RNA–Protein interactions for RNA: ENST00000540415.1

LRP6-204, Transcript of LDL receptor related protein 6, humanhuman

TSL 5

Gene LRP6, Length 473 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP6-204ENST00000540415 ZNF772Q68DY9 489 aaPredicted RBP12.72□□□□□ -0.37
LRP6-204ENST00000540415 KANK1Q14678 1352 aa12.71□□□□□ -0.37
LRP6-204ENST00000540415 NUTM2BA6NNL0 878 aaPredicted RBP12.71□□□□□ -0.37
LRP6-204ENST00000540415 NUTM2EB1AL46 878 aaPredicted RBP12.71□□□□□ -0.37
LRP6-204ENST00000540415 NUTM2AQ8IVF1 878 aaPredicted RBP12.71□□□□□ -0.37
LRP6-204ENST00000540415 CHIC2Q9UKJ5 165 aa12.71□□□□□ -0.37
LRP6-204ENST00000540415 LMTK2Q8IWU2 1503 aa12.71□□□□□ -0.38
LRP6-204ENST00000540415 ZFYVE9O95405 1425 aa12.71□□□□□ -0.38
LRP6-204ENST00000540415 FGD6Q6ZV73 1430 aa12.71□□□□□ -0.38
LRP6-204ENST00000540415 RXRBP28702 533 aa12.7□□□□□ -0.38
LRP6-204ENST00000540415 PLEKHG1Q9ULL1 1385 aa12.69□□□□□ -0.38
LRP6-204ENST00000540415 NUTM2DQ5VT03 806 aaPredicted RBP12.69□□□□□ -0.38
LRP6-204ENST00000540415 C14orf37Q86TY3 774 aa12.69□□□□□ -0.38
LRP6-204ENST00000540415 KDM5AP29375 1690 aaKnown RBP12.69□□□□□ -0.38
LRP6-204ENST00000540415 DAPK1P53355 1430 aa12.69□□□□□ -0.38
LRP6-204ENST00000540415 VPS8Q8N3P4 1428 aa12.69□□□□□ -0.38
LRP6-204ENST00000540415 RIMS2Q9UQ26 1411 aa12.68□□□□□ -0.38
LRP6-204ENST00000540415 AFF2P51816 1311 aa12.67□□□□□ -0.38
LRP6-204ENST00000540415 AHDC1Q5TGY3 1603 aaPredicted RBP12.67□□□□□ -0.38
LRP6-204ENST00000540415 PPP1R15AO75807 674 aaPredicted RBP12.67□□□□□ -0.38
LRP6-204ENST00000540415 SLC52A1Q9NWF4 448 aa12.67□□□□□ -0.38
LRP6-204ENST00000540415 CROCC2H7BZ55 1655 aa12.67□□□□□ -0.38
LRP6-204ENST00000540415 BRINP3Q76B58 766 aa12.66□□□□□ -0.38
LRP6-204ENST00000540415 DIP2AQ14689 1571 aa12.65□□□□□ -0.38
LRP6-204ENST00000540415 RGS12O14924 1447 aa12.65□□□□□ -0.38
LRP6-204ENST00000540415 ADAMTS13Q76LX8 1427 aa12.65□□□□□ -0.38
LRP6-204ENST00000540415 TBX22Q9Y458 520 aa12.65□□□□□ -0.38
LRP6-204ENST00000540415 CHD2O14647 1828 aaKnown RBP12.65□□□□□ -0.39
LRP6-204ENST00000540415 SHPRHQ149N8 1683 aa12.64□□□□□ -0.39
LRP6-204ENST00000540415 PTPN23Q9H3S7 1636 aa12.64□□□□□ -0.39
LRP6-204ENST00000540415 ATF3P18847 181 aa12.64□□□□□ -0.39
LRP6-204ENST00000540415 CADPS2Q86UW7 1296 aa12.64□□□□□ -0.39
LRP6-204ENST00000540415 C19orf44Q9H6X5 657 aa12.64□□□□□ -0.39
LRP6-204ENST00000540415 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
LRP6-204ENST00000540415 NCOA3Q9Y6Q9 1424 aa12.63□□□□□ -0.39
LRP6-204ENST00000540415 CHGAP10645 457 aaKnown RBP12.63□□□□□ -0.39
LRP6-204ENST00000540415 DDX17Q92841 729 aaKnown RBP12.63□□□□□ -0.39
LRP6-204ENST00000540415 ANKRD30AQ9BXX3 1397 aa12.63□□□□□ -0.39
LRP6-204ENST00000540415 PTPRUQ92729 1446 aa12.62□□□□□ -0.39
LRP6-204ENST00000540415 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.62□□□□□ -0.39
LRP6-204ENST00000540415 LOC105371045A0A1W2PR82 267 aa12.62□□□□□ -0.39
LRP6-204ENST00000540415 C8orf37Q96NL8 207 aa12.62□□□□□ -0.39
LRP6-204ENST00000540415 QTRT2Q9H974 415 aaKnown RBP12.61□□□□□ -0.39
LRP6-204ENST00000540415 TMEM131LA2VDJ0 1609 aa12.61□□□□□ -0.39
LRP6-204ENST00000540415 AMOTL2Q9Y2J4 779 aa12.6□□□□□ -0.39
LRP6-204ENST00000540415 GCC2Q8IWJ2 1684 aa12.6□□□□□ -0.39
LRP6-204ENST00000540415 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
LRP6-204ENST00000540415 ASXL1Q8IXJ9 1541 aa12.59□□□□□ -0.39
LRP6-204ENST00000540415 RBM6P78332 1123 aaKnown RBP12.58□□□□□ -0.4
LRP6-204ENST00000540415 SETD5Q9C0A6 1442 aa12.58□□□□□ -0.4
LRP6-204ENST00000540415 MST1RQ04912 1400 aa12.57□□□□□ -0.4
LRP6-204ENST00000540415 HDGFP51858 240 aaKnown RBP12.57□□□□□ -0.4
LRP6-204ENST00000540415 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.57□□□□□ -0.4
LRP6-204ENST00000540415 RPRD2Q5VT52 1461 aaKnown RBP12.57□□□□□ -0.4
LRP6-204ENST00000540415 PNPLA6Q8IY17 1366 aa12.56□□□□□ -0.4
LRP6-204ENST00000540415 PIK3R4Q99570 1358 aa12.56□□□□□ -0.4
LRP6-204ENST00000540415 ADAMTS2O95450 1211 aa12.56□□□□□ -0.4
LRP6-204ENST00000540415 ANKRD50Q9ULJ7 1429 aa12.55□□□□□ -0.4
LRP6-204ENST00000540415 ADGRL2O95490 1459 aa12.55□□□□□ -0.4
LRP6-204ENST00000540415 LRRC59Q96AG4 307 aaKnown RBP12.54□□□□□ -0.4
LRP6-204ENST00000540415 TRPM2O94759 1503 aa12.53□□□□□ -0.4
LRP6-204ENST00000540415 SETBP1Q9Y6X0 1596 aa12.53□□□□□ -0.4
LRP6-204ENST00000540415 NGLY1Q96IV0 654 aa12.53□□□□□ -0.4
LRP6-204ENST00000540415 EP400Q96L91 3159 aa12.53□□□□□ -0.4
LRP6-204ENST00000540415 DCCP43146 1447 aa12.53□□□□□ -0.4
LRP6-204ENST00000540415 UNC13BO14795 1591 aa12.52□□□□□ -0.4
LRP6-204ENST00000540415 NHSL1Q5SYE7 1610 aa12.52□□□□□ -0.4
LRP6-204ENST00000540415 METP08581 1390 aa12.52□□□□□ -0.41
LRP6-204ENST00000540415 ATAD2Q6PL18 1390 aa12.52□□□□□ -0.41
LRP6-204ENST00000540415 FAM50AQ14320 339 aaKnown RBP12.51□□□□□ -0.41
LRP6-204ENST00000540415 ZRANB1Q9UGI0 708 aa12.5□□□□□ -0.41
LRP6-204ENST00000540415 NRXN3Q9Y4C0 1643 aa12.5□□□□□ -0.41
LRP6-204ENST00000540415 XRN1Q8IZH2 1706 aaKnown RBP12.5□□□□□ -0.41
LRP6-204ENST00000540415 USP21Q9UK80 565 aa12.49□□□□□ -0.41
LRP6-204ENST00000540415 E9PCH4 1651 aa12.48□□□□□ -0.41
LRP6-204ENST00000540415 ADGRL3Q9HAR2 1447 aa12.48□□□□□ -0.41
LRP6-204ENST00000540415 C1orf167Q5SNV9 1468 aa12.47□□□□□ -0.41
LRP6-204ENST00000540415 APLP2Q06481 763 aa12.47□□□□□ -0.41
LRP6-204ENST00000540415 ORAI2Q96SN7 254 aa12.47□□□□□ -0.41
LRP6-204ENST00000540415 ATRNO75882 1429 aa12.46□□□□□ -0.41
LRP6-204ENST00000540415 TRPC5Q9UL62 973 aaPredicted RBP12.46□□□□□ -0.41
LRP6-204ENST00000540415 FNBP4Q8N3X1 1017 aaPredicted RBP12.45□□□□□ -0.42
LRP6-204ENST00000540415 SOS2Q07890 1332 aaPredicted RBP12.44□□□□□ -0.42
LRP6-204ENST00000540415 ZNF326Q5BKZ1 582 aaKnown RBP12.44□□□□□ -0.42
LRP6-204ENST00000540415 NALCNQ8IZF0 1738 aa12.44□□□□□ -0.42
LRP6-204ENST00000540415 NUP155O75694 1391 aa12.43□□□□□ -0.42
LRP6-204ENST00000540415 BCL9LQ86UU0 1499 aa12.41□□□□□ -0.42
LRP6-204ENST00000540415 IQGAP3Q86VI3 1631 aa12.41□□□□□ -0.42
LRP6-204ENST00000540415 PTCH1Q13635 1447 aa12.41□□□□□ -0.42
LRP6-204ENST00000540415 ROBO2Q9HCK4 1378 aa12.41□□□□□ -0.42
LRP6-204ENST00000540415 DEFB132Q7Z7B7 95 aa12.4□□□□□ -0.42
LRP6-204ENST00000540415 MYOM2P54296 1465 aa12.4□□□□□ -0.43
LRP6-204ENST00000540415 XPCQ01831 940 aaPredicted RBP12.39□□□□□ -0.43
LRP6-204ENST00000540415 LAMC1P11047 1609 aa12.39□□□□□ -0.43
LRP6-204ENST00000540415 GJD4Q96KN9 370 aaPredicted RBP12.38□□□□□ -0.43
LRP6-204ENST00000540415 NEXMIFQ5QGS0 1516 aa12.37□□□□□ -0.43
LRP6-204ENST00000540415 FOXD1Q16676 465 aa12.37□□□□□ -0.43
LRP6-204ENST00000540415 CCDC125Q86Z20 511 aa12.37□□□□□ -0.43
LRP6-204ENST00000540415 COL22A1Q8NFW1 1626 aaPredicted RBP12.36□□□□□ -0.43
LRP6-204ENST00000540415 ROCK1Q13464 1354 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 161.6 ms