RNA–Protein interactions for RNA: ENST00000539722.5

PRKCQ-203, Transcript of protein kinase C theta, humanhuman

TSL 2 BASIC

Gene PRKCQ, Length 3,224 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCQ-203ENST00000539722 KNSTRNQ9Y448 316 aa15.42■□□□□ 0.06
PRKCQ-203ENST00000539722 RLBP1P12271 317 aa15.42■□□□□ 0.06
PRKCQ-203ENST00000539722 MSNP26038 577 aaKnown RBP15.42■□□□□ 0.06
PRKCQ-203ENST00000539722 CENPJQ9HC77 1338 aaPredicted RBP15.42■□□□□ 0.06
PRKCQ-203ENST00000539722 TESK2Q96S53 571 aa15.41■□□□□ 0.06
PRKCQ-203ENST00000539722 DNMT1P26358 1616 aaKnown RBP15.41■□□□□ 0.06
PRKCQ-203ENST00000539722 XPCQ01831 940 aaPredicted RBP15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 NKTRP30414 1462 aaKnown RBP15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 FANCD2Q9BXW9 1451 aa15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 CUL7Q14999 1698 aa15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 KIF21AQ7Z4S6 1674 aa15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 NASPP49321 788 aaPredicted RBP15.4■□□□□ 0.06
PRKCQ-203ENST00000539722 ZSCAN30Q86W11 494 aa15.39■□□□□ 0.06
PRKCQ-203ENST00000539722 RRP7AQ9Y3A4 280 aaKnown RBP15.39■□□□□ 0.06
PRKCQ-203ENST00000539722 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
PRKCQ-203ENST00000539722 CC2D2AQ9P2K1 1620 aa15.39■□□□□ 0.05
PRKCQ-203ENST00000539722 OFD1O75665 1012 aa15.38■□□□□ 0.05
PRKCQ-203ENST00000539722 TMF1P82094 1093 aa15.38■□□□□ 0.05
PRKCQ-203ENST00000539722 TRMT2AQ8IZ69 625 aaKnown RBP15.38■□□□□ 0.05
PRKCQ-203ENST00000539722 ANKRD50Q9ULJ7 1429 aa15.37■□□□□ 0.05
PRKCQ-203ENST00000539722 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
PRKCQ-203ENST00000539722 UQCRHLA0A096LP55 91 aa15.37■□□□□ 0.05
PRKCQ-203ENST00000539722 E9PSI1 815 aa15.37■□□□□ 0.05
PRKCQ-203ENST00000539722 UQCRHP07919 91 aa15.37■□□□□ 0.05
PRKCQ-203ENST00000539722 HSP90AB1P08238 724 aaKnown RBP15.36■□□□□ 0.05
PRKCQ-203ENST00000539722 PMFBP1Q8TBY8 1022 aa15.36■□□□□ 0.05
PRKCQ-203ENST00000539722 ANP32BQ92688 251 aaKnown RBP15.36■□□□□ 0.05
PRKCQ-203ENST00000539722 PRDM2Q13029 1718 aa15.35■□□□□ 0.05
PRKCQ-203ENST00000539722 NCLP19338 710 aaKnown RBP15.35■□□□□ 0.05
PRKCQ-203ENST00000539722 CCDC173Q0VFZ6 552 aa15.35■□□□□ 0.05
PRKCQ-203ENST00000539722 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.35■□□□□ 0.05
PRKCQ-203ENST00000539722 TOPBP1Q92547 1522 aa15.35■□□□□ 0.05
PRKCQ-203ENST00000539722 ERBINQ96RT1 1412 aa15.33■□□□□ 0.05
PRKCQ-203ENST00000539722 JARID2Q92833 1246 aaPredicted RBP15.33■□□□□ 0.04
PRKCQ-203ENST00000539722 GBP4Q96PP9 640 aa15.33■□□□□ 0.04
PRKCQ-203ENST00000539722 COL17A1Q9UMD9 1497 aaPredicted RBP15.33■□□□□ 0.04
PRKCQ-203ENST00000539722 INSRP06213 1382 aa15.33■□□□□ 0.04
PRKCQ-203ENST00000539722 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 ANKRD30AQ9BXX3 1397 aa15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 ISY1Q9ULR0 285 aaKnown RBP15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 DDX49Q9Y6V7 483 aaKnown RBP15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 SSFA2P28290 1259 aa15.32■□□□□ 0.04
PRKCQ-203ENST00000539722 RTEL1-TNFRSF6BF6WH68 1400 aa15.31■□□□□ 0.04
PRKCQ-203ENST00000539722 RWDD1Q9H446 243 aaPredicted RBP15.31■□□□□ 0.04
PRKCQ-203ENST00000539722 CD2BP2O95400 341 aaKnown RBP15.31■□□□□ 0.04
PRKCQ-203ENST00000539722 FGD1P98174 961 aa15.31■□□□□ 0.04
PRKCQ-203ENST00000539722 MAGI2Q86UL8 1455 aa15.3■□□□□ 0.04
PRKCQ-203ENST00000539722 PRAG1Q86YV5 1406 aa15.3■□□□□ 0.04
PRKCQ-203ENST00000539722 PRG4Q92954 1404 aaPredicted RBP15.3■□□□□ 0.04
PRKCQ-203ENST00000539722 ARHGEF12Q9NZN5 1544 aa15.3■□□□□ 0.04
PRKCQ-203ENST00000539722 TNNT2P45379 298 aaPredicted RBP15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 RARSP54136 660 aaKnown RBP15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 TSC1Q92574 1164 aa15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 PPP1R9BQ96SB3 815 aa15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 RBM42Q9BTD8 480 aaKnown RBP15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
PRKCQ-203ENST00000539722 WWC1Q8IX03 1113 aa15.28■□□□□ 0.04
PRKCQ-203ENST00000539722 DNMBPQ6XZF7 1577 aa15.28■□□□□ 0.04
PRKCQ-203ENST00000539722 MPNDQ8N594 471 aa15.28■□□□□ 0.04
PRKCQ-203ENST00000539722 RAB3GAP1Q15042 981 aa15.27■□□□□ 0.04
PRKCQ-203ENST00000539722 DDIT3P35638 169 aa15.27■□□□□ 0.03
PRKCQ-203ENST00000539722 CAVIN1Q6NZI2 390 aaKnown RBP15.27■□□□□ 0.03
PRKCQ-203ENST00000539722 WDR62O43379 1518 aa15.26■□□□□ 0.03
PRKCQ-203ENST00000539722 SKOR2Q2VWA4 1001 aaPredicted RBP15.26■□□□□ 0.03
PRKCQ-203ENST00000539722 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.25■□□□□ 0.03
PRKCQ-203ENST00000539722 MAP7D2Q96T17 732 aa15.25■□□□□ 0.03
PRKCQ-203ENST00000539722 CCDC144AA2RUR9 1427 aa15.25■□□□□ 0.03
PRKCQ-203ENST00000539722 FAM177BA6PVY3 158 aa15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 FTSJ3Q8IY81 847 aaKnown RBP15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 SMAP1Q8IYB5 467 aaPredicted RBP15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 LAMC3Q9Y6N6 1575 aa15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 AK9Q5TCS8 1911 aa15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 MCTP1Q6DN14 999 aa15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 RBSNQ9H1K0 784 aa15.24■□□□□ 0.03
PRKCQ-203ENST00000539722 TSPY4P0CV99 314 aa15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 TSPY10P0CW01 314 aa15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 HNRNPMP52272 730 aaKnown RBP eCLIP15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 SMC5Q8IY18 1101 aa15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 LNPKQ9C0E8 428 aa15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 KDM5DQ9BY66 1539 aa15.23■□□□□ 0.03
PRKCQ-203ENST00000539722 GAS2L2Q8NHY3 880 aa15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 CHAMP1Q96JM3 812 aa15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 TRPM1Q7Z4N2 1603 aa15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 CBX1P83916 185 aa15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 RBM27Q9P2N5 1060 aaKnown RBP15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 GOLGA6L22H0YM25 854 aa15.22■□□□□ 0.03
PRKCQ-203ENST00000539722 NOL7Q9UMY1 257 aaKnown RBP15.21■□□□□ 0.03
PRKCQ-203ENST00000539722 RNF214Q8ND24 703 aa15.21■□□□□ 0.03
PRKCQ-203ENST00000539722 PRIM1P49642 420 aaKnown RBP15.21■□□□□ 0.02
PRKCQ-203ENST00000539722 WDR7Q9Y4E6 1490 aa15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 BAG4O95429 457 aaKnown RBP15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 ITPRIPQ8IWB1 547 aa15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 BBXQ8WY36 941 aaPredicted RBP15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 IGSF3O75054 1194 aa15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 MVPQ14764 893 aaKnown RBP15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 DNTTIP2Q5QJE6 756 aaKnown RBP15.2■□□□□ 0.02
PRKCQ-203ENST00000539722 NCOA3Q9Y6Q9 1424 aa15.19■□□□□ 0.02
PRKCQ-203ENST00000539722 ZSCAN23Q3MJ62 389 aa15.19■□□□□ 0.02
PRKCQ-203ENST00000539722 CEP170Q5SW79 1584 aa15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.2 ms