RNA–Protein interactions for RNA: ENST00000538786.1

ATL3-203, Transcript of atlastin GTPase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene ATL3, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-203ENST00000538786 ADGRF5Q8IZF2 1346 aa20.34■□□□□ 0.85
ATL3-203ENST00000538786 DISP3Q9P2K9 1392 aa20.34■□□□□ 0.85
ATL3-203ENST00000538786 RPGRIP1LQ68CZ1 1315 aa20.34■□□□□ 0.85
ATL3-203ENST00000538786 SIGLEC1Q9BZZ2 1709 aa20.34■□□□□ 0.85
ATL3-203ENST00000538786 PIK3C2BO00750 1634 aa20.33■□□□□ 0.85
ATL3-203ENST00000538786 CHGAP10645 457 aaKnown RBP20.33■□□□□ 0.84
ATL3-203ENST00000538786 SYNMO15061 1565 aa20.33■□□□□ 0.84
ATL3-203ENST00000538786 EIF3AQ14152 1382 aaKnown RBP20.32■□□□□ 0.84
ATL3-203ENST00000538786 CCDC184Q52MB2 194 aa20.31■□□□□ 0.84
ATL3-203ENST00000538786 PPP6R1Q9UPN7 881 aa20.31■□□□□ 0.84
ATL3-203ENST00000538786 MRS2Q9HD23 443 aa20.31■□□□□ 0.84
ATL3-203ENST00000538786 CFAP70Q5T0N1 1121 aa20.3■□□□□ 0.84
ATL3-203ENST00000538786 SLC52A1Q9NWF4 448 aa20.29■□□□□ 0.84
ATL3-203ENST00000538786 KTN1Q86UP2 1357 aaKnown RBP20.29■□□□□ 0.84
ATL3-203ENST00000538786 PPLO60437 1756 aa20.27■□□□□ 0.84
ATL3-203ENST00000538786 PIK3C2GO75747 1445 aa20.27■□□□□ 0.84
ATL3-203ENST00000538786 CFAP65Q6ZU64 1925 aaKnown RBP20.26■□□□□ 0.83
ATL3-203ENST00000538786 ARHGEF40Q8TER5 1519 aa20.26■□□□□ 0.83
ATL3-203ENST00000538786 SETBP1Q9Y6X0 1596 aa20.25■□□□□ 0.83
ATL3-203ENST00000538786 CDCA8Q53HL2 280 aa20.25■□□□□ 0.83
ATL3-203ENST00000538786 SLC24A1O60721 1099 aa20.24■□□□□ 0.83
ATL3-203ENST00000538786 IDI1Q13907 227 aa20.24■□□□□ 0.83
ATL3-203ENST00000538786 PREX1Q8TCU6 1659 aa20.24■□□□□ 0.83
ATL3-203ENST00000538786 RALBP1Q15311 655 aa20.23■□□□□ 0.83
ATL3-203ENST00000538786 PER1O15534 1290 aaPredicted RBP20.23■□□□□ 0.83
ATL3-203ENST00000538786 HNRNPUQ00839 825 aaKnown RBP eCLIP20.23■□□□□ 0.83
ATL3-203ENST00000538786 C14orf93Q9H972 538 aaKnown RBP20.23■□□□□ 0.83
ATL3-203ENST00000538786 VGFO15240 615 aaPredicted RBP20.21■□□□□ 0.83
ATL3-203ENST00000538786 NEXMIFQ5QGS0 1516 aa20.21■□□□□ 0.83
ATL3-203ENST00000538786 ERVK-7P63135 1459 aa20.2■□□□□ 0.82
ATL3-203ENST00000538786 CNGB1Q14028 1251 aaPredicted RBP20.2■□□□□ 0.82
ATL3-203ENST00000538786 FAM9BQ8IZU0 186 aa20.2■□□□□ 0.82
ATL3-203ENST00000538786 PANK3Q9H999 370 aa20.19■□□□□ 0.82
ATL3-203ENST00000538786 MYBBP1AQ9BQG0 1328 aaKnown RBP20.18■□□□□ 0.82
ATL3-203ENST00000538786 ZFYVE9O95405 1425 aa20.18■□□□□ 0.82
ATL3-203ENST00000538786 ADGRB1O14514 1584 aa20.18■□□□□ 0.82
ATL3-203ENST00000538786 FBXO31Q5XUX0 539 aaPredicted RBP20.17■□□□□ 0.82
ATL3-203ENST00000538786 PARD3Q8TEW0 1356 aa20.17■□□□□ 0.82
ATL3-203ENST00000538786 SBNO2Q9Y2G9 1366 aa20.17■□□□□ 0.82
ATL3-203ENST00000538786 MYO3AQ8NEV4 1616 aa20.17■□□□□ 0.82
ATL3-203ENST00000538786 TMEM131LA2VDJ0 1609 aa20.16■□□□□ 0.82
ATL3-203ENST00000538786 BRD4O60885 1362 aaPredicted RBP20.16■□□□□ 0.82
ATL3-203ENST00000538786 CLTCQ00610 1675 aaKnown RBP20.15■□□□□ 0.82
ATL3-203ENST00000538786 TRHP20396 242 aaPredicted RBP20.14■□□□□ 0.81
ATL3-203ENST00000538786 TMC1Q8TDI8 760 aa20.14■□□□□ 0.81
ATL3-203ENST00000538786 CENPJQ9HC77 1338 aaPredicted RBP20.13■□□□□ 0.81
ATL3-203ENST00000538786 SPATA31D1Q6ZQQ2 1576 aa20.12■□□□□ 0.81
ATL3-203ENST00000538786 MLECQ14165 292 aa20.12■□□□□ 0.81
ATL3-203ENST00000538786 NUTM2DQ5VT03 806 aaPredicted RBP20.11■□□□□ 0.81
ATL3-203ENST00000538786 PNISRQ8TF01 805 aaKnown RBP20.11■□□□□ 0.81
ATL3-203ENST00000538786 KDM5AP29375 1690 aaKnown RBP20.11■□□□□ 0.81
ATL3-203ENST00000538786 TRAK1Q9UPV9 953 aa20.1■□□□□ 0.81
ATL3-203ENST00000538786 TMEM132EQ6IEE7 984 aa20.1■□□□□ 0.81
ATL3-203ENST00000538786 NLRP13Q86W25 1043 aa20.1■□□□□ 0.81
ATL3-203ENST00000538786 ZBED9Q6R2W3 1325 aa20.09■□□□□ 0.81
ATL3-203ENST00000538786 ESF1Q9H501 851 aaKnown RBP20.08■□□□□ 0.81
ATL3-203ENST00000538786 MYOM1P52179 1685 aa20.08■□□□□ 0.8
ATL3-203ENST00000538786 CC2D1BQ5T0F9 858 aaKnown RBP20.07■□□□□ 0.8
ATL3-203ENST00000538786 KNSTRNQ9Y448 316 aa20.07■□□□□ 0.8
ATL3-203ENST00000538786 STAG3Q9UJ98 1225 aa20.06■□□□□ 0.8
ATL3-203ENST00000538786 MYO5BQ9ULV0 1848 aa20.06■□□□□ 0.8
ATL3-203ENST00000538786 ZMYM3Q14202 1370 aa20.05■□□□□ 0.8
ATL3-203ENST00000538786 SUPT16HQ9Y5B9 1047 aaKnown RBP20.05■□□□□ 0.8
ATL3-203ENST00000538786 LRPPRCP42704 1394 aaKnown RBP20.05■□□□□ 0.8
ATL3-203ENST00000538786 A2ML1A8K2U0 1454 aa20.04■□□□□ 0.8
ATL3-203ENST00000538786 QRICH2Q9H0J4 1663 aa20.04■□□□□ 0.8
ATL3-203ENST00000538786 AMER1Q5JTC6 1135 aaPredicted RBP20.03■□□□□ 0.8
ATL3-203ENST00000538786 NPC1L1Q9UHC9 1359 aa20.03■□□□□ 0.8
ATL3-203ENST00000538786 ASXL1Q8IXJ9 1541 aa20.02■□□□□ 0.8
ATL3-203ENST00000538786 ARHGEF28Q8N1W1 1705 aaKnown RBP19.99■□□□□ 0.79
ATL3-203ENST00000538786 PUS7Q96PZ0 661 aaKnown RBP19.99■□□□□ 0.79
ATL3-203ENST00000538786 RIMS2Q9UQ26 1411 aa19.97■□□□□ 0.79
ATL3-203ENST00000538786 ALKQ9UM73 1620 aa19.97■□□□□ 0.79
ATL3-203ENST00000538786 NEFLP07196 543 aa19.96■□□□□ 0.79
ATL3-203ENST00000538786 EVC2Q86UK5 1308 aa19.96■□□□□ 0.79
ATL3-203ENST00000538786 TNRQ92752 1358 aa19.95■□□□□ 0.78
ATL3-203ENST00000538786 YTHDC2Q9H6S0 1430 aaKnown RBP19.95■□□□□ 0.78
ATL3-203ENST00000538786 CARD14Q9BXL6 1004 aa19.94■□□□□ 0.78
ATL3-203ENST00000538786 INSRP06213 1382 aa19.94■□□□□ 0.78
ATL3-203ENST00000538786 PTPRMP28827 1452 aa19.94■□□□□ 0.78
ATL3-203ENST00000538786 PPP2R1AP30153 589 aa19.93■□□□□ 0.78
ATL3-203ENST00000538786 FKBP8Q14318 412 aa19.93■□□□□ 0.78
ATL3-203ENST00000538786 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.93■□□□□ 0.78
ATL3-203ENST00000538786 TULP4Q9NRJ4 1543 aa19.93■□□□□ 0.78
ATL3-203ENST00000538786 STK26Q9P289 416 aa19.93■□□□□ 0.78
ATL3-203ENST00000538786 SENP3Q9H4L4 574 aaPredicted RBP19.91■□□□□ 0.78
ATL3-203ENST00000538786 SLC12A5Q9H2X9 1139 aa19.89■□□□□ 0.77
ATL3-203ENST00000538786 HDGFP51858 240 aaKnown RBP19.88■□□□□ 0.77
ATL3-203ENST00000538786 SMG6Q86US8 1419 aaKnown RBP19.88■□□□□ 0.77
ATL3-203ENST00000538786 PRAM1Q96QH2 718 aa19.88■□□□□ 0.77
ATL3-203ENST00000538786 POGKQ9P215 609 aa19.87■□□□□ 0.77
ATL3-203ENST00000538786 SAFB2Q14151 953 aaKnown RBP eCLIP19.86■□□□□ 0.77
ATL3-203ENST00000538786 DLC1Q96QB1 1528 aa19.86■□□□□ 0.77
ATL3-203ENST00000538786 BLMP54132 1417 aaPredicted RBP19.86■□□□□ 0.77
ATL3-203ENST00000538786 NSD3Q9BZ95 1437 aa19.86■□□□□ 0.77
ATL3-203ENST00000538786 NINLQ9Y2I6 1382 aa19.86■□□□□ 0.77
ATL3-203ENST00000538786 NLRP1Q9C000 1473 aa19.84■□□□□ 0.77
ATL3-203ENST00000538786 CABP2Q9NPB3 220 aa19.84■□□□□ 0.77
ATL3-203ENST00000538786 SETD1AO15047 1707 aaKnown RBP19.84■□□□□ 0.77
ATL3-203ENST00000538786 ANKRD36BQ8N2N9 1353 aa19.84■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms