RNA–Protein interactions for RNA: ENST00000541335.1

KDM5A-208, Transcript of lysine demethylase 5A, humanhuman

TSL 2

Gene KDM5A, Length 378 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5A-208ENST00000541335 PPP1R18Q6NYC8 613 aa8.41□□□□□ -1.06
KDM5A-208ENST00000541335 NKX2-3Q8TAU0 364 aa8.41□□□□□ -1.06
KDM5A-208ENST00000541335 PRR14Q9BWN1 585 aa8.41□□□□□ -1.06
KDM5A-208ENST00000541335 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.4□□□□□ -1.06
KDM5A-208ENST00000541335 GPR37O15354 613 aa8.4□□□□□ -1.06
KDM5A-208ENST00000541335 PXYLP1Q8TE99 480 aa8.4□□□□□ -1.06
KDM5A-208ENST00000541335 OATP04181 439 aa8.39□□□□□ -1.07
KDM5A-208ENST00000541335 PCDHB3Q9Y5E6 796 aa8.39□□□□□ -1.07
KDM5A-208ENST00000541335 ZPR1O75312 459 aa8.38□□□□□ -1.07
KDM5A-208ENST00000541335 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.38□□□□□ -1.07
KDM5A-208ENST00000541335 GNPATO15228 680 aa8.37□□□□□ -1.07
KDM5A-208ENST00000541335 SLC10A3P09131 477 aa8.37□□□□□ -1.07
KDM5A-208ENST00000541335 FECHP22830 423 aa8.37□□□□□ -1.07
KDM5A-208ENST00000541335 BLOC1S3Q6QNY0 202 aa8.37□□□□□ -1.07
KDM5A-208ENST00000541335 METTL3Q86U44 580 aaKnown RBP8.37□□□□□ -1.07
KDM5A-208ENST00000541335 ACTN4O43707 911 aaKnown RBP8.36□□□□□ -1.07
KDM5A-208ENST00000541335 CFHP08603 1231 aa8.36□□□□□ -1.07
KDM5A-208ENST00000541335 KMT5BQ4FZB7 885 aa8.36□□□□□ -1.07
KDM5A-208ENST00000541335 PRKD2Q9BZL6 878 aa8.36□□□□□ -1.07
KDM5A-208ENST00000541335 GGCXP38435 758 aa8.33□□□□□ -1.08
KDM5A-208ENST00000541335 V9GY48 417 aaPredicted RBP8.33□□□□□ -1.08
KDM5A-208ENST00000541335 TLL1O43897 1013 aa8.32□□□□□ -1.08
KDM5A-208ENST00000541335 TMUB1Q9BVT8 246 aa8.32□□□□□ -1.08
KDM5A-208ENST00000541335 GPIHBP1Q8IV16 184 aa8.31□□□□□ -1.08
KDM5A-208ENST00000541335 VSIG10Q8N0Z9 540 aa8.31□□□□□ -1.08
KDM5A-208ENST00000541335 Q6ZNB5 142 aa8.3□□□□□ -1.08
KDM5A-208ENST00000541335 GFRA3O60609 400 aa8.29□□□□□ -1.08
KDM5A-208ENST00000541335 LAPTM4AQ15012 233 aa8.29□□□□□ -1.08
KDM5A-208ENST00000541335 NLRP7Q8WX94 980 aa8.29□□□□□ -1.08
KDM5A-208ENST00000541335 DAXXQ9UER7 740 aaPredicted RBP8.29□□□□□ -1.08
KDM5A-208ENST00000541335 RNF223E7ERA6 249 aa8.28□□□□□ -1.08
KDM5A-208ENST00000541335 NR1I2O75469 434 aa8.28□□□□□ -1.08
KDM5A-208ENST00000541335 RSPH4AQ5TD94 716 aa8.28□□□□□ -1.08
KDM5A-208ENST00000541335 PHOX2BQ99453 314 aa8.28□□□□□ -1.08
KDM5A-208ENST00000541335 ADH1BP00325 375 aa8.26□□□□□ -1.09
KDM5A-208ENST00000541335 RDH13Q8NBN7 331 aa8.26□□□□□ -1.09
KDM5A-208ENST00000541335 DDX11L8A8MPP1 907 aa8.25□□□□□ -1.09
KDM5A-208ENST00000541335 S1PR4O95977 384 aa8.25□□□□□ -1.09
KDM5A-208ENST00000541335 PUS10Q3MIT2 529 aaKnown RBP8.25□□□□□ -1.09
KDM5A-208ENST00000541335 SCUBE3Q8IX30 993 aa8.25□□□□□ -1.09
KDM5A-208ENST00000541335 EMID1Q96A84 441 aaPredicted RBP8.25□□□□□ -1.09
KDM5A-208ENST00000541335 NRG2O14511 850 aaPredicted RBP8.24□□□□□ -1.09
KDM5A-208ENST00000541335 LCE2BO14633 110 aa8.23□□□□□ -1.09
KDM5A-208ENST00000541335 PPEF1O14829 653 aaPredicted RBP8.23□□□□□ -1.09
KDM5A-208ENST00000541335 ANKLE1Q8NAG6 615 aa8.23□□□□□ -1.09
KDM5A-208ENST00000541335 SLC19A1P41440 591 aa8.22□□□□□ -1.09
KDM5A-208ENST00000541335 MORN1Q5T089 497 aa8.22□□□□□ -1.09
KDM5A-208ENST00000541335 SULF1Q8IWU6 871 aa8.22□□□□□ -1.09
KDM5A-208ENST00000541335 SLC6A16Q9GZN6 736 aa8.22□□□□□ -1.09
KDM5A-208ENST00000541335 TULP1O00294 542 aaPredicted RBP8.21□□□□□ -1.1
KDM5A-208ENST00000541335 GCGRP47871 477 aa8.21□□□□□ -1.1
KDM5A-208ENST00000541335 FUT2Q10981 343 aa8.21□□□□□ -1.1
KDM5A-208ENST00000541335 MAP2K5Q13163 448 aa8.21□□□□□ -1.1
KDM5A-208ENST00000541335 PDZRN3Q9UPQ7 1066 aa8.21□□□□□ -1.1
KDM5A-208ENST00000541335 SPSB2Q99619 263 aa8.2□□□□□ -1.1
KDM5A-208ENST00000541335 ATP6V1AP38606 617 aa8.19□□□□□ -1.1
KDM5A-208ENST00000541335 TRAF7Q6Q0C0 670 aa8.19□□□□□ -1.1
KDM5A-208ENST00000541335 LIAT1Q6ZQX7 453 aa8.19□□□□□ -1.1
KDM5A-208ENST00000541335 IRF6O14896 467 aa8.18□□□□□ -1.1
KDM5A-208ENST00000541335 SPRYD7Q5W111 196 aa8.18□□□□□ -1.1
KDM5A-208ENST00000541335 TRIM67Q6ZTA4 783 aa8.18□□□□□ -1.1
KDM5A-208ENST00000541335 THAP11Q96EK4 314 aa8.18□□□□□ -1.1
KDM5A-208ENST00000541335 PLA2G2CQ5R387 149 aa8.17□□□□□ -1.1
KDM5A-208ENST00000541335 SLC27A5Q9Y2P5 690 aa8.17□□□□□ -1.1
KDM5A-208ENST00000541335 ZNF598Q86UK7 904 aaKnown RBP8.16□□□□□ -1.1
KDM5A-208ENST00000541335 MINK1Q8N4C8 1332 aaPredicted RBP8.16□□□□□ -1.1
KDM5A-208ENST00000541335 CD46P15529 392 aa8.15□□□□□ -1.1
KDM5A-208ENST00000541335 FMNL1O95466 1100 aaPredicted RBP8.14□□□□□ -1.11
KDM5A-208ENST00000541335 MDM2Q00987 491 aaPredicted RBP8.14□□□□□ -1.11
KDM5A-208ENST00000541335 ZNF697Q5TEC3 545 aa8.14□□□□□ -1.11
KDM5A-208ENST00000541335 FAM160A2Q8N612 972 aaPredicted RBP8.14□□□□□ -1.11
KDM5A-208ENST00000541335 CCDC102AQ96A19 550 aa8.14□□□□□ -1.11
KDM5A-208ENST00000541335 BRICD5Q6PL45 260 aa8.13□□□□□ -1.11
KDM5A-208ENST00000541335 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.13□□□□□ -1.11
KDM5A-208ENST00000541335 SALL2Q9Y467 1007 aaPredicted RBP8.13□□□□□ -1.11
KDM5A-208ENST00000541335 PRR20EP86478 221 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 PRR20CP86479 221 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 PRR20DP86480 221 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 PRR20BP86481 221 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 PRR20AP86496 221 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 GRIPAP1Q4V328 841 aa8.12□□□□□ -1.11
KDM5A-208ENST00000541335 GDF9O60383 454 aa8.11□□□□□ -1.11
KDM5A-208ENST00000541335 RNF19BQ6ZMZ0 732 aa8.11□□□□□ -1.11
KDM5A-208ENST00000541335 PRDM9Q9NQV7 894 aa8.11□□□□□ -1.11
KDM5A-208ENST00000541335 FCF1Q9Y324 198 aaKnown RBP8.11□□□□□ -1.11
KDM5A-208ENST00000541335 KDM4AO75164 1064 aa8.09□□□□□ -1.11
KDM5A-208ENST00000541335 MSS51Q4VC12 460 aa8.09□□□□□ -1.11
KDM5A-208ENST00000541335 TNFRSF10AO00220 468 aa8.08□□□□□ -1.12
KDM5A-208ENST00000541335 RPIAP49247 311 aa8.08□□□□□ -1.12
KDM5A-208ENST00000541335 Q3C1V9 767 aa8.08□□□□□ -1.12
KDM5A-208ENST00000541335 LMOD2Q6P5Q4 547 aa8.08□□□□□ -1.12
KDM5A-208ENST00000541335 GPCPD1Q9NPB8 672 aa8.08□□□□□ -1.12
KDM5A-208ENST00000541335 DGAT1O75907 488 aa8.07□□□□□ -1.12
KDM5A-208ENST00000541335 CLCN1P35523 988 aa8.07□□□□□ -1.12
KDM5A-208ENST00000541335 USP46P62068 366 aa8.07□□□□□ -1.12
KDM5A-208ENST00000541335 PKD2L1Q9P0L9 805 aa8.07□□□□□ -1.12
KDM5A-208ENST00000541335 PKDCCQ504Y2 493 aa8.06□□□□□ -1.12
KDM5A-208ENST00000541335 HLA-CQ95604 372 aa8.06□□□□□ -1.12
KDM5A-208ENST00000541335 FAM217BQ9NTX9 383 aaPredicted RBP8.06□□□□□ -1.12
KDM5A-208ENST00000541335 HOXA2O43364 376 aa8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms