RNA–Protein interactions for RNA: ENST00000540627.5

KPNB1-203, Transcript of karyopherin subunit beta 1, humanhuman

TSL 2 BASIC

Gene KPNB1, Length 2,989 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KPNB1-203ENST00000540627 A2MP01023 1474 aa9.64□□□□□ -0.87
KPNB1-203ENST00000540627 PLEKHH2Q8IVE3 1493 aa9.63□□□□□ -0.87
KPNB1-203ENST00000540627 COL17A1Q9UMD9 1497 aaPredicted RBP9.63□□□□□ -0.87
KPNB1-203ENST00000540627 CC2D1BQ5T0F9 858 aaKnown RBP9.63□□□□□ -0.87
KPNB1-203ENST00000540627 TMF1P82094 1093 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 TESK2Q96S53 571 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 LAMC1P11047 1609 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 MKRN4PQ13434 485 aaPredicted RBP9.62□□□□□ -0.87
KPNB1-203ENST00000540627 LMOD2Q6P5Q4 547 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 TTC37Q6PGP7 1564 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 EXOC6Q8TAG9 804 aa9.62□□□□□ -0.87
KPNB1-203ENST00000540627 IPO9Q96P70 1041 aaKnown RBP9.62□□□□□ -0.87
KPNB1-203ENST00000540627 EIF2AK4Q9P2K8 1649 aaKnown RBP9.62□□□□□ -0.87
KPNB1-203ENST00000540627 PRDM15P57071 1507 aaPredicted RBP9.61□□□□□ -0.87
KPNB1-203ENST00000540627 ERBINQ96RT1 1412 aa9.61□□□□□ -0.87
KPNB1-203ENST00000540627 DISP3Q9P2K9 1392 aa9.61□□□□□ -0.87
KPNB1-203ENST00000540627 PANK3Q9H999 370 aa9.61□□□□□ -0.87
KPNB1-203ENST00000540627 IQGAP3Q86VI3 1631 aa9.61□□□□□ -0.87
KPNB1-203ENST00000540627 PLXNC1O60486 1568 aa9.61□□□□□ -0.87
KPNB1-203ENST00000540627 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.61□□□□□ -0.87
KPNB1-203ENST00000540627 OSCARQ8IYS5 282 aa9.6□□□□□ -0.87
KPNB1-203ENST00000540627 DUOX2Q9NRD8 1548 aa9.6□□□□□ -0.87
KPNB1-203ENST00000540627 INSRP06213 1382 aa9.6□□□□□ -0.87
KPNB1-203ENST00000540627 PAK3O75914 559 aaPredicted RBP9.6□□□□□ -0.87
KPNB1-203ENST00000540627 TCERG1O14776 1098 aaKnown RBP9.6□□□□□ -0.87
KPNB1-203ENST00000540627 ZBTB47Q9UFB7 747 aaPredicted RBP9.6□□□□□ -0.87
KPNB1-203ENST00000540627 CCDC9Q9Y3X0 531 aaKnown RBP9.6□□□□□ -0.87
KPNB1-203ENST00000540627 ATP10AO60312 1499 aa9.59□□□□□ -0.87
KPNB1-203ENST00000540627 MYO5CQ9NQX4 1742 aa9.59□□□□□ -0.87
KPNB1-203ENST00000540627 CDCA7LQ96GN5 454 aa9.59□□□□□ -0.87
KPNB1-203ENST00000540627 ZMYM4Q5VZL5 1548 aa9.58□□□□□ -0.88
KPNB1-203ENST00000540627 BLMP54132 1417 aaPredicted RBP9.58□□□□□ -0.88
KPNB1-203ENST00000540627 EFCAB2Q5VUJ9 269 aa9.57□□□□□ -0.88
KPNB1-203ENST00000540627 ABCC2Q92887 1545 aa9.57□□□□□ -0.88
KPNB1-203ENST00000540627 ZNF219Q9P2Y4 722 aaPredicted RBP9.57□□□□□ -0.88
KPNB1-203ENST00000540627 MAGI2Q86UL8 1455 aa9.57□□□□□ -0.88
KPNB1-203ENST00000540627 C1orf115Q9H7X2 142 aa9.57□□□□□ -0.88
KPNB1-203ENST00000540627 DEKP35659 375 aaKnown RBP9.56□□□□□ -0.88
KPNB1-203ENST00000540627 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.56□□□□□ -0.88
KPNB1-203ENST00000540627 KNSTRNQ9Y448 316 aa9.56□□□□□ -0.88
KPNB1-203ENST00000540627 CHD1O14646 1710 aa9.56□□□□□ -0.88
KPNB1-203ENST00000540627 SHROOM2Q13796 1616 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 MS4A1P11836 297 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 ZMYND15Q9H091 742 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 PLCH2O75038 1416 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 CDCA8Q53HL2 280 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 RSPH6AQ9H0K4 717 aa9.55□□□□□ -0.88
KPNB1-203ENST00000540627 PLIN1O60240 522 aa9.54□□□□□ -0.88
KPNB1-203ENST00000540627 PDE4AP27815 886 aa9.54□□□□□ -0.88
KPNB1-203ENST00000540627 WDR43Q15061 677 aaKnown RBP eCLIP9.54□□□□□ -0.88
KPNB1-203ENST00000540627 RTL5Q5HYW3 569 aaPredicted RBP9.54□□□□□ -0.88
KPNB1-203ENST00000540627 RNF17Q9BXT8 1623 aaKnown RBP9.54□□□□□ -0.88
KPNB1-203ENST00000540627 NKX1-1Q15270 411 aaPredicted RBP9.54□□□□□ -0.88
KPNB1-203ENST00000540627 STAC3Q96MF2 364 aa9.54□□□□□ -0.88
KPNB1-203ENST00000540627 ADAMTS8Q9UP79 889 aa9.54□□□□□ -0.88
KPNB1-203ENST00000540627 HS6ST3Q8IZP7 471 aa9.53□□□□□ -0.88
KPNB1-203ENST00000540627 BACH2Q9BYV9 841 aa9.53□□□□□ -0.88
KPNB1-203ENST00000540627 SPAG9O60271 1321 aaKnown RBP9.53□□□□□ -0.88
KPNB1-203ENST00000540627 CRBNQ96SW2 442 aa9.52□□□□□ -0.88
KPNB1-203ENST00000540627 WDR7Q9Y4E6 1490 aa9.52□□□□□ -0.89
KPNB1-203ENST00000540627 PPP2R1AP30153 589 aa9.52□□□□□ -0.89
KPNB1-203ENST00000540627 SAMD1Q6SPF0 538 aaPredicted RBP9.52□□□□□ -0.89
KPNB1-203ENST00000540627 TRAPPC8Q9Y2L5 1435 aa9.52□□□□□ -0.89
KPNB1-203ENST00000540627 ERCC6L2Q5T890 1561 aa9.52□□□□□ -0.89
KPNB1-203ENST00000540627 ZBTB7CA1YPR0 619 aa9.51□□□□□ -0.89
KPNB1-203ENST00000540627 NECTIN2Q92692 538 aa9.51□□□□□ -0.89
KPNB1-203ENST00000540627 ABCC1P33527 1531 aa9.51□□□□□ -0.89
KPNB1-203ENST00000540627 MADDQ8WXG6 1647 aa9.51□□□□□ -0.89
KPNB1-203ENST00000540627 SCAF11Q99590 1463 aaKnown RBP9.51□□□□□ -0.89
KPNB1-203ENST00000540627 TRPM2O94759 1503 aa9.5□□□□□ -0.89
KPNB1-203ENST00000540627 EIF3AQ14152 1382 aaKnown RBP9.5□□□□□ -0.89
KPNB1-203ENST00000540627 EIF5BO60841 1220 aaKnown RBP9.5□□□□□ -0.89
KPNB1-203ENST00000540627 IQGAP1P46940 1657 aa9.5□□□□□ -0.89
KPNB1-203ENST00000540627 RTEL1-TNFRSF6BF6WH68 1400 aa9.49□□□□□ -0.89
KPNB1-203ENST00000540627 SCAPERQ9BY12 1400 aa9.49□□□□□ -0.89
KPNB1-203ENST00000540627 GOLGA2Q08379 1002 aa9.49□□□□□ -0.89
KPNB1-203ENST00000540627 ZCCHC11Q5TAX3 1644 aaKnown RBP9.49□□□□□ -0.89
KPNB1-203ENST00000540627 SYNMO15061 1565 aa9.49□□□□□ -0.89
KPNB1-203ENST00000540627 AFAP1Q8N556 730 aa9.49□□□□□ -0.89
KPNB1-203ENST00000540627 GOLGA6L2Q8N9W4 650 aaPredicted RBP9.48□□□□□ -0.89
KPNB1-203ENST00000540627 SLC24A3Q9HC58 644 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 DMRT2Q9Y5R5 561 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 KANK1Q14678 1352 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 PLEKHH1Q9ULM0 1364 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 ASXL1Q8IXJ9 1541 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 DUSP27Q5VZP5 1158 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 PTPRTO14522 1441 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 SPHKAPQ2M3C7 1700 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 UHRF1BP1LA0JNW5 1464 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 GTPBP6O43824 516 aaPredicted RBP9.48□□□□□ -0.89
KPNB1-203ENST00000540627 C20orf194Q5TEA3 1177 aa9.48□□□□□ -0.89
KPNB1-203ENST00000540627 CIZ1Q9ULV3 898 aaPredicted RBP9.48□□□□□ -0.89
KPNB1-203ENST00000540627 PIK3C2GO75747 1445 aa9.47□□□□□ -0.89
KPNB1-203ENST00000540627 CEP152O94986 1710 aa9.47□□□□□ -0.89
KPNB1-203ENST00000540627 CLASP1Q7Z460 1538 aa9.47□□□□□ -0.89
KPNB1-203ENST00000540627 NPC1L1Q9UHC9 1359 aa9.47□□□□□ -0.89
KPNB1-203ENST00000540627 ZFYVE16Q7Z3T8 1539 aa9.46□□□□□ -0.89
KPNB1-203ENST00000540627 CENPQQ7L2Z9 268 aaPredicted RBP9.46□□□□□ -0.89
KPNB1-203ENST00000540627 ZNF521Q96K83 1311 aa9.46□□□□□ -0.89
KPNB1-203ENST00000540627 CLTCL1P53675 1640 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms