RNA–Protein interactions for RNA: ENST00000540585.1

NHLRC4-202, Transcript of NHL repeat containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NHLRC4, Length 2,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4-202ENST00000540585 SYNMO15061 1565 aa30.33■■■□□ 2.45
NHLRC4-202ENST00000540585 PRAG1Q86YV5 1406 aa30.33■■■□□ 2.45
NHLRC4-202ENST00000540585 PLPPR3Q6T4P5 718 aa30.32■■■□□ 2.44
NHLRC4-202ENST00000540585 TRPM1Q7Z4N2 1603 aa30.31■■■□□ 2.44
NHLRC4-202ENST00000540585 CARD11Q9BXL7 1154 aa30.3■■■□□ 2.44
NHLRC4-202ENST00000540585 RGL3Q3MIN7 710 aa30.29■■■□□ 2.44
NHLRC4-202ENST00000540585 UGGT1Q9NYU2 1555 aa30.28■■■□□ 2.44
NHLRC4-202ENST00000540585 CLTCL1P53675 1640 aa30.27■■■□□ 2.44
NHLRC4-202ENST00000540585 ROCK2O75116 1388 aaKnown RBP30.25■■■□□ 2.43
NHLRC4-202ENST00000540585 PIK3C2BO00750 1634 aa30.25■■■□□ 2.43
NHLRC4-202ENST00000540585 TNRQ92752 1358 aa30.24■■■□□ 2.43
NHLRC4-202ENST00000540585 LAMC1P11047 1609 aa30.19■■■□□ 2.42
NHLRC4-202ENST00000540585 GPRASP1Q5JY77 1395 aa30.18■■■□□ 2.42
NHLRC4-202ENST00000540585 IDI1Q13907 227 aa30.17■■■□□ 2.42
NHLRC4-202ENST00000540585 SLC52A1Q9NWF4 448 aa30.16■■■□□ 2.42
NHLRC4-202ENST00000540585 MYO3AQ8NEV4 1616 aa30.15■■■□□ 2.42
NHLRC4-202ENST00000540585 KIF1BO60333 1816 aa30.14■■■□□ 2.41
NHLRC4-202ENST00000540585 SETD1BQ9UPS6 1966 aaKnown RBP30.13■■■□□ 2.41
NHLRC4-202ENST00000540585 NLRP1Q9C000 1473 aa30.12■■■□□ 2.41
NHLRC4-202ENST00000540585 ST20-MTHFSA0A0A6YYL1 179 aa30.12■■■□□ 2.41
NHLRC4-202ENST00000540585 NBPF1Q3BBV0 1214 aa30.09■■■□□ 2.41
NHLRC4-202ENST00000540585 TMEM131LA2VDJ0 1609 aa30.09■■■□□ 2.41
NHLRC4-202ENST00000540585 NEURL4Q96JN8 1562 aa30.08■■■□□ 2.41
NHLRC4-202ENST00000540585 PRKRIP1Q9H875 184 aaPredicted RBP30.08■■■□□ 2.41
NHLRC4-202ENST00000540585 MYO5BQ9ULV0 1848 aa30.08■■■□□ 2.41
NHLRC4-202ENST00000540585 ADGRB3O60242 1522 aa30.08■■■□□ 2.41
NHLRC4-202ENST00000540585 POLR3GLQ9BT43 218 aa30.06■■■□□ 2.4
NHLRC4-202ENST00000540585 UBR1Q8IWV7 1749 aa30.05■■■□□ 2.4
NHLRC4-202ENST00000540585 CHGAP10645 457 aaKnown RBP30.05■■■□□ 2.4
NHLRC4-202ENST00000540585 ZNF142P52746 1687 aaPredicted RBP30.05■■■□□ 2.4
NHLRC4-202ENST00000540585 CEP170BQ9Y4F5 1589 aaPredicted RBP30.04■■■□□ 2.4
NHLRC4-202ENST00000540585 KDM5AP29375 1690 aaKnown RBP30.04■■■□□ 2.4
NHLRC4-202ENST00000540585 A2ML1A8K2U0 1454 aa30.04■■■□□ 2.4
NHLRC4-202ENST00000540585 STAC3Q96MF2 364 aa30■■■□□ 2.39
NHLRC4-202ENST00000540585 STAG3Q9UJ98 1225 aa29.99■■■□□ 2.39
NHLRC4-202ENST00000540585 RBM19Q9Y4C8 960 aaKnown RBP29.97■■■□□ 2.39
NHLRC4-202ENST00000540585 IFT172Q9UG01 1749 aa29.92■■■□□ 2.38
NHLRC4-202ENST00000540585 FKBP8Q14318 412 aa29.92■■■□□ 2.38
NHLRC4-202ENST00000540585 IQGAP1P46940 1657 aa29.92■■■□□ 2.38
NHLRC4-202ENST00000540585 CCDC184Q52MB2 194 aa29.91■■■□□ 2.38
NHLRC4-202ENST00000540585 PPLO60437 1756 aa29.91■■■□□ 2.38
NHLRC4-202ENST00000540585 MYOM2P54296 1465 aa29.91■■■□□ 2.38
NHLRC4-202ENST00000540585 NEXMIFQ5QGS0 1516 aa29.9■■■□□ 2.38
NHLRC4-202ENST00000540585 KIAA1210Q9ULL0 1709 aa29.89■■■□□ 2.38
NHLRC4-202ENST00000540585 TESK2Q96S53 571 aa29.89■■■□□ 2.37
NHLRC4-202ENST00000540585 THEMISQ8N1K5 641 aaPredicted RBP29.88■■■□□ 2.37
NHLRC4-202ENST00000540585 TMEM2Q9UHN6 1383 aa29.87■■■□□ 2.37
NHLRC4-202ENST00000540585 LMTK3Q96Q04 1460 aa29.87■■■□□ 2.37
NHLRC4-202ENST00000540585 RPGRIP1LQ68CZ1 1315 aa29.87■■■□□ 2.37
NHLRC4-202ENST00000540585 ZFYVE9O95405 1425 aa29.86■■■□□ 2.37
NHLRC4-202ENST00000540585 SLIT1O75093 1534 aa29.86■■■□□ 2.37
NHLRC4-202ENST00000540585 MRS2Q9HD23 443 aa29.86■■■□□ 2.37
NHLRC4-202ENST00000540585 RIMS2Q9UQ26 1411 aa29.86■■■□□ 2.37
NHLRC4-202ENST00000540585 ARHGAP23Q9P227 1491 aa29.86■■■□□ 2.37
NHLRC4-202ENST00000540585 BCANQ96GW7 911 aa29.85■■■□□ 2.37
NHLRC4-202ENST00000540585 DISP3Q9P2K9 1392 aa29.85■■■□□ 2.37
NHLRC4-202ENST00000540585 SCAF11Q99590 1463 aaKnown RBP29.83■■■□□ 2.37
NHLRC4-202ENST00000540585 NUTM2DQ5VT03 806 aaPredicted RBP29.82■■■□□ 2.36
NHLRC4-202ENST00000540585 HNRNPUQ00839 825 aaKnown RBP eCLIP29.81■■■□□ 2.36
NHLRC4-202ENST00000540585 NRXN1Q9ULB1 1477 aa29.79■■■□□ 2.36
NHLRC4-202ENST00000540585 TMF1P82094 1093 aa29.78■■■□□ 2.36
NHLRC4-202ENST00000540585 ADGRF5Q8IZF2 1346 aa29.77■■■□□ 2.36
NHLRC4-202ENST00000540585 LTKP29376 864 aa29.76■■■□□ 2.36
NHLRC4-202ENST00000540585 NEFLP07196 543 aa29.76■■■□□ 2.35
NHLRC4-202ENST00000540585 HSPA2P54652 639 aa29.76■■■□□ 2.35
NHLRC4-202ENST00000540585 VGFO15240 615 aaPredicted RBP29.75■■■□□ 2.35
NHLRC4-202ENST00000540585 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.75■■■□□ 2.35
NHLRC4-202ENST00000540585 CNGB1Q14028 1251 aaPredicted RBP29.75■■■□□ 2.35
NHLRC4-202ENST00000540585 TXNDC2Q86VQ3 553 aa29.75■■■□□ 2.35
NHLRC4-202ENST00000540585 KTN1Q86UP2 1357 aaKnown RBP29.74■■■□□ 2.35
NHLRC4-202ENST00000540585 FAM9BQ8IZU0 186 aa29.73■■■□□ 2.35
NHLRC4-202ENST00000540585 EIF3AQ14152 1382 aaKnown RBP29.73■■■□□ 2.35
NHLRC4-202ENST00000540585 HDGFP51858 240 aaKnown RBP29.73■■■□□ 2.35
NHLRC4-202ENST00000540585 EID1Q9Y6B2 187 aa29.72■■■□□ 2.35
NHLRC4-202ENST00000540585 PIK3C2GO75747 1445 aa29.69■■■□□ 2.34
NHLRC4-202ENST00000540585 CFAP70Q5T0N1 1121 aa29.69■■■□□ 2.34
NHLRC4-202ENST00000540585 ANKLE2Q86XL3 938 aa29.69■■■□□ 2.34
NHLRC4-202ENST00000540585 FANCIQ9NVI1 1328 aa29.69■■■□□ 2.34
NHLRC4-202ENST00000540585 MSH5O43196 834 aa29.68■■■□□ 2.34
NHLRC4-202ENST00000540585 SENP3Q9H4L4 574 aaPredicted RBP29.68■■■□□ 2.34
NHLRC4-202ENST00000540585 RALBP1Q15311 655 aa29.67■■■□□ 2.34
NHLRC4-202ENST00000540585 PLEKHG1Q9ULL1 1385 aa29.66■■■□□ 2.34
NHLRC4-202ENST00000540585 NRXN3Q9Y4C0 1643 aa29.66■■■□□ 2.34
NHLRC4-202ENST00000540585 AEBP2Q6ZN18 517 aaPredicted RBP29.65■■■□□ 2.34
NHLRC4-202ENST00000540585 NCKAP5LQ9HCH0 1330 aa29.65■■■□□ 2.34
NHLRC4-202ENST00000540585 SETBP1Q9Y6X0 1596 aa29.65■■■□□ 2.34
NHLRC4-202ENST00000540585 PER1O15534 1290 aaPredicted RBP29.64■■■□□ 2.33
NHLRC4-202ENST00000540585 MYBBP1AQ9BQG0 1328 aaKnown RBP29.63■■■□□ 2.33
NHLRC4-202ENST00000540585 STRCQ7RTU9 1775 aa29.63■■■□□ 2.33
NHLRC4-202ENST00000540585 PARD3Q8TEW0 1356 aa29.62■■■□□ 2.33
NHLRC4-202ENST00000540585 MED14O60244 1454 aa29.61■■■□□ 2.33
NHLRC4-202ENST00000540585 CDCA8Q53HL2 280 aa29.6■■■□□ 2.33
NHLRC4-202ENST00000540585 PANK3Q9H999 370 aa29.6■■■□□ 2.33
NHLRC4-202ENST00000540585 BRD4O60885 1362 aaPredicted RBP29.59■■■□□ 2.33
NHLRC4-202ENST00000540585 ALKQ9UM73 1620 aa29.59■■■□□ 2.33
NHLRC4-202ENST00000540585 SETD1AO15047 1707 aaKnown RBP29.58■■■□□ 2.33
NHLRC4-202ENST00000540585 NPHP4O75161 1426 aaPredicted RBP29.58■■■□□ 2.33
NHLRC4-202ENST00000540585 ADAMTS13Q76LX8 1427 aa29.58■■■□□ 2.33
NHLRC4-202ENST00000540585 ZBED9Q6R2W3 1325 aa29.58■■■□□ 2.33
NHLRC4-202ENST00000540585 C14orf93Q9H972 538 aaKnown RBP29.57■■■□□ 2.32
Retrieved 100 of 20,778 RNA–protein pairs in 122.7 ms