RNA–Protein interactions for RNA: ENST00000541124.5

PSME3-203, Transcript of proteasome activator subunit 3, humanhuman

TSL 1 (best) BASIC

Gene PSME3, Length 3,366 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSME3-203ENST00000541124 U2AF1Q01081 240 aaKnown RBP eCLIP17.96■□□□□ 0.47
PSME3-203ENST00000541124 AFAP1Q8N556 730 aa17.95■□□□□ 0.46
PSME3-203ENST00000541124 PANK2Q9BZ23 570 aa17.94■□□□□ 0.46
PSME3-203ENST00000541124 ITPRIPQ8IWB1 547 aa17.94■□□□□ 0.46
PSME3-203ENST00000541124 CGNL1Q0VF96 1302 aa17.94■□□□□ 0.46
PSME3-203ENST00000541124 PLEKHH2Q8IVE3 1493 aa17.94■□□□□ 0.46
PSME3-203ENST00000541124 MAGI1Q96QZ7 1491 aaPredicted RBP17.94■□□□□ 0.46
PSME3-203ENST00000541124 RLBP1P12271 317 aa17.94■□□□□ 0.46
PSME3-203ENST00000541124 TSR2Q969E8 191 aaKnown RBP17.93■□□□□ 0.46
PSME3-203ENST00000541124 PCDHB15Q9Y5E8 787 aa17.93■□□□□ 0.46
PSME3-203ENST00000541124 TCP11L2Q8N4U5 519 aa17.93■□□□□ 0.46
PSME3-203ENST00000541124 KIF3BO15066 747 aa17.93■□□□□ 0.46
PSME3-203ENST00000541124 A2MP01023 1474 aa17.92■□□□□ 0.46
PSME3-203ENST00000541124 POLR1AO95602 1720 aaPredicted RBP17.92■□□□□ 0.46
PSME3-203ENST00000541124 GOLGA6L3A6NEY3 463 aa17.92■□□□□ 0.46
PSME3-203ENST00000541124 WWC1Q8IX03 1113 aa17.92■□□□□ 0.46
PSME3-203ENST00000541124 SLC12A5Q9H2X9 1139 aa17.92■□□□□ 0.46
PSME3-203ENST00000541124 PTPRGP23470 1445 aa17.91■□□□□ 0.46
PSME3-203ENST00000541124 FAM135AQ9P2D6 1515 aa17.91■□□□□ 0.46
PSME3-203ENST00000541124 BLMP54132 1417 aaPredicted RBP17.91■□□□□ 0.46
PSME3-203ENST00000541124 TMEM132EQ6IEE7 984 aa17.91■□□□□ 0.46
PSME3-203ENST00000541124 EIF4G3O43432 1585 aaKnown RBP17.91■□□□□ 0.46
PSME3-203ENST00000541124 TBC1D2Q9BYX2 928 aa17.91■□□□□ 0.46
PSME3-203ENST00000541124 COL17A1Q9UMD9 1497 aaPredicted RBP17.9■□□□□ 0.46
PSME3-203ENST00000541124 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
PSME3-203ENST00000541124 RRAGDQ9NQL2 400 aaPredicted RBP17.9■□□□□ 0.46
PSME3-203ENST00000541124 SMC4Q9NTJ3 1288 aa17.9■□□□□ 0.46
PSME3-203ENST00000541124 ADGRL2O95490 1459 aa17.9■□□□□ 0.46
PSME3-203ENST00000541124 ATP10BO94823 1461 aa17.89■□□□□ 0.45
PSME3-203ENST00000541124 MAGI2Q86UL8 1455 aa17.89■□□□□ 0.45
PSME3-203ENST00000541124 CEP170Q5SW79 1584 aa17.88■□□□□ 0.45
PSME3-203ENST00000541124 PNNQ9H307 717 aaKnown RBP17.88■□□□□ 0.45
PSME3-203ENST00000541124 L1TD1Q5T7N2 865 aaKnown RBP17.88■□□□□ 0.45
PSME3-203ENST00000541124 ZMYM4Q5VZL5 1548 aa17.88■□□□□ 0.45
PSME3-203ENST00000541124 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
PSME3-203ENST00000541124 ARHGEF12Q9NZN5 1544 aa17.87■□□□□ 0.45
PSME3-203ENST00000541124 PMFBP1Q8TBY8 1022 aa17.87■□□□□ 0.45
PSME3-203ENST00000541124 ITSN2Q9NZM3 1697 aa17.87■□□□□ 0.45
PSME3-203ENST00000541124 MTHFSP49914 203 aa17.87■□□□□ 0.45
PSME3-203ENST00000541124 ARHGAP5Q13017 1502 aa17.87■□□□□ 0.45
PSME3-203ENST00000541124 NKTRP30414 1462 aaKnown RBP17.87■□□□□ 0.45
PSME3-203ENST00000541124 FAM43AQ8N2R8 423 aa17.86■□□□□ 0.45
PSME3-203ENST00000541124 ZBTB7CA1YPR0 619 aa17.86■□□□□ 0.45
PSME3-203ENST00000541124 CARD14Q9BXL6 1004 aa17.86■□□□□ 0.45
PSME3-203ENST00000541124 STK26Q9P289 416 aa17.86■□□□□ 0.45
PSME3-203ENST00000541124 HSCBQ8IWL3 235 aa17.85■□□□□ 0.45
PSME3-203ENST00000541124 RSPH6AQ9H0K4 717 aa17.85■□□□□ 0.45
PSME3-203ENST00000541124 SYNJ2O15056 1496 aa17.85■□□□□ 0.45
PSME3-203ENST00000541124 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
PSME3-203ENST00000541124 ELL2O00472 640 aaPredicted RBP17.85■□□□□ 0.45
PSME3-203ENST00000541124 NCLP19338 710 aaKnown RBP17.85■□□□□ 0.45
PSME3-203ENST00000541124 CCDC141Q6ZP82 1450 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 RARSP54136 660 aaKnown RBP17.84■□□□□ 0.45
PSME3-203ENST00000541124 ARID3AQ99856 593 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 C22orf23Q9BZE7 217 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 LNPKQ9C0E8 428 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 USP19O94966 1318 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 HSP90AB1P08238 724 aaKnown RBP17.84■□□□□ 0.45
PSME3-203ENST00000541124 TPRNQ4KMQ1 711 aa17.84■□□□□ 0.45
PSME3-203ENST00000541124 TRIM44Q96DX7 344 aaPredicted RBP17.84■□□□□ 0.45
PSME3-203ENST00000541124 SPAG9O60271 1321 aaKnown RBP17.84■□□□□ 0.45
PSME3-203ENST00000541124 PDE3AQ14432 1141 aa17.83■□□□□ 0.45
PSME3-203ENST00000541124 CFAP53Q96M91 514 aa17.83■□□□□ 0.45
PSME3-203ENST00000541124 RSPH4AQ5TD94 716 aa17.82■□□□□ 0.44
PSME3-203ENST00000541124 ZNF521Q96K83 1311 aa17.82■□□□□ 0.44
PSME3-203ENST00000541124 PLA2R1Q13018 1463 aa17.82■□□□□ 0.44
PSME3-203ENST00000541124 APBB1O00213 710 aa17.81■□□□□ 0.44
PSME3-203ENST00000541124 TRAK2O60296 914 aa17.81■□□□□ 0.44
PSME3-203ENST00000541124 GGT6Q6P531 493 aa17.81■□□□□ 0.44
PSME3-203ENST00000541124 XRCC6P12956 609 aaKnown RBP eCLIP17.81■□□□□ 0.44
PSME3-203ENST00000541124 EFCAB2Q5VUJ9 269 aa17.81■□□□□ 0.44
PSME3-203ENST00000541124 ADGRF5Q8IZF2 1346 aa17.81■□□□□ 0.44
PSME3-203ENST00000541124 KDM5DQ9BY66 1539 aa17.8■□□□□ 0.44
PSME3-203ENST00000541124 MCM4P33991 863 aa17.8■□□□□ 0.44
PSME3-203ENST00000541124 SYCP2Q9BX26 1530 aa17.79■□□□□ 0.44
PSME3-203ENST00000541124 RUNDC1Q96C34 613 aa17.79■□□□□ 0.44
PSME3-203ENST00000541124 ABCC10Q5T3U5 1492 aa17.79■□□□□ 0.44
PSME3-203ENST00000541124 DZIP1LQ8IYY4 767 aaKnown RBP17.79■□□□□ 0.44
PSME3-203ENST00000541124 C1orf115Q9H7X2 142 aa17.79■□□□□ 0.44
PSME3-203ENST00000541124 EXOSC9Q06265 439 aaKnown RBP17.79■□□□□ 0.44
PSME3-203ENST00000541124 ZKSCAN2Q63HK3 967 aa17.78■□□□□ 0.44
PSME3-203ENST00000541124 EIF3AQ14152 1382 aaKnown RBP17.78■□□□□ 0.44
PSME3-203ENST00000541124 VSIG10Q8N0Z9 540 aa17.78■□□□□ 0.44
PSME3-203ENST00000541124 MYH16Q9H6N6 1097 aa17.78■□□□□ 0.44
PSME3-203ENST00000541124 CDC42BPAQ5VT25 1732 aa17.78■□□□□ 0.44
PSME3-203ENST00000541124 TBC1D32Q96NH3 1257 aa17.77■□□□□ 0.44
PSME3-203ENST00000541124 GGNBP2Q9H3C7 697 aa17.77■□□□□ 0.43
PSME3-203ENST00000541124 CROCC2H7BZ55 1655 aa17.76■□□□□ 0.43
PSME3-203ENST00000541124 SRPK2P78362 688 aaKnown RBP17.76■□□□□ 0.43
PSME3-203ENST00000541124 CABP2Q9NPB3 220 aa17.75■□□□□ 0.43
PSME3-203ENST00000541124 CHMP5Q9NZZ3 219 aa17.74■□□□□ 0.43
PSME3-203ENST00000541124 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
PSME3-203ENST00000541124 WDR7Q9Y4E6 1490 aa17.74■□□□□ 0.43
PSME3-203ENST00000541124 FOXD4L5Q5VV16 416 aaPredicted RBP17.73■□□□□ 0.43
PSME3-203ENST00000541124 FOXD4L4Q8WXT5 416 aaPredicted RBP17.73■□□□□ 0.43
PSME3-203ENST00000541124 ANKRD45Q5TZF3 282 aa17.73■□□□□ 0.43
PSME3-203ENST00000541124 NSD3Q9BZ95 1437 aa17.73■□□□□ 0.43
PSME3-203ENST00000541124 SHANK2Q9UPX8 1470 aa17.73■□□□□ 0.43
PSME3-203ENST00000541124 NUP160Q12769 1436 aa17.72■□□□□ 0.43
PSME3-203ENST00000541124 MVPQ14764 893 aaKnown RBP17.72■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms