RNA–Protein interactions for RNA: ENST00000541466.1

KNTC1-212, Transcript of kinetochore associated 1, humanhuman

TSL 2

Gene KNTC1, Length 616 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-212ENST00000541466 SLF2Q8IX21 1173 aa6.92□□□□□ -1.3
KNTC1-212ENST00000541466 NPDC1Q9NQX5 325 aaPredicted RBP6.92□□□□□ -1.3
KNTC1-212ENST00000541466 SMYD5Q6GMV2 418 aa6.91□□□□□ -1.3
KNTC1-212ENST00000541466 MLLT3P42568 568 aaPredicted RBP6.9□□□□□ -1.3
KNTC1-212ENST00000541466 APLP1P51693 650 aa6.9□□□□□ -1.3
KNTC1-212ENST00000541466 PPP1R18Q6NYC8 613 aa6.9□□□□□ -1.3
KNTC1-212ENST00000541466 ZNF516Q92618 1163 aa6.9□□□□□ -1.3
KNTC1-212ENST00000541466 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.9□□□□□ -1.3
KNTC1-212ENST00000541466 COPS2P61201 443 aa6.89□□□□□ -1.31
KNTC1-212ENST00000541466 TTC13Q8NBP0 860 aa6.89□□□□□ -1.31
KNTC1-212ENST00000541466 GGCXP38435 758 aa6.88□□□□□ -1.31
KNTC1-212ENST00000541466 LMOD2Q6P5Q4 547 aa6.88□□□□□ -1.31
KNTC1-212ENST00000541466 STK17AQ9UEE5 414 aa6.88□□□□□ -1.31
KNTC1-212ENST00000541466 NUTM2FA1L443 756 aa6.87□□□□□ -1.31
KNTC1-212ENST00000541466 MYT1Q01538 1121 aa6.87□□□□□ -1.31
KNTC1-212ENST00000541466 NKX2-3Q8TAU0 364 aa6.86□□□□□ -1.31
KNTC1-212ENST00000541466 RBM46Q8TBY0 533 aaKnown RBP6.86□□□□□ -1.31
KNTC1-212ENST00000541466 EYA1Q99502 592 aa6.86□□□□□ -1.31
KNTC1-212ENST00000541466 PRR14Q9BWN1 585 aa6.86□□□□□ -1.31
KNTC1-212ENST00000541466 DHX30Q7L2E3 1194 aaKnown RBP eCLIP6.85□□□□□ -1.31
KNTC1-212ENST00000541466 DNAJB2P25686 324 aa6.84□□□□□ -1.31
KNTC1-212ENST00000541466 TPRNQ4KMQ1 711 aa6.84□□□□□ -1.31
KNTC1-212ENST00000541466 PCDHB3Q9Y5E6 796 aa6.84□□□□□ -1.31
KNTC1-212ENST00000541466 ZPR1O75312 459 aa6.83□□□□□ -1.32
KNTC1-212ENST00000541466 PTGDRQ13258 359 aa6.83□□□□□ -1.32
KNTC1-212ENST00000541466 RBM26Q5T8P6 1007 aaKnown RBP6.83□□□□□ -1.32
KNTC1-212ENST00000541466 TRIM67Q6ZTA4 783 aa6.83□□□□□ -1.32
KNTC1-212ENST00000541466 KMT5BQ4FZB7 885 aa6.82□□□□□ -1.32
KNTC1-212ENST00000541466 GPIHBP1Q8IV16 184 aa6.82□□□□□ -1.32
KNTC1-212ENST00000541466 TMUB1Q9BVT8 246 aa6.82□□□□□ -1.32
KNTC1-212ENST00000541466 DGAT1O75907 488 aa6.81□□□□□ -1.32
KNTC1-212ENST00000541466 FAM161AQ3B820 660 aa6.81□□□□□ -1.32
KNTC1-212ENST00000541466 RCCD1A6NED2 376 aa6.8□□□□□ -1.32
KNTC1-212ENST00000541466 FCHSD2O94868 740 aa6.8□□□□□ -1.32
KNTC1-212ENST00000541466 ADGRG1Q9Y653 693 aa6.8□□□□□ -1.32
KNTC1-212ENST00000541466 PKDCCQ504Y2 493 aa6.79□□□□□ -1.32
KNTC1-212ENST00000541466 BLOC1S3Q6QNY0 202 aa6.79□□□□□ -1.32
KNTC1-212ENST00000541466 TMEM134Q9H6X4 195 aa6.79□□□□□ -1.32
KNTC1-212ENST00000541466 PRKCSHP14314 528 aaPredicted RBP6.78□□□□□ -1.32
KNTC1-212ENST00000541466 RSPH4AQ5TD94 716 aa6.78□□□□□ -1.32
KNTC1-212ENST00000541466 WIPF1O43516 503 aa6.77□□□□□ -1.33
KNTC1-212ENST00000541466 WFS1O76024 890 aa6.77□□□□□ -1.33
KNTC1-212ENST00000541466 OATP04181 439 aa6.77□□□□□ -1.33
KNTC1-212ENST00000541466 SLC19A1P41440 591 aa6.77□□□□□ -1.33
KNTC1-212ENST00000541466 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP6.76□□□□□ -1.33
KNTC1-212ENST00000541466 ACTN4O43707 911 aaKnown RBP6.76□□□□□ -1.33
KNTC1-212ENST00000541466 CFHP08603 1231 aa6.76□□□□□ -1.33
KNTC1-212ENST00000541466 ZC3H15Q8WU90 426 aaKnown RBP6.76□□□□□ -1.33
KNTC1-212ENST00000541466 RNF223E7ERA6 249 aa6.75□□□□□ -1.33
KNTC1-212ENST00000541466 INSM1Q01101 510 aaPredicted RBP6.75□□□□□ -1.33
KNTC1-212ENST00000541466 PPEF1O14829 653 aaPredicted RBP6.74□□□□□ -1.33
KNTC1-212ENST00000541466 TLL1O43897 1013 aa6.74□□□□□ -1.33
KNTC1-212ENST00000541466 NR1I2O75469 434 aa6.74□□□□□ -1.33
KNTC1-212ENST00000541466 SLC10A3P09131 477 aa6.73□□□□□ -1.33
KNTC1-212ENST00000541466 HIC1Q14526 733 aa6.73□□□□□ -1.33
KNTC1-212ENST00000541466 S1PR4O95977 384 aa6.72□□□□□ -1.33
KNTC1-212ENST00000541466 NFX1Q12986 1120 aaKnown RBP6.72□□□□□ -1.33
KNTC1-212ENST00000541466 ANKLE1Q8NAG6 615 aa6.72□□□□□ -1.33
KNTC1-212ENST00000541466 PXYLP1Q8TE99 480 aa6.72□□□□□ -1.33
KNTC1-212ENST00000541466 GPR37O15354 613 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 ADH1BP00325 375 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 PRR20EP86478 221 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 PRR20CP86479 221 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 PRR20DP86480 221 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 PRR20BP86481 221 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 PRR20AP86496 221 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 SUZ12Q15022 739 aaKnown RBP6.71□□□□□ -1.34
KNTC1-212ENST00000541466 SPRYD7Q5W111 196 aa6.71□□□□□ -1.34
KNTC1-212ENST00000541466 EMID1Q96A84 441 aaPredicted RBP6.71□□□□□ -1.34
KNTC1-212ENST00000541466 ST8SIA5O15466 376 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 ZMYND10O75800 440 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 PUS10Q3MIT2 529 aaKnown RBP6.7□□□□□ -1.34
KNTC1-212ENST00000541466 ZNF598Q86UK7 904 aaKnown RBP6.7□□□□□ -1.34
KNTC1-212ENST00000541466 SCUBE3Q8IX30 993 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 KRI1Q8N9T8 703 aaKnown RBP6.7□□□□□ -1.34
KNTC1-212ENST00000541466 RDH13Q8NBN7 331 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 SLC6A16Q9GZN6 736 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 AAASQ9NRG9 546 aa6.7□□□□□ -1.34
KNTC1-212ENST00000541466 GNPATO15228 680 aa6.69□□□□□ -1.34
KNTC1-212ENST00000541466 METTL3Q86U44 580 aaKnown RBP6.69□□□□□ -1.34
KNTC1-212ENST00000541466 FAM187AA6NFU0 413 aa6.68□□□□□ -1.34
KNTC1-212ENST00000541466 ZNF697Q5TEC3 545 aa6.68□□□□□ -1.34
KNTC1-212ENST00000541466 LIAT1Q6ZQX7 453 aa6.68□□□□□ -1.34
KNTC1-212ENST00000541466 BARGINQ6ZT62 677 aa6.68□□□□□ -1.34
KNTC1-212ENST00000541466 DAXXQ9UER7 740 aaPredicted RBP6.68□□□□□ -1.34
KNTC1-212ENST00000541466 DDX11L8A8MPP1 907 aa6.67□□□□□ -1.34
KNTC1-212ENST00000541466 SPSB2Q99619 263 aa6.67□□□□□ -1.34
KNTC1-212ENST00000541466 SLC24A3Q9HC58 644 aa6.67□□□□□ -1.34
KNTC1-212ENST00000541466 FECHP22830 423 aa6.66□□□□□ -1.34
KNTC1-212ENST00000541466 MAP2K5Q13163 448 aa6.66□□□□□ -1.34
KNTC1-212ENST00000541466 LCE2CQ5TA81 110 aa6.66□□□□□ -1.34
KNTC1-212ENST00000541466 TNFRSF10AO00220 468 aa6.65□□□□□ -1.34
KNTC1-212ENST00000541466 ATP6V1AP38606 617 aa6.64□□□□□ -1.35
KNTC1-212ENST00000541466 NLRP7Q8WX94 980 aa6.64□□□□□ -1.35
KNTC1-212ENST00000541466 CCDC102AQ96A19 550 aa6.64□□□□□ -1.35
KNTC1-212ENST00000541466 MINK1Q8N4C8 1332 aaPredicted RBP6.64□□□□□ -1.35
KNTC1-212ENST00000541466 GDF9O60383 454 aa6.63□□□□□ -1.35
KNTC1-212ENST00000541466 FUT2Q10981 343 aa6.63□□□□□ -1.35
KNTC1-212ENST00000541466 FOXC1Q12948 553 aa6.63□□□□□ -1.35
KNTC1-212ENST00000541466 SULF1Q8IWU6 871 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms