RNA–Protein interactions for RNA: ENST00000538363.1

TNFRSF1A-211, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 2

Gene TNFRSF1A, Length 554 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-211ENST00000538363 PLA2R1Q13018 1463 aa15.18■□□□□ 0.02
TNFRSF1A-211ENST00000538363 TNRQ92752 1358 aa15.16■□□□□ 0.02
TNFRSF1A-211ENST00000538363 IDI1Q13907 227 aa15.16■□□□□ 0.02
TNFRSF1A-211ENST00000538363 CEP170BQ9Y4F5 1589 aaPredicted RBP15.15■□□□□ 0.02
TNFRSF1A-211ENST00000538363 HDGFP51858 240 aaKnown RBP15.14■□□□□ 0.01
TNFRSF1A-211ENST00000538363 NOS1P29475 1434 aa15.14■□□□□ 0.01
TNFRSF1A-211ENST00000538363 UBR1Q8IWV7 1749 aa15.13■□□□□ 0.01
TNFRSF1A-211ENST00000538363 STAC3Q96MF2 364 aa15.13■□□□□ 0.01
TNFRSF1A-211ENST00000538363 BCANQ96GW7 911 aa15.12■□□□□ 0.01
TNFRSF1A-211ENST00000538363 ADGRB3O60242 1522 aa15.12■□□□□ 0.01
TNFRSF1A-211ENST00000538363 RPGRIP1LQ68CZ1 1315 aa15.11■□□□□ 0.01
TNFRSF1A-211ENST00000538363 SETD1BQ9UPS6 1966 aaKnown RBP15.1■□□□□ 0.01
TNFRSF1A-211ENST00000538363 VGFO15240 615 aaPredicted RBP15.09■□□□□ 0.01
TNFRSF1A-211ENST00000538363 UHRF1BP1Q6BDS2 1440 aa15.09■□□□□ 0.01
TNFRSF1A-211ENST00000538363 TMEM131LA2VDJ0 1609 aa15.08■□□□□ 0
TNFRSF1A-211ENST00000538363 NUTM2DQ5VT03 806 aaPredicted RBP15.08■□□□□ 0
TNFRSF1A-211ENST00000538363 LMTK3Q96Q04 1460 aa15.08■□□□□ 0
TNFRSF1A-211ENST00000538363 SPATA31E1Q6ZUB1 1445 aa15.07■□□□□ 0
TNFRSF1A-211ENST00000538363 A2ML1A8K2U0 1454 aa15.07■□□□□ 0
TNFRSF1A-211ENST00000538363 NLRP1Q9C000 1473 aa15.07■□□□□ 0
TNFRSF1A-211ENST00000538363 THEMISQ8N1K5 641 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-211ENST00000538363 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.06■□□□□ 0
TNFRSF1A-211ENST00000538363 EID1Q9Y6B2 187 aa15.06■□□□□ 0
TNFRSF1A-211ENST00000538363 POLR1AO95602 1720 aaPredicted RBP15.06■□□□□ 0
TNFRSF1A-211ENST00000538363 RNF39Q9H2S5 420 aa15.05■□□□□ -0
TNFRSF1A-211ENST00000538363 KDM5AP29375 1690 aaKnown RBP15.05■□□□□ -0
TNFRSF1A-211ENST00000538363 IFT172Q9UG01 1749 aa15.05■□□□□ -0
TNFRSF1A-211ENST00000538363 NBPF8Q3BBV2 869 aa15.04■□□□□ -0
TNFRSF1A-211ENST00000538363 CARD11Q9BXL7 1154 aa15.03■□□□□ -0
TNFRSF1A-211ENST00000538363 PPLO60437 1756 aa15.03■□□□□ -0
TNFRSF1A-211ENST00000538363 ROCK2O75116 1388 aaKnown RBP15.01□□□□□ -0.01
TNFRSF1A-211ENST00000538363 NEURL4Q96JN8 1562 aa15.01□□□□□ -0.01
TNFRSF1A-211ENST00000538363 ADGRF5Q8IZF2 1346 aa15□□□□□ -0.01
TNFRSF1A-211ENST00000538363 SLC4A2P04920 1241 aa15□□□□□ -0.01
TNFRSF1A-211ENST00000538363 EIF4G2P78344 907 aaKnown RBP eCLIP15□□□□□ -0.01
TNFRSF1A-211ENST00000538363 TXNDC2Q86VQ3 553 aa15□□□□□ -0.01
TNFRSF1A-211ENST00000538363 RIMS2Q9UQ26 1411 aa15□□□□□ -0.01
TNFRSF1A-211ENST00000538363 NEXMIFQ5QGS0 1516 aa14.99□□□□□ -0.01
TNFRSF1A-211ENST00000538363 ZNF316A6NFI3 1004 aaPredicted RBP14.99□□□□□ -0.01
TNFRSF1A-211ENST00000538363 HSPA2P54652 639 aa14.98□□□□□ -0.01
TNFRSF1A-211ENST00000538363 PRAG1Q86YV5 1406 aa14.98□□□□□ -0.01
TNFRSF1A-211ENST00000538363 IQGAP1P46940 1657 aa14.97□□□□□ -0.01
TNFRSF1A-211ENST00000538363 CFAP70Q5T0N1 1121 aa14.97□□□□□ -0.01
TNFRSF1A-211ENST00000538363 STRCQ7RTU9 1775 aa14.97□□□□□ -0.01
TNFRSF1A-211ENST00000538363 MYOM2P54296 1465 aa14.96□□□□□ -0.01
TNFRSF1A-211ENST00000538363 ANKLE2Q86XL3 938 aa14.96□□□□□ -0.01
TNFRSF1A-211ENST00000538363 NBPF1Q3BBV0 1214 aa14.95□□□□□ -0.02
TNFRSF1A-211ENST00000538363 HIRIP3Q9BW71 556 aaPredicted RBP14.95□□□□□ -0.02
TNFRSF1A-211ENST00000538363 SLIT1O75093 1534 aa14.95□□□□□ -0.02
TNFRSF1A-211ENST00000538363 TMEM2Q9UHN6 1383 aa14.95□□□□□ -0.02
TNFRSF1A-211ENST00000538363 HSPA5P11021 654 aaKnown RBP14.94□□□□□ -0.02
TNFRSF1A-211ENST00000538363 ARHGAP23Q9P227 1491 aa14.94□□□□□ -0.02
TNFRSF1A-211ENST00000538363 ZFYVE9O95405 1425 aa14.93□□□□□ -0.02
TNFRSF1A-211ENST00000538363 C14orf93Q9H972 538 aaKnown RBP14.93□□□□□ -0.02
TNFRSF1A-211ENST00000538363 RALGAPBQ86X10 1494 aa14.93□□□□□ -0.02
TNFRSF1A-211ENST00000538363 NRXN3Q9Y4C0 1643 aa14.92□□□□□ -0.02
TNFRSF1A-211ENST00000538363 SCAF11Q99590 1463 aaKnown RBP14.92□□□□□ -0.02
TNFRSF1A-211ENST00000538363 POLR3GLQ9BT43 218 aa14.91□□□□□ -0.02
TNFRSF1A-211ENST00000538363 STK26Q9P289 416 aa14.91□□□□□ -0.02
TNFRSF1A-211ENST00000538363 TRPM1Q7Z4N2 1603 aa14.91□□□□□ -0.02
TNFRSF1A-211ENST00000538363 EIF3AQ14152 1382 aaKnown RBP14.9□□□□□ -0.02
TNFRSF1A-211ENST00000538363 USP47Q96K76 1375 aa14.9□□□□□ -0.02
TNFRSF1A-211ENST00000538363 TMEM132EQ6IEE7 984 aa14.9□□□□□ -0.02
TNFRSF1A-211ENST00000538363 SETD1AO15047 1707 aaKnown RBP14.89□□□□□ -0.03
TNFRSF1A-211ENST00000538363 TRAK1Q9UPV9 953 aa14.89□□□□□ -0.03
TNFRSF1A-211ENST00000538363 LTKP29376 864 aa14.88□□□□□ -0.03
TNFRSF1A-211ENST00000538363 PIK3C2GO75747 1445 aa14.88□□□□□ -0.03
TNFRSF1A-211ENST00000538363 KIAA1210Q9ULL0 1709 aa14.88□□□□□ -0.03
TNFRSF1A-211ENST00000538363 ILDR1Q86SU0 546 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-211ENST00000538363 POGKQ9P215 609 aa14.87□□□□□ -0.03
TNFRSF1A-211ENST00000538363 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
TNFRSF1A-211ENST00000538363 LAMC1P11047 1609 aa14.86□□□□□ -0.03
TNFRSF1A-211ENST00000538363 ST20-MTHFSA0A0A6YYL1 179 aa14.86□□□□□ -0.03
TNFRSF1A-211ENST00000538363 SLC26A8Q96RN1 970 aa14.86□□□□□ -0.03
TNFRSF1A-211ENST00000538363 NRXN1Q9ULB1 1477 aa14.86□□□□□ -0.03
TNFRSF1A-211ENST00000538363 NCKAP5LQ9HCH0 1330 aa14.86□□□□□ -0.03
TNFRSF1A-211ENST00000538363 PLEKHG1Q9ULL1 1385 aa14.85□□□□□ -0.03
TNFRSF1A-211ENST00000538363 SLC24A1O60721 1099 aa14.85□□□□□ -0.03
TNFRSF1A-211ENST00000538363 C1QBPQ07021 282 aaKnown RBP14.85□□□□□ -0.03
TNFRSF1A-211ENST00000538363 SETBP1Q9Y6X0 1596 aa14.85□□□□□ -0.03
TNFRSF1A-211ENST00000538363 NPHP4O75161 1426 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-211ENST00000538363 CACNB1Q02641 598 aaPredicted RBP14.84□□□□□ -0.03
TNFRSF1A-211ENST00000538363 ASXL1Q8IXJ9 1541 aa14.83□□□□□ -0.04
TNFRSF1A-211ENST00000538363 ALKQ9UM73 1620 aa14.83□□□□□ -0.04
TNFRSF1A-211ENST00000538363 GPRASP1Q5JY77 1395 aa14.83□□□□□ -0.04
TNFRSF1A-211ENST00000538363 TMF1P82094 1093 aa14.82□□□□□ -0.04
TNFRSF1A-211ENST00000538363 SAFB2Q14151 953 aaKnown RBP eCLIP14.81□□□□□ -0.04
TNFRSF1A-211ENST00000538363 TBX22Q9Y458 520 aa14.81□□□□□ -0.04
TNFRSF1A-211ENST00000538363 MED14O60244 1454 aa14.81□□□□□ -0.04
TNFRSF1A-211ENST00000538363 DIP2AQ14689 1571 aa14.81□□□□□ -0.04
TNFRSF1A-211ENST00000538363 STRCP1A6NGW2 1772 aa14.8□□□□□ -0.04
TNFRSF1A-211ENST00000538363 CDCA8Q53HL2 280 aa14.8□□□□□ -0.04
TNFRSF1A-211ENST00000538363 CENPJQ9HC77 1338 aaPredicted RBP14.8□□□□□ -0.04
TNFRSF1A-211ENST00000538363 ADAMTS13Q76LX8 1427 aa14.79□□□□□ -0.04
TNFRSF1A-211ENST00000538363 YTHDC2Q9H6S0 1430 aaKnown RBP14.78□□□□□ -0.04
TNFRSF1A-211ENST00000538363 FBXO41Q8TF61 875 aa14.78□□□□□ -0.04
TNFRSF1A-211ENST00000538363 PRAM1Q96QH2 718 aa14.77□□□□□ -0.05
TNFRSF1A-211ENST00000538363 AMOTL2Q9Y2J4 779 aa14.77□□□□□ -0.05
TNFRSF1A-211ENST00000538363 CHD2O14647 1828 aaKnown RBP14.77□□□□□ -0.05
TNFRSF1A-211ENST00000538363 XRN1Q8IZH2 1706 aaKnown RBP14.77□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 113.1 ms