RNA–Protein interactions for RNA: ENST00000540159.3

BNIP3-202, Transcript of BCL2 interacting protein 3, humanhuman

TSL 1 (best)

Gene BNIP3, Length 3,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-202ENST00000540159 RGS3P49796 1198 aa17.97■□□□□ 0.47
BNIP3-202ENST00000540159 RRP7AQ9Y3A4 280 aaKnown RBP17.97■□□□□ 0.47
BNIP3-202ENST00000540159 WDR7Q9Y4E6 1490 aa17.97■□□□□ 0.47
BNIP3-202ENST00000540159 DMRT2Q9Y5R5 561 aa17.97■□□□□ 0.47
BNIP3-202ENST00000540159 ATP10AO60312 1499 aa17.96■□□□□ 0.47
BNIP3-202ENST00000540159 BCAR3O75815 825 aa17.95■□□□□ 0.46
BNIP3-202ENST00000540159 DUSP27Q5VZP5 1158 aa17.95■□□□□ 0.46
BNIP3-202ENST00000540159 GOLGA2Q08379 1002 aa17.94■□□□□ 0.46
BNIP3-202ENST00000540159 PLXNC1O60486 1568 aa17.94■□□□□ 0.46
BNIP3-202ENST00000540159 ABCC1P33527 1531 aa17.94■□□□□ 0.46
BNIP3-202ENST00000540159 CARD14Q9BXL6 1004 aa17.94■□□□□ 0.46
BNIP3-202ENST00000540159 WASHC2CQ9Y4E1 1318 aa17.93■□□□□ 0.46
BNIP3-202ENST00000540159 KANK1Q14678 1352 aa17.92■□□□□ 0.46
BNIP3-202ENST00000540159 TCERG1O14776 1098 aaKnown RBP17.92■□□□□ 0.46
BNIP3-202ENST00000540159 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
BNIP3-202ENST00000540159 FANCAO15360 1455 aa17.91■□□□□ 0.46
BNIP3-202ENST00000540159 BACH2Q9BYV9 841 aa17.91■□□□□ 0.46
BNIP3-202ENST00000540159 SLC12A5Q9H2X9 1139 aa17.91■□□□□ 0.46
BNIP3-202ENST00000540159 SHROOM2Q13796 1616 aa17.91■□□□□ 0.46
BNIP3-202ENST00000540159 CDCA8Q53HL2 280 aa17.9■□□□□ 0.46
BNIP3-202ENST00000540159 RTL5Q5HYW3 569 aaPredicted RBP17.9■□□□□ 0.46
BNIP3-202ENST00000540159 EIF2AK4Q9P2K8 1649 aaKnown RBP17.9■□□□□ 0.46
BNIP3-202ENST00000540159 CLTCL1P53675 1640 aa17.89■□□□□ 0.45
BNIP3-202ENST00000540159 SCAF11Q99590 1463 aaKnown RBP17.89■□□□□ 0.45
BNIP3-202ENST00000540159 BCL2L13Q9BXK5 485 aa17.88■□□□□ 0.45
BNIP3-202ENST00000540159 FRAT1Q92837 279 aaPredicted RBP17.87■□□□□ 0.45
BNIP3-202ENST00000540159 MADDQ8WXG6 1647 aa17.87■□□□□ 0.45
BNIP3-202ENST00000540159 ADGRL1O94910 1474 aa17.87■□□□□ 0.45
BNIP3-202ENST00000540159 ZFYVE16Q7Z3T8 1539 aa17.87■□□□□ 0.45
BNIP3-202ENST00000540159 CANXP27824 592 aaKnown RBP17.85■□□□□ 0.45
BNIP3-202ENST00000540159 ZMYM4Q5VZL5 1548 aa17.85■□□□□ 0.45
BNIP3-202ENST00000540159 SLFN5Q08AF3 891 aa17.84■□□□□ 0.45
BNIP3-202ENST00000540159 STK26Q9P289 416 aa17.84■□□□□ 0.45
BNIP3-202ENST00000540159 RAPGEF3O95398 923 aa17.83■□□□□ 0.45
BNIP3-202ENST00000540159 NEFMP07197 916 aa17.83■□□□□ 0.44
BNIP3-202ENST00000540159 MORC1Q86VD1 984 aa17.83■□□□□ 0.44
BNIP3-202ENST00000540159 EIF3AQ14152 1382 aaKnown RBP17.83■□□□□ 0.44
BNIP3-202ENST00000540159 PANK1Q8TE04 598 aa17.83■□□□□ 0.44
BNIP3-202ENST00000540159 NOS1P29475 1434 aa17.82■□□□□ 0.44
BNIP3-202ENST00000540159 ATP7AQ04656 1500 aa17.82■□□□□ 0.44
BNIP3-202ENST00000540159 ASXL1Q8IXJ9 1541 aa17.82■□□□□ 0.44
BNIP3-202ENST00000540159 TRPM2O94759 1503 aa17.82■□□□□ 0.44
BNIP3-202ENST00000540159 COG6Q9Y2V7 657 aa17.81■□□□□ 0.44
BNIP3-202ENST00000540159 SPHKAPQ2M3C7 1700 aa17.81■□□□□ 0.44
BNIP3-202ENST00000540159 CLUAP1Q96AJ1 413 aa17.8■□□□□ 0.44
BNIP3-202ENST00000540159 TNNQ9UQP3 1299 aa17.8■□□□□ 0.44
BNIP3-202ENST00000540159 RNF17Q9BXT8 1623 aaKnown RBP17.8■□□□□ 0.44
BNIP3-202ENST00000540159 CENPJQ9HC77 1338 aaPredicted RBP17.8■□□□□ 0.44
BNIP3-202ENST00000540159 NPM1P06748 294 aaKnown RBP eCLIP17.8■□□□□ 0.44
BNIP3-202ENST00000540159 ZNF521Q96K83 1311 aa17.79■□□□□ 0.44
BNIP3-202ENST00000540159 PTPRTO14522 1441 aa17.79■□□□□ 0.44
BNIP3-202ENST00000540159 LAMC1P11047 1609 aa17.79■□□□□ 0.44
BNIP3-202ENST00000540159 ASXL2Q76L83 1435 aa17.79■□□□□ 0.44
BNIP3-202ENST00000540159 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.78■□□□□ 0.44
BNIP3-202ENST00000540159 ERVK-7P63135 1459 aa17.78■□□□□ 0.44
BNIP3-202ENST00000540159 IQGAP1P46940 1657 aa17.78■□□□□ 0.44
BNIP3-202ENST00000540159 CABP2Q9NPB3 220 aa17.78■□□□□ 0.44
BNIP3-202ENST00000540159 NSD3Q9BZ95 1437 aa17.77■□□□□ 0.43
BNIP3-202ENST00000540159 MTHFSP49914 203 aa17.76■□□□□ 0.43
BNIP3-202ENST00000540159 RTEL1-TNFRSF6BF6WH68 1400 aa17.76■□□□□ 0.43
BNIP3-202ENST00000540159 CLASP1Q7Z460 1538 aa17.76■□□□□ 0.43
BNIP3-202ENST00000540159 IGHDP01880 384 aa17.75■□□□□ 0.43
BNIP3-202ENST00000540159 MS4A1P11836 297 aa17.75■□□□□ 0.43
BNIP3-202ENST00000540159 KDM2BQ8NHM5 1336 aa17.75■□□□□ 0.43
BNIP3-202ENST00000540159 CENPQQ7L2Z9 268 aaPredicted RBP17.74■□□□□ 0.43
BNIP3-202ENST00000540159 WWC1Q8IX03 1113 aa17.74■□□□□ 0.43
BNIP3-202ENST00000540159 CEP152O94986 1710 aa17.74■□□□□ 0.43
BNIP3-202ENST00000540159 UHRF1BP1LA0JNW5 1464 aa17.73■□□□□ 0.43
BNIP3-202ENST00000540159 TCP11L2Q8N4U5 519 aa17.73■□□□□ 0.43
BNIP3-202ENST00000540159 DAXXQ9UER7 740 aaPredicted RBP17.73■□□□□ 0.43
BNIP3-202ENST00000540159 SYNMO15061 1565 aa17.73■□□□□ 0.43
BNIP3-202ENST00000540159 ABCA6Q8N139 1617 aa17.72■□□□□ 0.43
BNIP3-202ENST00000540159 MYOM1P52179 1685 aa17.72■□□□□ 0.43
BNIP3-202ENST00000540159 E9PSI1 815 aa17.72■□□□□ 0.43
BNIP3-202ENST00000540159 U2AF1L5P0DN76 240 aaPredicted RBP17.72■□□□□ 0.43
BNIP3-202ENST00000540159 U2AF1Q01081 240 aaKnown RBP eCLIP17.72■□□□□ 0.43
BNIP3-202ENST00000540159 RTN4Q9NQC3 1192 aaKnown RBP17.71■□□□□ 0.43
BNIP3-202ENST00000540159 PIK3C2GO75747 1445 aa17.71■□□□□ 0.43
BNIP3-202ENST00000540159 TET3O43151 1660 aa17.71■□□□□ 0.43
BNIP3-202ENST00000540159 U2SURPO15042 1029 aaKnown RBP17.71■□□□□ 0.43
BNIP3-202ENST00000540159 KDM5AP29375 1690 aaKnown RBP17.7■□□□□ 0.42
BNIP3-202ENST00000540159 SRPK2P78362 688 aaKnown RBP17.7■□□□□ 0.42
BNIP3-202ENST00000540159 C8orf34Q49A92 452 aa17.7■□□□□ 0.42
BNIP3-202ENST00000540159 GGNBP2Q9H3C7 697 aa17.7■□□□□ 0.42
BNIP3-202ENST00000540159 FBLN1P23142 703 aa17.69■□□□□ 0.42
BNIP3-202ENST00000540159 NKTRP30414 1462 aaKnown RBP17.69■□□□□ 0.42
BNIP3-202ENST00000540159 MROH2AA6NES4 1674 aa17.68■□□□□ 0.42
BNIP3-202ENST00000540159 NPATQ14207 1427 aa17.68■□□□□ 0.42
BNIP3-202ENST00000540159 PPM1GO15355 546 aaPredicted RBP17.68■□□□□ 0.42
BNIP3-202ENST00000540159 FAM161AQ3B820 660 aa17.68■□□□□ 0.42
BNIP3-202ENST00000540159 TSR2Q969E8 191 aaKnown RBP17.68■□□□□ 0.42
BNIP3-202ENST00000540159 MINK1Q8N4C8 1332 aaPredicted RBP17.68■□□□□ 0.42
BNIP3-202ENST00000540159 MAP3K4Q9Y6R4 1608 aa17.67■□□□□ 0.42
BNIP3-202ENST00000540159 RLBP1P12271 317 aa17.67■□□□□ 0.42
BNIP3-202ENST00000540159 STAC3Q96MF2 364 aa17.66■□□□□ 0.42
BNIP3-202ENST00000540159 INO80Q9ULG1 1556 aaPredicted RBP17.66■□□□□ 0.42
BNIP3-202ENST00000540159 TRMT2AQ8IZ69 625 aaKnown RBP17.66■□□□□ 0.42
BNIP3-202ENST00000540159 PPRC1Q5VV67 1664 aaKnown RBP17.66■□□□□ 0.42
BNIP3-202ENST00000540159 MROH1Q8NDA8 1641 aa17.66■□□□□ 0.42
BNIP3-202ENST00000540159 C14orf93Q9H972 538 aaKnown RBP17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms