ -1.36
SNHG1-218ENST00000541615 PHF8Q9UPP1 1060 aa6.53□□□□□ -1.36
SNHG1-218ENST00000541615 FSD2A1L4K1 749 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 VGLL3A8MV65 326 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 NRDCO43847 1150 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 KIF1CO43896 1103 aaKnown RBP6.52□□□□□ -1.37
SNHG1-218ENST00000541615 MFAP1P55081 439 aaKnown RBP6.52□□□□□ -1.37
SNHG1-218ENST00000541615 BECN1Q14457 450 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 FAM43BQ6ZT52 329 aaPredicted RBP6.52□□□□□ -1.37
SNHG1-218ENST00000541615 TIGD1Q96MW7 591 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 CALCOCO1Q9P1Z2 691 aa6.52□□□□□ -1.37
SNHG1-218ENST00000541615 ZCCHC6Q5VYS8 1495 aaKnown RBP6.52□□□□□ -1.37
SNHG1-218ENST00000541615 PDE4AP27815 886 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 MCM5P33992 734 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 NLRP6P59044 892 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 ZKSCAN8Q15776 578 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-218ENST00000541615 B4GALNT3Q6L9W6 998 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 GPR153Q6NV75 609 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 BANK1Q8NDB2 785 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 MYCBPQ99417 103 aaPredicted RBP6.51□□□□□ -1.37
SNHG1-218ENST00000541615 BRMS1Q9HCU9 246 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 FAM13BQ9NYF5 915 aa6.51□□□□□ -1.37
SNHG1-218ENST00000541615 MSNP26038 577 aaKnown RBP6.5□□□□□ -1.37
SNHG1-218ENST00000541615 MAP2K1Q02750 393 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-218ENST00000541615 GABPB1Q06547 395 aaPredicted RBP6.5□□□□□ -1.37
SNHG1-218ENST00000541615 VARS2Q5ST30 1063 aaKnown RBP6.5□□□□□ -1.37
SNHG1-218ENST00000541615 FBXO22Q8NEZ5 403 aa6.5□□□□□ -1.37
SNHG1-218ENST00000541615 TRIM52Q96A61 297 aa6.5□□□□□ -1.37
SNHG1-218ENST00000541615 XRCC6P12956 609 aaKnown RBP eCLIP6.49□□□□□ -1.37
SNHG1-218ENST00000541615 SETDB1Q15047 1291 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 NBPF6Q5VWK0 638 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 NBPF10Q6P3W6 841 aaKnown RBP6.49□□□□□ -1.37
SNHG1-218ENST00000541615 ZSCAN30Q86W11 494 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 NBPF5PQ86XG9 351 aaPredicted RBP6.49□□□□□ -1.37
SNHG1-218ENST00000541615 CERS3Q8IU89 383 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 ZNF687Q8N1G0 1237 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 OTUD6BQ8N6M0 293 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 NBPF4Q96M43 638 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 SLC52A1Q9NWF4 448 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 CEP83Q9Y592 693 aa6.49□□□□□ -1.37
SNHG1-218ENST00000541615 RIPK4P57078 832 aa6.48□□□□□ -1.37
SNHG1-218ENST00000541615 HMGN5P82970 282 aaKnown RBP6.48□□□□□ -1.37
SNHG1-218ENST00000541615 CCDC173Q0VFZ6 552 aa6.48□□□□□ -1.37
SNHG1-218ENST00000541615 FEZ1Q99689 392 aa6.48□□□□□ -1.37
SNHG1-218ENST00000541615 KNSTRNQ9Y448 316 aa6.48□□□□□ -1.37
SNHG1-218ENST00000541615 GOLIM4O00461 696 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 CCDC172P0C7W6 258 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 NEFHP12036 1026 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 TNNT3P45378 269 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-218ENST00000541615 HNRNPUQ00839 825 aaKnown RBP eCLIP6.47□□□□□ -1.37
SNHG1-218ENST00000541615 TMED8Q6PL24 325 aaPredicted RBP6.47□□□□□ -1.37
SNHG1-218ENST00000541615 PDCL2Q8N4E4 241 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 FAM210AQ96ND0 272 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 NCAPGQ9BPX3 1015 aa6.47□□□□□ -1.37
SNHG1-218ENST00000541615 PAIP2Q9BPZ3 127 aaKnown RBP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms