RNA–Protein interactions for RNA: ENST00000541295.5

LMO3-225, Transcript of LIM domain only 3, humanhuman

TSL 2 BASIC

Gene LMO3, Length 3,498 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO3-225ENST00000541295 SIN3AQ96ST3 1273 aa7.92□□□□□ -1.14
LMO3-225ENST00000541295 TMCO4Q5TGY1 634 aa7.92□□□□□ -1.14
LMO3-225ENST00000541295 MAP7D2Q96T17 732 aa7.92□□□□□ -1.14
LMO3-225ENST00000541295 ATP10BO94823 1461 aa7.91□□□□□ -1.14
LMO3-225ENST00000541295 KIF14Q15058 1648 aa7.91□□□□□ -1.14
LMO3-225ENST00000541295 ARHGEF11O15085 1522 aa7.91□□□□□ -1.14
LMO3-225ENST00000541295 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP7.9□□□□□ -1.14
LMO3-225ENST00000541295 ABCA8O94911 1581 aa7.9□□□□□ -1.14
LMO3-225ENST00000541295 LOC102724159A0A0B4J2E5 919 aa7.9□□□□□ -1.14
LMO3-225ENST00000541295 PWP2Q15269 919 aaKnown RBP7.9□□□□□ -1.14
LMO3-225ENST00000541295 C1orf115Q9H7X2 142 aa7.9□□□□□ -1.14
LMO3-225ENST00000541295 SLC52A1Q9NWF4 448 aa7.9□□□□□ -1.14
LMO3-225ENST00000541295 ARID4AP29374 1257 aaPredicted RBP7.9□□□□□ -1.15
LMO3-225ENST00000541295 SPTY2D1Q68D10 685 aaPredicted RBP7.9□□□□□ -1.15
LMO3-225ENST00000541295 EGFL6Q8IUX8 553 aa7.9□□□□□ -1.15
LMO3-225ENST00000541295 SH3BP1Q9Y3L3 701 aa7.9□□□□□ -1.15
LMO3-225ENST00000541295 UACAQ9BZF9 1416 aa7.9□□□□□ -1.15
LMO3-225ENST00000541295 MIA2Q96PC5 1412 aa7.89□□□□□ -1.15
LMO3-225ENST00000541295 PSEN1P49768 467 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 PPP4R3BQ5MIZ7 849 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 CARD10Q9BWT7 1032 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 RINLQ6ZS11 566 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 HFM1A2PYH4 1435 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 NAIPQ13075 1403 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 NRDCO43847 1150 aa7.88□□□□□ -1.15
LMO3-225ENST00000541295 ANP32CO43423 234 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 UTP14CQ5TAP6 766 aaKnown RBP7.87□□□□□ -1.15
LMO3-225ENST00000541295 NBPF9Q3BBW0 867 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 TERF2IPQ9NYB0 399 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 CAMSAP2Q08AD1 1489 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 TCOF1Q13428 1488 aaKnown RBP7.87□□□□□ -1.15
LMO3-225ENST00000541295 MAPKBP1O60336 1514 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 MFAP1P55081 439 aaKnown RBP7.87□□□□□ -1.15
LMO3-225ENST00000541295 ARMCX6Q7L4S7 300 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 ZHX1Q9UKY1 873 aaPredicted RBP7.87□□□□□ -1.15
LMO3-225ENST00000541295 DAPK1P53355 1430 aa7.87□□□□□ -1.15
LMO3-225ENST00000541295 GPATCH8Q9UKJ3 1502 aaKnown RBP7.87□□□□□ -1.15
LMO3-225ENST00000541295 HNRNPMP52272 730 aaKnown RBP eCLIP7.86□□□□□ -1.15
LMO3-225ENST00000541295 MYH16Q9H6N6 1097 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 TPM2P07951 284 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 SEMA3FQ13275 785 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 SHROOM2Q13796 1616 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 OSCARQ8IYS5 282 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 CLASP1Q7Z460 1538 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 WASHC2AQ641Q2 1341 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 APBB1O00213 710 aa7.86□□□□□ -1.15
LMO3-225ENST00000541295 ABCC5O15440 1437 aa7.85□□□□□ -1.15
LMO3-225ENST00000541295 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.85□□□□□ -1.15
LMO3-225ENST00000541295 GOLIM4O00461 696 aa7.85□□□□□ -1.15
LMO3-225ENST00000541295 TSHZ1Q6ZSZ6 1077 aa7.85□□□□□ -1.15
LMO3-225ENST00000541295 RIPOR2Q9Y4F9 1068 aa7.85□□□□□ -1.15
LMO3-225ENST00000541295 KIF20AO95235 890 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 BRPF1P55201 1214 aaPredicted RBP7.84□□□□□ -1.15
LMO3-225ENST00000541295 ZBTB47Q9UFB7 747 aaPredicted RBP7.84□□□□□ -1.15
LMO3-225ENST00000541295 ITSN2Q9NZM3 1697 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 DDRGK1Q96HY6 314 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 ABCC2Q92887 1545 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 TSPY4P0CV99 314 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 TSPY10P0CW01 314 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 MPNDQ8N594 471 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 OTUD6BQ8N6M0 293 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 BANK1Q8NDB2 785 aa7.84□□□□□ -1.15
LMO3-225ENST00000541295 POLD1P28340 1107 aa7.83□□□□□ -1.16
LMO3-225ENST00000541295 TONSLQ96HA7 1378 aa7.83□□□□□ -1.16
LMO3-225ENST00000541295 SGSM3Q96HU1 749 aa7.83□□□□□ -1.16
LMO3-225ENST00000541295 KDM6BO15054 1643 aa7.83□□□□□ -1.16
LMO3-225ENST00000541295 CALRP27797 417 aaKnown RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 GORABQ5T7V8 394 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 DNMT1P26358 1616 aaKnown RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 HDAC1Q13547 482 aaPredicted RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 GSE1Q14687 1217 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 RBM26Q5T8P6 1007 aaKnown RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 YY1AP1Q9H869 796 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 ZBTB12Q9Y330 459 aaPredicted RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 ARHGAP5Q13017 1502 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 ADCY10Q96PN6 1610 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 NBPF6Q5VWK0 638 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 NBPF5PQ86XG9 351 aaPredicted RBP7.82□□□□□ -1.16
LMO3-225ENST00000541295 NBPF4Q96M43 638 aa7.82□□□□□ -1.16
LMO3-225ENST00000541295 ABCC10Q5T3U5 1492 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 CDC42BPAQ5VT25 1732 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 BRD1O95696 1058 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 MAP2K1Q02750 393 aaPredicted RBP7.81□□□□□ -1.16
LMO3-225ENST00000541295 LMOD3Q0VAK6 560 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 MPHOSPH9Q99550 1183 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 HIRIP3Q9BW71 556 aaPredicted RBP7.81□□□□□ -1.16
LMO3-225ENST00000541295 NEUROD2Q15784 382 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 PIAS4Q8N2W9 510 aaPredicted RBP7.81□□□□□ -1.16
LMO3-225ENST00000541295 RBM28Q9NW13 759 aaKnown RBP7.81□□□□□ -1.16
LMO3-225ENST00000541295 GEMIN8Q9NWZ8 242 aaKnown RBP7.81□□□□□ -1.16
LMO3-225ENST00000541295 MRVI1Q9Y6F6 885 aa7.81□□□□□ -1.16
LMO3-225ENST00000541295 ANKRD30AQ9BXX3 1397 aa7.8□□□□□ -1.16
LMO3-225ENST00000541295 GOLGA6L3A6NEY3 463 aa7.8□□□□□ -1.16
LMO3-225ENST00000541295 ZNF500O60304 480 aaPredicted RBP7.8□□□□□ -1.16
LMO3-225ENST00000541295 MTERF4Q7Z6M4 381 aaKnown RBP7.8□□□□□ -1.16
LMO3-225ENST00000541295 CCDC125Q86Z20 511 aa7.8□□□□□ -1.16
LMO3-225ENST00000541295 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.8□□□□□ -1.16
LMO3-225ENST00000541295 AKNAQ7Z591 1439 aa7.8□□□□□ -1.16
LMO3-225ENST00000541295 GCC2Q8IWJ2 1684 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms