RNA–Protein interactions for RNA: ENST00000538653.1

BCAR3-209, Transcript of BCAR3, NSP family adaptor protein, humanhuman

TSL 2

Gene BCAR3, Length 900 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BCAR3-209ENST00000538653 HOXB1P14653 301 aaPredicted RBP9.87□□□□□ -0.83
BCAR3-209ENST00000538653 EFCAB3Q8N7B9 438 aa9.87□□□□□ -0.83
BCAR3-209ENST00000538653 ZNF777Q9ULD5 760 aaPredicted RBP9.87□□□□□ -0.83
BCAR3-209ENST00000538653 ARHGEF12Q9NZN5 1544 aa9.87□□□□□ -0.83
BCAR3-209ENST00000538653 TCOF1Q13428 1488 aaKnown RBP9.86□□□□□ -0.83
BCAR3-209ENST00000538653 PTPN23Q9H3S7 1636 aa9.86□□□□□ -0.83
BCAR3-209ENST00000538653 RAPGEF3O95398 923 aa9.86□□□□□ -0.83
BCAR3-209ENST00000538653 ARHGEF5Q12774 1597 aa9.86□□□□□ -0.83
BCAR3-209ENST00000538653 ARHGEF40Q8TER5 1519 aa9.86□□□□□ -0.83
BCAR3-209ENST00000538653 CCDC141Q6ZP82 1450 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 MBD5Q9P267 1494 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 HECW2Q9P2P5 1572 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 TRAPPC8Q9Y2L5 1435 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 RIMBP2O15034 1052 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 RSPH4AQ5TD94 716 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 MLH3Q9UHC1 1453 aa9.85□□□□□ -0.83
BCAR3-209ENST00000538653 ZNF644Q9H582 1327 aaPredicted RBP9.83□□□□□ -0.84
BCAR3-209ENST00000538653 ZFYVE16Q7Z3T8 1539 aa9.83□□□□□ -0.84
BCAR3-209ENST00000538653 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP9.83□□□□□ -0.84
BCAR3-209ENST00000538653 INO80Q9ULG1 1556 aaPredicted RBP9.83□□□□□ -0.84
BCAR3-209ENST00000538653 ERBB3P21860 1342 aa9.82□□□□□ -0.84
BCAR3-209ENST00000538653 HNRNPMP52272 730 aaKnown RBP eCLIP9.82□□□□□ -0.84
BCAR3-209ENST00000538653 SHANK2Q9UPX8 1470 aa9.82□□□□□ -0.84
BCAR3-209ENST00000538653 DNMT1P26358 1616 aaKnown RBP9.82□□□□□ -0.84
BCAR3-209ENST00000538653 ATP7AQ04656 1500 aa9.82□□□□□ -0.84
BCAR3-209ENST00000538653 RTEL1-TNFRSF6BF6WH68 1400 aa9.82□□□□□ -0.84
BCAR3-209ENST00000538653 RRBP1Q9P2E9 1410 aaKnown RBP9.82□□□□□ -0.84
BCAR3-209ENST00000538653 MAST1Q9Y2H9 1570 aa9.81□□□□□ -0.84
BCAR3-209ENST00000538653 MICALL2Q8IY33 904 aa9.81□□□□□ -0.84
BCAR3-209ENST00000538653 AFAP1Q8N556 730 aa9.81□□□□□ -0.84
BCAR3-209ENST00000538653 SPAG9O60271 1321 aaKnown RBP9.81□□□□□ -0.84
BCAR3-209ENST00000538653 CROCC2H7BZ55 1655 aa9.8□□□□□ -0.84
BCAR3-209ENST00000538653 REREQ9P2R6 1566 aa9.8□□□□□ -0.84
BCAR3-209ENST00000538653 PPARGC1BQ86YN6 1023 aaKnown RBP9.8□□□□□ -0.84
BCAR3-209ENST00000538653 KIDINS220Q9ULH0 1771 aa9.8□□□□□ -0.84
BCAR3-209ENST00000538653 DIP2CQ9Y2E4 1556 aa9.8□□□□□ -0.84
BCAR3-209ENST00000538653 ABCA6Q8N139 1617 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 TSPY4P0CV99 314 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 TSPY10P0CW01 314 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 DAPK1P53355 1430 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 C9orf84Q5VXU9 1444 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 YEATS2Q9ULM3 1422 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 ATP10AO60312 1499 aa9.79□□□□□ -0.84
BCAR3-209ENST00000538653 RIOK3O14730 519 aaKnown RBP9.78□□□□□ -0.84
BCAR3-209ENST00000538653 FAM50AQ14320 339 aaKnown RBP9.78□□□□□ -0.84
BCAR3-209ENST00000538653 ABCC5O15440 1437 aa9.78□□□□□ -0.84
BCAR3-209ENST00000538653 PLXNC1O60486 1568 aa9.77□□□□□ -0.85
BCAR3-209ENST00000538653 SOX12O15370 315 aa9.77□□□□□ -0.85
BCAR3-209ENST00000538653 MYT1LQ9UL68 1186 aa9.77□□□□□ -0.85
BCAR3-209ENST00000538653 ADGBQ8N7X0 1667 aa9.77□□□□□ -0.85
BCAR3-209ENST00000538653 VARS2Q5ST30 1063 aaKnown RBP9.76□□□□□ -0.85
BCAR3-209ENST00000538653 ZSWIM6Q9HCJ5 1215 aa9.76□□□□□ -0.85
BCAR3-209ENST00000538653 ADGRL2O95490 1459 aa9.76□□□□□ -0.85
BCAR3-209ENST00000538653 TMEM92Q6UXU6 159 aa9.75□□□□□ -0.85
BCAR3-209ENST00000538653 AGLP35573 1532 aa9.75□□□□□ -0.85
BCAR3-209ENST00000538653 A2MP01023 1474 aa9.74□□□□□ -0.85
BCAR3-209ENST00000538653 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.74□□□□□ -0.85
BCAR3-209ENST00000538653 VGFO15240 615 aaPredicted RBP9.74□□□□□ -0.85
BCAR3-209ENST00000538653 RNF25Q96BH1 459 aaPredicted RBP9.74□□□□□ -0.85
BCAR3-209ENST00000538653 ZFP91Q96JP5 570 aaPredicted RBP9.74□□□□□ -0.85
BCAR3-209ENST00000538653 DUOX2Q9NRD8 1548 aa9.73□□□□□ -0.85
BCAR3-209ENST00000538653 MS4A4AQ96JQ5 239 aa9.73□□□□□ -0.85
BCAR3-209ENST00000538653 ROCK1Q13464 1354 aa9.73□□□□□ -0.85
BCAR3-209ENST00000538653 DHX29Q7Z478 1369 aaKnown RBP9.73□□□□□ -0.85
BCAR3-209ENST00000538653 ANKRD30AQ9BXX3 1397 aa9.73□□□□□ -0.85
BCAR3-209ENST00000538653 RNF166Q96A37 237 aaPredicted RBP9.72□□□□□ -0.85
BCAR3-209ENST00000538653 PHF8Q9UPP1 1060 aa9.72□□□□□ -0.85
BCAR3-209ENST00000538653 KIF15Q9NS87 1388 aa9.72□□□□□ -0.85
BCAR3-209ENST00000538653 NCOA1Q15788 1441 aa9.72□□□□□ -0.85
BCAR3-209ENST00000538653 ERBINQ96RT1 1412 aa9.72□□□□□ -0.85
BCAR3-209ENST00000538653 EIF2AK4Q9P2K8 1649 aaKnown RBP9.71□□□□□ -0.85
BCAR3-209ENST00000538653 BCORL1Q5H9F3 1711 aa9.71□□□□□ -0.85
BCAR3-209ENST00000538653 SIGLEC1Q9BZZ2 1709 aa9.7□□□□□ -0.86
BCAR3-209ENST00000538653 ARID4BQ4LE39 1312 aaPredicted RBP9.7□□□□□ -0.86
BCAR3-209ENST00000538653 PTPRKQ15262 1439 aa9.7□□□□□ -0.86
BCAR3-209ENST00000538653 GPR153Q6NV75 609 aa9.69□□□□□ -0.86
BCAR3-209ENST00000538653 FAM135AQ9P2D6 1515 aa9.69□□□□□ -0.86
BCAR3-209ENST00000538653 RNF17Q9BXT8 1623 aaKnown RBP9.68□□□□□ -0.86
BCAR3-209ENST00000538653 ZNF687Q8N1G0 1237 aa9.68□□□□□ -0.86
BCAR3-209ENST00000538653 CHIC2Q9UKJ5 165 aa9.68□□□□□ -0.86
BCAR3-209ENST00000538653 ADAMTSL3P82987 1691 aa9.67□□□□□ -0.86
BCAR3-209ENST00000538653 ITGAEP38570 1179 aa9.67□□□□□ -0.86
BCAR3-209ENST00000538653 RRP7BPQ9NSQ0 103 aa9.67□□□□□ -0.86
BCAR3-209ENST00000538653 ANKRD50Q9ULJ7 1429 aa9.66□□□□□ -0.86
BCAR3-209ENST00000538653 HFM1A2PYH4 1435 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 CNTLNQ9NXG0 1405 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 FER1L4A9Z1Z3 1794 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 GCC2Q8IWJ2 1684 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 DEPDC5O75140 1603 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 MADDQ8WXG6 1647 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 NLRP6P59044 892 aa9.65□□□□□ -0.86
BCAR3-209ENST00000538653 PRDM15P57071 1507 aaPredicted RBP9.65□□□□□ -0.86
BCAR3-209ENST00000538653 KIF3BO15066 747 aa9.64□□□□□ -0.87
BCAR3-209ENST00000538653 TAOK2Q9UL54 1235 aa9.64□□□□□ -0.87
BCAR3-209ENST00000538653 KDM5DQ9BY66 1539 aa9.64□□□□□ -0.87
BCAR3-209ENST00000538653 MROH2AA6NES4 1674 aa9.64□□□□□ -0.87
BCAR3-209ENST00000538653 ZC3H13Q5T200 1668 aaKnown RBP9.64□□□□□ -0.87
BCAR3-209ENST00000538653 NAIPQ13075 1403 aa9.64□□□□□ -0.87
BCAR3-209ENST00000538653 KDM4FA0A1W2PPD8 638 aa9.63□□□□□ -0.87
BCAR3-209ENST00000538653 PTGER2P43116 358 aa9.63□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 40.3 ms