RNA–Protein interactions for RNA: ENST00000541478.5

OTUB1-210, Transcript of OTU deubiquitinase, ubiquitin aldehyde binding 1, humanhuman

TSL 5 BASIC

Gene OTUB1, Length 1,803 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
OTUB1-210ENST00000541478 TMF1P82094 1093 aa27.69■■■□□ 2.02
OTUB1-210ENST00000541478 CFAP65Q6ZU64 1925 aaKnown RBP27.69■■■□□ 2.02
OTUB1-210ENST00000541478 PIK3C2BO00750 1634 aa27.69■■■□□ 2.02
OTUB1-210ENST00000541478 SIGLEC1Q9BZZ2 1709 aa27.68■■■□□ 2.02
OTUB1-210ENST00000541478 RPGRIP1LQ68CZ1 1315 aa27.68■■■□□ 2.02
OTUB1-210ENST00000541478 CHGAP10645 457 aaKnown RBP27.67■■■□□ 2.02
OTUB1-210ENST00000541478 PPP6R1Q9UPN7 881 aa27.67■■■□□ 2.02
OTUB1-210ENST00000541478 SYNMO15061 1565 aa27.66■■■□□ 2.02
OTUB1-210ENST00000541478 ADGRF5Q8IZF2 1346 aa27.64■■■□□ 2.02
OTUB1-210ENST00000541478 PPLO60437 1756 aa27.64■■■□□ 2.01
OTUB1-210ENST00000541478 DISP3Q9P2K9 1392 aa27.63■■■□□ 2.01
OTUB1-210ENST00000541478 ARHGEF40Q8TER5 1519 aa27.63■■■□□ 2.01
OTUB1-210ENST00000541478 KTN1Q86UP2 1357 aaKnown RBP27.62■■■□□ 2.01
OTUB1-210ENST00000541478 SLC52A1Q9NWF4 448 aa27.62■■■□□ 2.01
OTUB1-210ENST00000541478 MRS2Q9HD23 443 aa27.6■■■□□ 2.01
OTUB1-210ENST00000541478 SLC24A1O60721 1099 aa27.6■■■□□ 2.01
OTUB1-210ENST00000541478 PREX1Q8TCU6 1659 aa27.59■■■□□ 2.01
OTUB1-210ENST00000541478 CDCA8Q53HL2 280 aa27.59■■■□□ 2.01
OTUB1-210ENST00000541478 SETBP1Q9Y6X0 1596 aa27.58■■■□□ 2.01
OTUB1-210ENST00000541478 CFAP70Q5T0N1 1121 aa27.58■■■□□ 2.01
OTUB1-210ENST00000541478 PIK3C2GO75747 1445 aa27.58■■■□□ 2.01
OTUB1-210ENST00000541478 CCDC184Q52MB2 194 aa27.53■■■□□ 2
OTUB1-210ENST00000541478 RALBP1Q15311 655 aa27.52■■■□□ 2
OTUB1-210ENST00000541478 VGFO15240 615 aaPredicted RBP27.51■■□□□ 1.99
OTUB1-210ENST00000541478 IDI1Q13907 227 aa27.51■■□□□ 1.99
OTUB1-210ENST00000541478 NEXMIFQ5QGS0 1516 aa27.51■■□□□ 1.99
OTUB1-210ENST00000541478 ERVK-7P63135 1459 aa27.51■■□□□ 1.99
OTUB1-210ENST00000541478 HNRNPUQ00839 825 aaKnown RBP eCLIP27.5■■□□□ 1.99
OTUB1-210ENST00000541478 C14orf93Q9H972 538 aaKnown RBP27.5■■□□□ 1.99
OTUB1-210ENST00000541478 MYO3AQ8NEV4 1616 aa27.48■■□□□ 1.99
OTUB1-210ENST00000541478 CLTCQ00610 1675 aaKnown RBP27.47■■□□□ 1.99
OTUB1-210ENST00000541478 ZFYVE9O95405 1425 aa27.47■■□□□ 1.99
OTUB1-210ENST00000541478 MYBBP1AQ9BQG0 1328 aaKnown RBP27.46■■□□□ 1.99
OTUB1-210ENST00000541478 SBNO2Q9Y2G9 1366 aa27.45■■□□□ 1.99
OTUB1-210ENST00000541478 TMEM131LA2VDJ0 1609 aa27.45■■□□□ 1.99
OTUB1-210ENST00000541478 FAM9BQ8IZU0 186 aa27.45■■□□□ 1.98
OTUB1-210ENST00000541478 PER1O15534 1290 aaPredicted RBP27.44■■□□□ 1.98
OTUB1-210ENST00000541478 CNGB1Q14028 1251 aaPredicted RBP27.44■■□□□ 1.98
OTUB1-210ENST00000541478 ADGRB1O14514 1584 aa27.44■■□□□ 1.98
OTUB1-210ENST00000541478 PANK3Q9H999 370 aa27.43■■□□□ 1.98
OTUB1-210ENST00000541478 KDM5AP29375 1690 aaKnown RBP27.42■■□□□ 1.98
OTUB1-210ENST00000541478 PARD3Q8TEW0 1356 aa27.42■■□□□ 1.98
OTUB1-210ENST00000541478 SPATA31D1Q6ZQQ2 1576 aa27.41■■□□□ 1.98
OTUB1-210ENST00000541478 BRD4O60885 1362 aaPredicted RBP27.41■■□□□ 1.98
OTUB1-210ENST00000541478 FBXO31Q5XUX0 539 aaPredicted RBP27.39■■□□□ 1.98
OTUB1-210ENST00000541478 TMC1Q8TDI8 760 aa27.39■■□□□ 1.97
OTUB1-210ENST00000541478 ESF1Q9H501 851 aaKnown RBP27.39■■□□□ 1.97
OTUB1-210ENST00000541478 CENPJQ9HC77 1338 aaPredicted RBP27.38■■□□□ 1.97
OTUB1-210ENST00000541478 MLECQ14165 292 aa27.37■■□□□ 1.97
OTUB1-210ENST00000541478 MYO5BQ9ULV0 1848 aa27.37■■□□□ 1.97
OTUB1-210ENST00000541478 NLRP13Q86W25 1043 aa27.34■■□□□ 1.97
OTUB1-210ENST00000541478 STAG3Q9UJ98 1225 aa27.34■■□□□ 1.97
OTUB1-210ENST00000541478 MYOM1P52179 1685 aa27.33■■□□□ 1.97
OTUB1-210ENST00000541478 TRAK1Q9UPV9 953 aa27.33■■□□□ 1.97
OTUB1-210ENST00000541478 NUTM2DQ5VT03 806 aaPredicted RBP27.32■■□□□ 1.96
OTUB1-210ENST00000541478 KNSTRNQ9Y448 316 aa27.32■■□□□ 1.96
OTUB1-210ENST00000541478 ZBED9Q6R2W3 1325 aa27.31■■□□□ 1.96
OTUB1-210ENST00000541478 QRICH2Q9H0J4 1663 aa27.31■■□□□ 1.96
OTUB1-210ENST00000541478 TMEM132EQ6IEE7 984 aa27.3■■□□□ 1.96
OTUB1-210ENST00000541478 PNISRQ8TF01 805 aaKnown RBP27.29■■□□□ 1.96
OTUB1-210ENST00000541478 ZMYM3Q14202 1370 aa27.28■■□□□ 1.96
OTUB1-210ENST00000541478 CC2D1BQ5T0F9 858 aaKnown RBP27.27■■□□□ 1.96
OTUB1-210ENST00000541478 ARHGEF28Q8N1W1 1705 aaKnown RBP27.25■■□□□ 1.95
OTUB1-210ENST00000541478 A2ML1A8K2U0 1454 aa27.25■■□□□ 1.95
OTUB1-210ENST00000541478 ASXL1Q8IXJ9 1541 aa27.25■■□□□ 1.95
OTUB1-210ENST00000541478 NPC1L1Q9UHC9 1359 aa27.25■■□□□ 1.95
OTUB1-210ENST00000541478 LRPPRCP42704 1394 aaKnown RBP27.23■■□□□ 1.95
OTUB1-210ENST00000541478 SUPT16HQ9Y5B9 1047 aaKnown RBP27.2■■□□□ 1.95
OTUB1-210ENST00000541478 AMER1Q5JTC6 1135 aaPredicted RBP27.2■■□□□ 1.94
OTUB1-210ENST00000541478 NEFLP07196 543 aa27.19■■□□□ 1.94
OTUB1-210ENST00000541478 PUS7Q96PZ0 661 aaKnown RBP27.19■■□□□ 1.94
OTUB1-210ENST00000541478 RIMS2Q9UQ26 1411 aa27.19■■□□□ 1.94
OTUB1-210ENST00000541478 ALKQ9UM73 1620 aa27.18■■□□□ 1.94
OTUB1-210ENST00000541478 EVC2Q86UK5 1308 aa27.17■■□□□ 1.94
OTUB1-210ENST00000541478 TNRQ92752 1358 aa27.16■■□□□ 1.94
OTUB1-210ENST00000541478 YTHDC2Q9H6S0 1430 aaKnown RBP27.15■■□□□ 1.94
OTUB1-210ENST00000541478 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.14■■□□□ 1.94
OTUB1-210ENST00000541478 INSRP06213 1382 aa27.12■■□□□ 1.93
OTUB1-210ENST00000541478 TULP4Q9NRJ4 1543 aa27.11■■□□□ 1.93
OTUB1-210ENST00000541478 HDGFP51858 240 aaKnown RBP27.11■■□□□ 1.93
OTUB1-210ENST00000541478 PTPRMP28827 1452 aa27.1■■□□□ 1.93
OTUB1-210ENST00000541478 STK26Q9P289 416 aa27.09■■□□□ 1.93
OTUB1-210ENST00000541478 PPP2R1AP30153 589 aa27.07■■□□□ 1.92
OTUB1-210ENST00000541478 FKBP8Q14318 412 aa27.06■■□□□ 1.92
OTUB1-210ENST00000541478 NINLQ9Y2I6 1382 aa27.06■■□□□ 1.92
OTUB1-210ENST00000541478 CARD14Q9BXL6 1004 aa27.04■■□□□ 1.92
OTUB1-210ENST00000541478 POGKQ9P215 609 aa27.04■■□□□ 1.92
OTUB1-210ENST00000541478 DLC1Q96QB1 1528 aa27.04■■□□□ 1.92
OTUB1-210ENST00000541478 NLRP1Q9C000 1473 aa27.04■■□□□ 1.92
OTUB1-210ENST00000541478 SETD1AO15047 1707 aaKnown RBP27.03■■□□□ 1.92
OTUB1-210ENST00000541478 PRAM1Q96QH2 718 aa27.03■■□□□ 1.92
OTUB1-210ENST00000541478 SENP3Q9H4L4 574 aaPredicted RBP27.03■■□□□ 1.92
OTUB1-210ENST00000541478 NSD3Q9BZ95 1437 aa27.02■■□□□ 1.92
OTUB1-210ENST00000541478 UBR1Q8IWV7 1749 aa27.02■■□□□ 1.92
OTUB1-210ENST00000541478 USP32Q8NFA0 1604 aa27.02■■□□□ 1.92
OTUB1-210ENST00000541478 SLC12A5Q9H2X9 1139 aa27.02■■□□□ 1.92
OTUB1-210ENST00000541478 SMG6Q86US8 1419 aaKnown RBP27.01■■□□□ 1.91
OTUB1-210ENST00000541478 SAFB2Q14151 953 aaKnown RBP eCLIP27.01■■□□□ 1.91
OTUB1-210ENST00000541478 ATAD2Q6PL18 1390 aa27■■□□□ 1.91
OTUB1-210ENST00000541478 ANKRD36BQ8N2N9 1353 aa27■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms