RNA–Protein interactions for RNA: ENST00000539063.5

PHC1-206, Transcript of polyhomeotic homolog 1, humanhuman

TSL 3

Gene PHC1, Length 642 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHC1-206ENST00000539063 LAMC1P11047 1609 aa13.42□□□□□ -0.26
PHC1-206ENST00000539063 HDGFP51858 240 aaKnown RBP13.41□□□□□ -0.26
PHC1-206ENST00000539063 NBPF1Q3BBV0 1214 aa13.41□□□□□ -0.26
PHC1-206ENST00000539063 ADGRF5Q8IZF2 1346 aa13.4□□□□□ -0.26
PHC1-206ENST00000539063 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
PHC1-206ENST00000539063 POLR3GLQ9BT43 218 aa13.39□□□□□ -0.27
PHC1-206ENST00000539063 CCDC7Q96M83 1385 aa13.39□□□□□ -0.27
PHC1-206ENST00000539063 ST20-MTHFSA0A0A6YYL1 179 aa13.38□□□□□ -0.27
PHC1-206ENST00000539063 SCAF11Q99590 1463 aaKnown RBP13.37□□□□□ -0.27
PHC1-206ENST00000539063 NRXN1Q9ULB1 1477 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 KIAA1210Q9ULL0 1709 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 SLC24A1O60721 1099 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 CFAP70Q5T0N1 1121 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 PLPPR3Q6T4P5 718 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 ZFYVE9O95405 1425 aa13.37□□□□□ -0.27
PHC1-206ENST00000539063 IFT172Q9UG01 1749 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 FER1L4A9Z1Z3 1794 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 PPLO60437 1756 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 PIK3C2GO75747 1445 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 WASHC2AQ641Q2 1341 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 NLRP1Q9C000 1473 aa13.36□□□□□ -0.27
PHC1-206ENST00000539063 TMEM131LA2VDJ0 1609 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 NEXMIFQ5QGS0 1516 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 ANP32CO43423 234 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 TMF1P82094 1093 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 NUTM2DQ5VT03 806 aaPredicted RBP13.35□□□□□ -0.27
PHC1-206ENST00000539063 C14orf93Q9H972 538 aaKnown RBP13.35□□□□□ -0.27
PHC1-206ENST00000539063 RIMS2Q9UQ26 1411 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 KIF7Q2M1P5 1343 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 A2ML1A8K2U0 1454 aa13.35□□□□□ -0.27
PHC1-206ENST00000539063 CDCA8Q53HL2 280 aa13.34□□□□□ -0.27
PHC1-206ENST00000539063 CEBPAP49715 358 aaPredicted RBP13.33□□□□□ -0.28
PHC1-206ENST00000539063 MIER1Q8N108 512 aa13.33□□□□□ -0.28
PHC1-206ENST00000539063 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
PHC1-206ENST00000539063 BCANQ96GW7 911 aa13.31□□□□□ -0.28
PHC1-206ENST00000539063 EID1Q9Y6B2 187 aa13.3□□□□□ -0.28
PHC1-206ENST00000539063 C3P01024 1663 aa13.29□□□□□ -0.28
PHC1-206ENST00000539063 IQGAP1P46940 1657 aa13.29□□□□□ -0.28
PHC1-206ENST00000539063 C11orf95C9JLR9 678 aaPredicted RBP13.29□□□□□ -0.28
PHC1-206ENST00000539063 SENP3Q9H4L4 574 aaPredicted RBP13.29□□□□□ -0.28
PHC1-206ENST00000539063 THEMISQ8N1K5 641 aaPredicted RBP13.28□□□□□ -0.28
PHC1-206ENST00000539063 CENPJQ9HC77 1338 aaPredicted RBP13.28□□□□□ -0.28
PHC1-206ENST00000539063 TMEM2Q9UHN6 1383 aa13.28□□□□□ -0.28
PHC1-206ENST00000539063 KDM5AP29375 1690 aaKnown RBP13.28□□□□□ -0.28
PHC1-206ENST00000539063 RIMS1Q86UR5 1692 aaKnown RBP13.28□□□□□ -0.28
PHC1-206ENST00000539063 POLR1AO95602 1720 aaPredicted RBP13.27□□□□□ -0.28
PHC1-206ENST00000539063 TRAK1Q9UPV9 953 aa13.27□□□□□ -0.29
PHC1-206ENST00000539063 TMEM132EQ6IEE7 984 aa13.26□□□□□ -0.29
PHC1-206ENST00000539063 TESK2Q96S53 571 aa13.26□□□□□ -0.29
PHC1-206ENST00000539063 MYO5BQ9ULV0 1848 aa13.26□□□□□ -0.29
PHC1-206ENST00000539063 ADAMTSL3P82987 1691 aa13.24□□□□□ -0.29
PHC1-206ENST00000539063 ADGRB1O14514 1584 aa13.24□□□□□ -0.29
PHC1-206ENST00000539063 POGKQ9P215 609 aa13.24□□□□□ -0.29
PHC1-206ENST00000539063 STK26Q9P289 416 aa13.24□□□□□ -0.29
PHC1-206ENST00000539063 DISP3Q9P2K9 1392 aa13.23□□□□□ -0.29
PHC1-206ENST00000539063 SBNO2Q9Y2G9 1366 aa13.23□□□□□ -0.29
PHC1-206ENST00000539063 UBR1Q8IWV7 1749 aa13.23□□□□□ -0.29
PHC1-206ENST00000539063 TXNDC2Q86VQ3 553 aa13.23□□□□□ -0.29
PHC1-206ENST00000539063 MYO3AQ8NEV4 1616 aa13.22□□□□□ -0.29
PHC1-206ENST00000539063 ALKQ9UM73 1620 aa13.22□□□□□ -0.29
PHC1-206ENST00000539063 YTHDC2Q9H6S0 1430 aaKnown RBP13.22□□□□□ -0.29
PHC1-206ENST00000539063 PLEKHG1Q9ULL1 1385 aa13.21□□□□□ -0.29
PHC1-206ENST00000539063 CCER2I3L3R5 266 aa13.21□□□□□ -0.29
PHC1-206ENST00000539063 CEP170BQ9Y4F5 1589 aaPredicted RBP13.2□□□□□ -0.3
PHC1-206ENST00000539063 LRPPRCP42704 1394 aaKnown RBP13.2□□□□□ -0.3
PHC1-206ENST00000539063 SLIT1O75093 1534 aa13.19□□□□□ -0.3
PHC1-206ENST00000539063 EVC2Q86UK5 1308 aa13.19□□□□□ -0.3
PHC1-206ENST00000539063 ARHGAP23Q9P227 1491 aa13.18□□□□□ -0.3
PHC1-206ENST00000539063 PTPRMP28827 1452 aa13.17□□□□□ -0.3
PHC1-206ENST00000539063 ANKLE2Q86XL3 938 aa13.17□□□□□ -0.3
PHC1-206ENST00000539063 PRAM1Q96QH2 718 aa13.17□□□□□ -0.3
PHC1-206ENST00000539063 ASXL1Q8IXJ9 1541 aa13.17□□□□□ -0.3
PHC1-206ENST00000539063 CENPBP07199 599 aaPredicted RBP13.16□□□□□ -0.3
PHC1-206ENST00000539063 LTKP29376 864 aa13.16□□□□□ -0.3
PHC1-206ENST00000539063 SAFB2Q14151 953 aaKnown RBP eCLIP13.16□□□□□ -0.3
PHC1-206ENST00000539063 PUS7Q96PZ0 661 aaKnown RBP13.16□□□□□ -0.3
PHC1-206ENST00000539063 DLC1Q96QB1 1528 aa13.16□□□□□ -0.3
PHC1-206ENST00000539063 ABCC11Q96J66 1382 aa13.16□□□□□ -0.3
PHC1-206ENST00000539063 QRICH2Q9H0J4 1663 aa13.15□□□□□ -0.3
PHC1-206ENST00000539063 YTHDC1Q96MU7 727 aaKnown RBP13.15□□□□□ -0.3
PHC1-206ENST00000539063 PANK3Q9H999 370 aa13.15□□□□□ -0.3
PHC1-206ENST00000539063 KNSTRNQ9Y448 316 aa13.15□□□□□ -0.3
PHC1-206ENST00000539063 KTN1Q86UP2 1357 aaKnown RBP13.15□□□□□ -0.3
PHC1-206ENST00000539063 PRKRIP1Q9H875 184 aaPredicted RBP13.14□□□□□ -0.31
PHC1-206ENST00000539063 ARHGEF28Q8N1W1 1705 aaKnown RBP13.13□□□□□ -0.31
PHC1-206ENST00000539063 ZNF142P52746 1687 aaPredicted RBP13.13□□□□□ -0.31
PHC1-206ENST00000539063 DIP2AQ14689 1571 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 METP08581 1390 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 SRPK2P78362 688 aaKnown RBP13.13□□□□□ -0.31
PHC1-206ENST00000539063 CNGB1Q14028 1251 aaPredicted RBP13.13□□□□□ -0.31
PHC1-206ENST00000539063 RALBP1Q15311 655 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 TMC1Q8TDI8 760 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 SIRT1Q96EB6 747 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 TBX22Q9Y458 520 aa13.13□□□□□ -0.31
PHC1-206ENST00000539063 MINK1Q8N4C8 1332 aaPredicted RBP13.13□□□□□ -0.31
PHC1-206ENST00000539063 ADAMTS13Q76LX8 1427 aa13.12□□□□□ -0.31
PHC1-206ENST00000539063 ATAD2Q6PL18 1390 aa13.11□□□□□ -0.31
PHC1-206ENST00000539063 SETD1BQ9UPS6 1966 aaKnown RBP13.11□□□□□ -0.31
PHC1-206ENST00000539063 NRXN3Q9Y4C0 1643 aa13.11□□□□□ -0.31
PHC1-206ENST00000539063 SLC26A8Q96RN1 970 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 119.6 ms