RNA–Protein interactions for RNA: ENST00000538987.1

LPCAT3-208, Transcript of lysophosphatidylcholine acyltransferase 3, humanhuman

TSL 3

Gene LPCAT3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT3-208ENST00000538987 ADGRB3O60242 1522 aa12.33□□□□□ -0.44
LPCAT3-208ENST00000538987 KIF1BO60333 1816 aa12.33□□□□□ -0.44
LPCAT3-208ENST00000538987 SPATA31E1Q6ZUB1 1445 aa12.33□□□□□ -0.44
LPCAT3-208ENST00000538987 TMEM2Q9UHN6 1383 aa12.32□□□□□ -0.44
LPCAT3-208ENST00000538987 RIMS2Q9UQ26 1411 aa12.32□□□□□ -0.44
LPCAT3-208ENST00000538987 ZEB1P37275 1124 aaPredicted RBP12.32□□□□□ -0.44
LPCAT3-208ENST00000538987 STAC3Q96MF2 364 aa12.32□□□□□ -0.44
LPCAT3-208ENST00000538987 TMEM131LA2VDJ0 1609 aa12.32□□□□□ -0.44
LPCAT3-208ENST00000538987 LTKP29376 864 aa12.31□□□□□ -0.44
LPCAT3-208ENST00000538987 NCKAP5LQ9HCH0 1330 aa12.31□□□□□ -0.44
LPCAT3-208ENST00000538987 UBR1Q8IWV7 1749 aa12.29□□□□□ -0.44
LPCAT3-208ENST00000538987 ADGRF5Q8IZF2 1346 aa12.29□□□□□ -0.44
LPCAT3-208ENST00000538987 LMTK3Q96Q04 1460 aa12.28□□□□□ -0.44
LPCAT3-208ENST00000538987 NEURL4Q96JN8 1562 aa12.26□□□□□ -0.45
LPCAT3-208ENST00000538987 ZNF142P52746 1687 aaPredicted RBP12.26□□□□□ -0.45
LPCAT3-208ENST00000538987 SLC26A8Q96RN1 970 aa12.26□□□□□ -0.45
LPCAT3-208ENST00000538987 ZFYVE9O95405 1425 aa12.26□□□□□ -0.45
LPCAT3-208ENST00000538987 KDM5AP29375 1690 aaKnown RBP12.26□□□□□ -0.45
LPCAT3-208ENST00000538987 CFAP70Q5T0N1 1121 aa12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 SCAF11Q99590 1463 aaKnown RBP12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 ARHGAP23Q9P227 1491 aa12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 SLIT1O75093 1534 aa12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 NEXMIFQ5QGS0 1516 aa12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 MYO5BQ9ULV0 1848 aa12.25□□□□□ -0.45
LPCAT3-208ENST00000538987 NBPF8Q3BBV2 869 aa12.24□□□□□ -0.45
LPCAT3-208ENST00000538987 DMRT2Q9Y5R5 561 aa12.24□□□□□ -0.45
LPCAT3-208ENST00000538987 PLEKHG1Q9ULL1 1385 aa12.23□□□□□ -0.45
LPCAT3-208ENST00000538987 MYOM2P54296 1465 aa12.22□□□□□ -0.45
LPCAT3-208ENST00000538987 NPHP4O75161 1426 aaPredicted RBP12.22□□□□□ -0.45
LPCAT3-208ENST00000538987 TMEM132EQ6IEE7 984 aa12.22□□□□□ -0.45
LPCAT3-208ENST00000538987 C14orf93Q9H972 538 aaKnown RBP12.22□□□□□ -0.45
LPCAT3-208ENST00000538987 PRAG1Q86YV5 1406 aa12.21□□□□□ -0.45
LPCAT3-208ENST00000538987 TBX22Q9Y458 520 aa12.21□□□□□ -0.45
LPCAT3-208ENST00000538987 PPLO60437 1756 aa12.2□□□□□ -0.46
LPCAT3-208ENST00000538987 NBPF1Q3BBV0 1214 aa12.2□□□□□ -0.46
LPCAT3-208ENST00000538987 CARD11Q9BXL7 1154 aa12.2□□□□□ -0.46
LPCAT3-208ENST00000538987 STK26Q9P289 416 aa12.2□□□□□ -0.46
LPCAT3-208ENST00000538987 PIK3C2GO75747 1445 aa12.2□□□□□ -0.46
LPCAT3-208ENST00000538987 ROCK2O75116 1388 aaKnown RBP12.19□□□□□ -0.46
LPCAT3-208ENST00000538987 IFT172Q9UG01 1749 aa12.17□□□□□ -0.46
LPCAT3-208ENST00000538987 MED14O60244 1454 aa12.17□□□□□ -0.46
LPCAT3-208ENST00000538987 NRXN1Q9ULB1 1477 aa12.17□□□□□ -0.46
LPCAT3-208ENST00000538987 TRAK1Q9UPV9 953 aa12.17□□□□□ -0.46
LPCAT3-208ENST00000538987 AMOTL2Q9Y2J4 779 aa12.16□□□□□ -0.46
LPCAT3-208ENST00000538987 METP08581 1390 aa12.16□□□□□ -0.46
LPCAT3-208ENST00000538987 ALKQ9UM73 1620 aa12.15□□□□□ -0.46
LPCAT3-208ENST00000538987 ADAMTS13Q76LX8 1427 aa12.15□□□□□ -0.46
LPCAT3-208ENST00000538987 POLR1AO95602 1720 aaPredicted RBP12.14□□□□□ -0.47
LPCAT3-208ENST00000538987 SETBP1Q9Y6X0 1596 aa12.14□□□□□ -0.47
LPCAT3-208ENST00000538987 POGKQ9P215 609 aa12.14□□□□□ -0.47
LPCAT3-208ENST00000538987 IQGAP1P46940 1657 aa12.13□□□□□ -0.47
LPCAT3-208ENST00000538987 KCNA6P17658 529 aa12.13□□□□□ -0.47
LPCAT3-208ENST00000538987 EIF4G2P78344 907 aaKnown RBP eCLIP12.12□□□□□ -0.47
LPCAT3-208ENST00000538987 RALGAPBQ86X10 1494 aa12.12□□□□□ -0.47
LPCAT3-208ENST00000538987 STRCQ7RTU9 1775 aa12.12□□□□□ -0.47
LPCAT3-208ENST00000538987 YTHDC2Q9H6S0 1430 aaKnown RBP12.11□□□□□ -0.47
LPCAT3-208ENST00000538987 PIK3R4Q99570 1358 aa12.11□□□□□ -0.47
LPCAT3-208ENST00000538987 SAFB2Q14151 953 aaKnown RBP eCLIP12.11□□□□□ -0.47
LPCAT3-208ENST00000538987 PROSER2Q86WR7 435 aaPredicted RBP12.11□□□□□ -0.47
LPCAT3-208ENST00000538987 DIP2AQ14689 1571 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 LRPPRCP42704 1394 aaKnown RBP12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 WAPLQ7Z5K2 1190 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 C14orf37Q86TY3 774 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 PRAM1Q96QH2 718 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 LAMC1P11047 1609 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 TRPM1Q7Z4N2 1603 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 NRXN3Q9Y4C0 1643 aa12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 ZNF335Q9H4Z2 1342 aaPredicted RBP12.1□□□□□ -0.47
LPCAT3-208ENST00000538987 EIF3AQ14152 1382 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-208ENST00000538987 RBM33Q96EV2 1170 aaKnown RBP12.09□□□□□ -0.47
LPCAT3-208ENST00000538987 HIRIP3Q9BW71 556 aaPredicted RBP12.09□□□□□ -0.47
LPCAT3-208ENST00000538987 GPRASP1Q5JY77 1395 aa12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 ABCC11Q96J66 1382 aa12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 ST20-MTHFSA0A0A6YYL1 179 aa12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 HSPA5P11021 654 aaKnown RBP12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 PTPRUQ92729 1446 aa12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 KIAA1210Q9ULL0 1709 aa12.08□□□□□ -0.48
LPCAT3-208ENST00000538987 USP47Q96K76 1375 aa12.07□□□□□ -0.48
LPCAT3-208ENST00000538987 ADGRB1O14514 1584 aa12.07□□□□□ -0.48
LPCAT3-208ENST00000538987 SIRT1Q96EB6 747 aa12.07□□□□□ -0.48
LPCAT3-208ENST00000538987 CENPJQ9HC77 1338 aaPredicted RBP12.07□□□□□ -0.48
LPCAT3-208ENST00000538987 ASXL1Q8IXJ9 1541 aa12.06□□□□□ -0.48
LPCAT3-208ENST00000538987 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
LPCAT3-208ENST00000538987 MINK1Q8N4C8 1332 aaPredicted RBP12.05□□□□□ -0.48
LPCAT3-208ENST00000538987 PLEKHH1Q9ULM0 1364 aa12.04□□□□□ -0.48
LPCAT3-208ENST00000538987 SETD1AO15047 1707 aaKnown RBP12.03□□□□□ -0.48
LPCAT3-208ENST00000538987 SLC24A1O60721 1099 aa12.03□□□□□ -0.48
LPCAT3-208ENST00000538987 POLR3GLQ9BT43 218 aa12.03□□□□□ -0.48
LPCAT3-208ENST00000538987 FAM135BQ49AJ0 1406 aa12.03□□□□□ -0.48
LPCAT3-208ENST00000538987 TMF1P82094 1093 aa12.02□□□□□ -0.49
LPCAT3-208ENST00000538987 TMEM94Q12767 1356 aa12.02□□□□□ -0.49
LPCAT3-208ENST00000538987 TECPR2O15040 1411 aa12.02□□□□□ -0.49
LPCAT3-208ENST00000538987 SRPK2P78362 688 aaKnown RBP12.01□□□□□ -0.49
LPCAT3-208ENST00000538987 CHD2O14647 1828 aaKnown RBP12.01□□□□□ -0.49
LPCAT3-208ENST00000538987 PTCH1Q13635 1447 aa12.01□□□□□ -0.49
LPCAT3-208ENST00000538987 DLC1Q96QB1 1528 aa12.01□□□□□ -0.49
LPCAT3-208ENST00000538987 ATF3P18847 181 aa12□□□□□ -0.49
LPCAT3-208ENST00000538987 CDK19Q9BWU1 502 aa12□□□□□ -0.49
LPCAT3-208ENST00000538987 C19orf44Q9H6X5 657 aa12□□□□□ -0.49
LPCAT3-208ENST00000538987 EVC2Q86UK5 1308 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms