RNA–Protein interactions for RNA: ENST00000540659.1

PAAF1-209, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 3

Gene PAAF1, Length 349 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-209ENST00000540659 HSPA2P54652 639 aa13.37□□□□□ -0.27
PAAF1-209ENST00000540659 LAMC1P11047 1609 aa13.37□□□□□ -0.27
PAAF1-209ENST00000540659 WASHC2AQ641Q2 1341 aa13.37□□□□□ -0.27
PAAF1-209ENST00000540659 NEURL4Q96JN8 1562 aa13.37□□□□□ -0.27
PAAF1-209ENST00000540659 TNRQ92752 1358 aa13.36□□□□□ -0.27
PAAF1-209ENST00000540659 ADGRB3O60242 1522 aa13.36□□□□□ -0.27
PAAF1-209ENST00000540659 PIK3C2BO00750 1634 aa13.35□□□□□ -0.27
PAAF1-209ENST00000540659 PPLO60437 1756 aa13.35□□□□□ -0.27
PAAF1-209ENST00000540659 C11orf95C9JLR9 678 aaPredicted RBP13.35□□□□□ -0.27
PAAF1-209ENST00000540659 NBPF1Q3BBV0 1214 aa13.35□□□□□ -0.27
PAAF1-209ENST00000540659 FBXO31Q5XUX0 539 aaPredicted RBP13.35□□□□□ -0.27
PAAF1-209ENST00000540659 ARHGAP31Q2M1Z3 1444 aa13.35□□□□□ -0.27
PAAF1-209ENST00000540659 STRCQ7RTU9 1775 aa13.35□□□□□ -0.27
PAAF1-209ENST00000540659 MYO5BQ9ULV0 1848 aa13.34□□□□□ -0.27
PAAF1-209ENST00000540659 YTHDC1Q96MU7 727 aaKnown RBP13.34□□□□□ -0.27
PAAF1-209ENST00000540659 POLR3GLQ9BT43 218 aa13.34□□□□□ -0.27
PAAF1-209ENST00000540659 A2ML1A8K2U0 1454 aa13.34□□□□□ -0.27
PAAF1-209ENST00000540659 CCDC7Q96M83 1385 aa13.33□□□□□ -0.27
PAAF1-209ENST00000540659 NOS1P29475 1434 aa13.33□□□□□ -0.28
PAAF1-209ENST00000540659 NLRP1Q9C000 1473 aa13.32□□□□□ -0.28
PAAF1-209ENST00000540659 KIAA1210Q9ULL0 1709 aa13.32□□□□□ -0.28
PAAF1-209ENST00000540659 IQGAP1P46940 1657 aa13.31□□□□□ -0.28
PAAF1-209ENST00000540659 MYOM2P54296 1465 aa13.31□□□□□ -0.28
PAAF1-209ENST00000540659 KIF7Q2M1P5 1343 aa13.31□□□□□ -0.28
PAAF1-209ENST00000540659 ST20-MTHFSA0A0A6YYL1 179 aa13.3□□□□□ -0.28
PAAF1-209ENST00000540659 ANP32CO43423 234 aa13.29□□□□□ -0.28
PAAF1-209ENST00000540659 UBR1Q8IWV7 1749 aa13.29□□□□□ -0.28
PAAF1-209ENST00000540659 GPRASP1Q5JY77 1395 aa13.29□□□□□ -0.28
PAAF1-209ENST00000540659 ADGRF5Q8IZF2 1346 aa13.28□□□□□ -0.28
PAAF1-209ENST00000540659 TMEM131LA2VDJ0 1609 aa13.27□□□□□ -0.29
PAAF1-209ENST00000540659 NEXMIFQ5QGS0 1516 aa13.26□□□□□ -0.29
PAAF1-209ENST00000540659 NUTM2DQ5VT03 806 aaPredicted RBP13.26□□□□□ -0.29
PAAF1-209ENST00000540659 IDI1Q13907 227 aa13.25□□□□□ -0.29
PAAF1-209ENST00000540659 CFAP70Q5T0N1 1121 aa13.24□□□□□ -0.29
PAAF1-209ENST00000540659 SLC52A1Q9NWF4 448 aa13.24□□□□□ -0.29
PAAF1-209ENST00000540659 KDM5AP29375 1690 aaKnown RBP13.24□□□□□ -0.29
PAAF1-209ENST00000540659 NRXN1Q9ULB1 1477 aa13.23□□□□□ -0.29
PAAF1-209ENST00000540659 SCAF11Q99590 1463 aaKnown RBP13.23□□□□□ -0.29
PAAF1-209ENST00000540659 RPGRIP1LQ68CZ1 1315 aa13.22□□□□□ -0.29
PAAF1-209ENST00000540659 SENP3Q9H4L4 574 aaPredicted RBP13.22□□□□□ -0.29
PAAF1-209ENST00000540659 STAG3Q9UJ98 1225 aa13.22□□□□□ -0.29
PAAF1-209ENST00000540659 PIK3C2GO75747 1445 aa13.21□□□□□ -0.3
PAAF1-209ENST00000540659 SETBP1Q9Y6X0 1596 aa13.2□□□□□ -0.3
PAAF1-209ENST00000540659 NCKAP5LQ9HCH0 1330 aa13.2□□□□□ -0.3
PAAF1-209ENST00000540659 CNGB1Q14028 1251 aaPredicted RBP13.2□□□□□ -0.3
PAAF1-209ENST00000540659 DISP3Q9P2K9 1392 aa13.2□□□□□ -0.3
PAAF1-209ENST00000540659 SLIT1O75093 1534 aa13.19□□□□□ -0.3
PAAF1-209ENST00000540659 ARHGAP23Q9P227 1491 aa13.19□□□□□ -0.3
PAAF1-209ENST00000540659 CENPBP07199 599 aaPredicted RBP13.19□□□□□ -0.3
PAAF1-209ENST00000540659 HDGFP51858 240 aaKnown RBP13.19□□□□□ -0.3
PAAF1-209ENST00000540659 EIF3AQ14152 1382 aaKnown RBP13.19□□□□□ -0.3
PAAF1-209ENST00000540659 SLC24A1O60721 1099 aa13.18□□□□□ -0.3
PAAF1-209ENST00000540659 TMF1P82094 1093 aa13.18□□□□□ -0.3
PAAF1-209ENST00000540659 THEMISQ8N1K5 641 aaPredicted RBP13.18□□□□□ -0.3
PAAF1-209ENST00000540659 QRICH2Q9H0J4 1663 aa13.18□□□□□ -0.3
PAAF1-209ENST00000540659 VGFO15240 615 aaPredicted RBP13.17□□□□□ -0.3
PAAF1-209ENST00000540659 TESK2Q96S53 571 aa13.17□□□□□ -0.3
PAAF1-209ENST00000540659 CCER2I3L3R5 266 aa13.16□□□□□ -0.3
PAAF1-209ENST00000540659 DMRT2Q9Y5R5 561 aa13.16□□□□□ -0.3
PAAF1-209ENST00000540659 MED14O60244 1454 aa13.16□□□□□ -0.3
PAAF1-209ENST00000540659 ADGRB1O14514 1584 aa13.15□□□□□ -0.3
PAAF1-209ENST00000540659 TMEM132EQ6IEE7 984 aa13.15□□□□□ -0.3
PAAF1-209ENST00000540659 C14orf93Q9H972 538 aaKnown RBP13.15□□□□□ -0.3
PAAF1-209ENST00000540659 ARHGEF28Q8N1W1 1705 aaKnown RBP13.15□□□□□ -0.3
PAAF1-209ENST00000540659 TRAK1Q9UPV9 953 aa13.14□□□□□ -0.31
PAAF1-209ENST00000540659 NPHP4O75161 1426 aaPredicted RBP13.13□□□□□ -0.31
PAAF1-209ENST00000540659 TMEM2Q9UHN6 1383 aa13.13□□□□□ -0.31
PAAF1-209ENST00000540659 ANKLE2Q86XL3 938 aa13.13□□□□□ -0.31
PAAF1-209ENST00000540659 LTBP4Q8N2S1 1624 aa13.13□□□□□ -0.31
PAAF1-209ENST00000540659 RIMS2Q9UQ26 1411 aa13.13□□□□□ -0.31
PAAF1-209ENST00000540659 MYOM1P52179 1685 aa13.12□□□□□ -0.31
PAAF1-209ENST00000540659 PRKRIP1Q9H875 184 aaPredicted RBP13.12□□□□□ -0.31
PAAF1-209ENST00000540659 ZFYVE9O95405 1425 aa13.12□□□□□ -0.31
PAAF1-209ENST00000540659 ALKQ9UM73 1620 aa13.11□□□□□ -0.31
PAAF1-209ENST00000540659 ASXL1Q8IXJ9 1541 aa13.11□□□□□ -0.31
PAAF1-209ENST00000540659 LTKP29376 864 aa13.1□□□□□ -0.31
PAAF1-209ENST00000540659 CENPJQ9HC77 1338 aaPredicted RBP13.1□□□□□ -0.31
PAAF1-209ENST00000540659 SETD1AO15047 1707 aaKnown RBP13.09□□□□□ -0.31
PAAF1-209ENST00000540659 ZNF335Q9H4Z2 1342 aaPredicted RBP13.09□□□□□ -0.31
PAAF1-209ENST00000540659 STRCP1A6NGW2 1772 aa13.08□□□□□ -0.32
PAAF1-209ENST00000540659 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
PAAF1-209ENST00000540659 STK26Q9P289 416 aa13.08□□□□□ -0.32
PAAF1-209ENST00000540659 NRXN3Q9Y4C0 1643 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 CCDC184Q52MB2 194 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 CDCA8Q53HL2 280 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 TXNDC2Q86VQ3 553 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 PANK3Q9H999 370 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 EID1Q9Y6B2 187 aa13.07□□□□□ -0.32
PAAF1-209ENST00000540659 BCANQ96GW7 911 aa13.05□□□□□ -0.32
PAAF1-209ENST00000540659 CPS1P31327 1500 aa13.04□□□□□ -0.32
PAAF1-209ENST00000540659 SAFB2Q14151 953 aaKnown RBP eCLIP13.04□□□□□ -0.32
PAAF1-209ENST00000540659 MRS2Q9HD23 443 aa13.04□□□□□ -0.32
PAAF1-209ENST00000540659 PLEKHG1Q9ULL1 1385 aa13.04□□□□□ -0.32
PAAF1-209ENST00000540659 YTHDC2Q9H6S0 1430 aaKnown RBP13.04□□□□□ -0.32
PAAF1-209ENST00000540659 CERKQ8TCT0 537 aa13.03□□□□□ -0.32
PAAF1-209ENST00000540659 DIP2AQ14689 1571 aa13.03□□□□□ -0.32
PAAF1-209ENST00000540659 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.33
PAAF1-209ENST00000540659 KTN1Q86UP2 1357 aaKnown RBP13.02□□□□□ -0.33
PAAF1-209ENST00000540659 SBNO2Q9Y2G9 1366 aa13.02□□□□□ -0.33
PAAF1-209ENST00000540659 IQSEC2Q5JU85 1478 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms