RNA–Protein interactions for RNA: ENST00000538174.6

PTPRB-203, Transcript of protein tyrosine phosphatase, receptor type B, humanhuman

TSL 1 (best)

Gene PTPRB, Length 2,661 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRB-203ENST00000538174 DCCP43146 1447 aa9.81□□□□□ -0.84
PTPRB-203ENST00000538174 TMEM132AQ24JP5 1023 aa9.81□□□□□ -0.84
PTPRB-203ENST00000538174 P3H3Q8IVL6 736 aa9.81□□□□□ -0.84
PTPRB-203ENST00000538174 ACIN1Q9UKV3 1341 aaKnown RBP9.8□□□□□ -0.84
PTPRB-203ENST00000538174 CCER1Q8TC90 406 aaPredicted RBP9.8□□□□□ -0.84
PTPRB-203ENST00000538174 CHMP4AQ9BY43 222 aa9.8□□□□□ -0.84
PTPRB-203ENST00000538174 PIK3R4Q99570 1358 aa9.8□□□□□ -0.84
PTPRB-203ENST00000538174 HAP1P54257 671 aaPredicted RBP9.79□□□□□ -0.84
PTPRB-203ENST00000538174 SPHKAPQ2M3C7 1700 aa9.79□□□□□ -0.84
PTPRB-203ENST00000538174 PKNOX2Q96KN3 472 aa9.79□□□□□ -0.84
PTPRB-203ENST00000538174 CHD2O14647 1828 aaKnown RBP9.78□□□□□ -0.84
PTPRB-203ENST00000538174 NHSL1Q5SYE7 1610 aa9.78□□□□□ -0.84
PTPRB-203ENST00000538174 UPF1Q92900 1129 aaKnown RBP eCLIP9.78□□□□□ -0.84
PTPRB-203ENST00000538174 DUOX2Q9NRD8 1548 aa9.77□□□□□ -0.85
PTPRB-203ENST00000538174 ADGRB3O60242 1522 aa9.76□□□□□ -0.85
PTPRB-203ENST00000538174 CCNB3Q8WWL7 1395 aa9.76□□□□□ -0.85
PTPRB-203ENST00000538174 ARID3CA6NKF2 412 aa9.76□□□□□ -0.85
PTPRB-203ENST00000538174 POTEAQ6S8J7 498 aa9.76□□□□□ -0.85
PTPRB-203ENST00000538174 CCDC125Q86Z20 511 aa9.76□□□□□ -0.85
PTPRB-203ENST00000538174 KCNA6P17658 529 aa9.75□□□□□ -0.85
PTPRB-203ENST00000538174 UNC13BO14795 1591 aa9.75□□□□□ -0.85
PTPRB-203ENST00000538174 ERBINQ96RT1 1412 aa9.75□□□□□ -0.85
PTPRB-203ENST00000538174 EFCAB6Q5THR3 1501 aa9.75□□□□□ -0.85
PTPRB-203ENST00000538174 PIP4K2BP78356 416 aa9.75□□□□□ -0.85
PTPRB-203ENST00000538174 RPRD2Q5VT52 1461 aaKnown RBP9.74□□□□□ -0.85
PTPRB-203ENST00000538174 CEP152O94986 1710 aa9.74□□□□□ -0.85
PTPRB-203ENST00000538174 SETD5Q9C0A6 1442 aa9.74□□□□□ -0.85
PTPRB-203ENST00000538174 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.73□□□□□ -0.85
PTPRB-203ENST00000538174 NEFLP07196 543 aa9.73□□□□□ -0.85
PTPRB-203ENST00000538174 PIK3C2BO00750 1634 aa9.72□□□□□ -0.85
PTPRB-203ENST00000538174 COL22A1Q8NFW1 1626 aaPredicted RBP9.72□□□□□ -0.85
PTPRB-203ENST00000538174 PRAG1Q86YV5 1406 aa9.72□□□□□ -0.85
PTPRB-203ENST00000538174 TMEM2Q9UHN6 1383 aa9.72□□□□□ -0.85
PTPRB-203ENST00000538174 ZNF316A6NFI3 1004 aaPredicted RBP9.71□□□□□ -0.85
PTPRB-203ENST00000538174 SAMD1Q6SPF0 538 aaPredicted RBP9.71□□□□□ -0.85
PTPRB-203ENST00000538174 MYT1LQ9UL68 1186 aa9.71□□□□□ -0.85
PTPRB-203ENST00000538174 MSH6P52701 1360 aa9.71□□□□□ -0.86
PTPRB-203ENST00000538174 DHX37Q8IY37 1157 aaKnown RBP9.71□□□□□ -0.86
PTPRB-203ENST00000538174 CROCC2H7BZ55 1655 aa9.71□□□□□ -0.86
PTPRB-203ENST00000538174 DHX57Q6P158 1386 aaKnown RBP9.7□□□□□ -0.86
PTPRB-203ENST00000538174 ATAD2Q6PL18 1390 aa9.7□□□□□ -0.86
PTPRB-203ENST00000538174 SCAF1Q9H7N4 1312 aaKnown RBP9.7□□□□□ -0.86
PTPRB-203ENST00000538174 CENPBP07199 599 aaPredicted RBP9.69□□□□□ -0.86
PTPRB-203ENST00000538174 CFDP1Q9UEE9 299 aaPredicted RBP9.69□□□□□ -0.86
PTPRB-203ENST00000538174 LRP6O75581 1613 aa9.69□□□□□ -0.86
PTPRB-203ENST00000538174 PTCH1Q13635 1447 aa9.69□□□□□ -0.86
PTPRB-203ENST00000538174 EID1Q9Y6B2 187 aa9.69□□□□□ -0.86
PTPRB-203ENST00000538174 NOS1P29475 1434 aa9.68□□□□□ -0.86
PTPRB-203ENST00000538174 PLEKHG1Q9ULL1 1385 aa9.68□□□□□ -0.86
PTPRB-203ENST00000538174 TMEM94Q12767 1356 aa9.67□□□□□ -0.86
PTPRB-203ENST00000538174 WASHC2CQ9Y4E1 1318 aa9.67□□□□□ -0.86
PTPRB-203ENST00000538174 MTUS2Q5JR59 1369 aa9.67□□□□□ -0.86
PTPRB-203ENST00000538174 IQGAP3Q86VI3 1631 aa9.66□□□□□ -0.86
PTPRB-203ENST00000538174 TAF7LQ5H9L4 462 aa9.66□□□□□ -0.86
PTPRB-203ENST00000538174 TRPM2O94759 1503 aa9.66□□□□□ -0.86
PTPRB-203ENST00000538174 XRN1Q8IZH2 1706 aaKnown RBP9.65□□□□□ -0.86
PTPRB-203ENST00000538174 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.65□□□□□ -0.86
PTPRB-203ENST00000538174 ZFYVE9O95405 1425 aa9.65□□□□□ -0.86
PTPRB-203ENST00000538174 RXRBP28702 533 aa9.64□□□□□ -0.87
PTPRB-203ENST00000538174 GGT6Q6P531 493 aa9.64□□□□□ -0.87
PTPRB-203ENST00000538174 MARF1Q9Y4F3 1742 aaKnown RBP9.64□□□□□ -0.87
PTPRB-203ENST00000538174 DIEXFQ68CQ4 756 aaKnown RBP9.64□□□□□ -0.87
PTPRB-203ENST00000538174 BRD2P25440 801 aaKnown RBP9.63□□□□□ -0.87
PTPRB-203ENST00000538174 HDGFP51858 240 aaKnown RBP9.63□□□□□ -0.87
PTPRB-203ENST00000538174 BCL11BQ9C0K0 894 aaPredicted RBP9.63□□□□□ -0.87
PTPRB-203ENST00000538174 ANO8Q9HCE9 1232 aaPredicted RBP9.63□□□□□ -0.87
PTPRB-203ENST00000538174 GCC2Q8IWJ2 1684 aa9.63□□□□□ -0.87
PTPRB-203ENST00000538174 HNRNPMP52272 730 aaKnown RBP eCLIP9.63□□□□□ -0.87
PTPRB-203ENST00000538174 RGS12O14924 1447 aa9.63□□□□□ -0.87
PTPRB-203ENST00000538174 RBM6P78332 1123 aaKnown RBP9.61□□□□□ -0.87
PTPRB-203ENST00000538174 ASXL1Q8IXJ9 1541 aa9.61□□□□□ -0.87
PTPRB-203ENST00000538174 CNKSR2Q8WXI2 1034 aa9.61□□□□□ -0.87
PTPRB-203ENST00000538174 TBX22Q9Y458 520 aa9.61□□□□□ -0.87
PTPRB-203ENST00000538174 SETBP1Q9Y6X0 1596 aa9.61□□□□□ -0.87
PTPRB-203ENST00000538174 KIF3BO15066 747 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 SLC52A1Q9NWF4 448 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 ATRNO75882 1429 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 TMEM131LA2VDJ0 1609 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 KANK4Q5T7N3 995 aaPredicted RBP9.6□□□□□ -0.87
PTPRB-203ENST00000538174 CADPS2Q86UW7 1296 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 KANK1Q14678 1352 aa9.6□□□□□ -0.87
PTPRB-203ENST00000538174 FBXO31Q5XUX0 539 aaPredicted RBP9.59□□□□□ -0.87
PTPRB-203ENST00000538174 SLAIN2Q9P270 581 aa9.59□□□□□ -0.87
PTPRB-203ENST00000538174 MYOM3Q5VTT5 1437 aa9.59□□□□□ -0.87
PTPRB-203ENST00000538174 TXNDC2Q86VQ3 553 aa9.59□□□□□ -0.87
PTPRB-203ENST00000538174 NGLY1Q96IV0 654 aa9.59□□□□□ -0.87
PTPRB-203ENST00000538174 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.59□□□□□ -0.88
PTPRB-203ENST00000538174 ZRANB1Q9UGI0 708 aa9.59□□□□□ -0.88
PTPRB-203ENST00000538174 CDK11BP21127 795 aaKnown RBP9.58□□□□□ -0.88
PTPRB-203ENST00000538174 ADGRL2O95490 1459 aa9.58□□□□□ -0.88
PTPRB-203ENST00000538174 HFM1A2PYH4 1435 aa9.57□□□□□ -0.88
PTPRB-203ENST00000538174 LTKP29376 864 aa9.56□□□□□ -0.88
PTPRB-203ENST00000538174 FGD1P98174 961 aa9.56□□□□□ -0.88
PTPRB-203ENST00000538174 NEXMIFQ5QGS0 1516 aa9.55□□□□□ -0.88
PTPRB-203ENST00000538174 TSPY4P0CV99 314 aa9.55□□□□□ -0.88
PTPRB-203ENST00000538174 TSPY10P0CW01 314 aa9.55□□□□□ -0.88
PTPRB-203ENST00000538174 PROSER2Q86WR7 435 aaPredicted RBP9.55□□□□□ -0.88
PTPRB-203ENST00000538174 BLMP54132 1417 aaPredicted RBP9.54□□□□□ -0.88
PTPRB-203ENST00000538174 NWD2Q9ULI1 1742 aa9.54□□□□□ -0.88
PTPRB-203ENST00000538174 C19orf44Q9H6X5 657 aa9.54□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms