RNA–Protein interactions for RNA: ENST00000537934.5

SEMA4D-221, Transcript of semaphorin 4D, humanhuman

TSL 2

Gene SEMA4D, Length 2,710 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-221ENST00000537934 PRDM15P57071 1507 aaPredicted RBP14.97□□□□□ -0.01
SEMA4D-221ENST00000537934 COL17A1Q9UMD9 1497 aaPredicted RBP14.97□□□□□ -0.01
SEMA4D-221ENST00000537934 E9PCH4 1651 aa14.96□□□□□ -0.01
SEMA4D-221ENST00000537934 VWDEQ8N2E2 1590 aa14.96□□□□□ -0.01
SEMA4D-221ENST00000537934 GGT6Q6P531 493 aa14.95□□□□□ -0.02
SEMA4D-221ENST00000537934 DCAF11Q8TEB1 546 aa14.95□□□□□ -0.02
SEMA4D-221ENST00000537934 KANK1Q14678 1352 aa14.95□□□□□ -0.02
SEMA4D-221ENST00000537934 ZMYM4Q5VZL5 1548 aa14.94□□□□□ -0.02
SEMA4D-221ENST00000537934 CCDC144AA2RUR9 1427 aa14.94□□□□□ -0.02
SEMA4D-221ENST00000537934 RNF17Q9BXT8 1623 aaKnown RBP14.93□□□□□ -0.02
SEMA4D-221ENST00000537934 NBPF8Q3BBV2 869 aa14.93□□□□□ -0.02
SEMA4D-221ENST00000537934 TET3O43151 1660 aa14.93□□□□□ -0.02
SEMA4D-221ENST00000537934 DNAJC5Q9H3Z4 198 aa14.92□□□□□ -0.02
SEMA4D-221ENST00000537934 CEP152O94986 1710 aa14.92□□□□□ -0.02
SEMA4D-221ENST00000537934 ATP10AO60312 1499 aa14.91□□□□□ -0.02
SEMA4D-221ENST00000537934 RRP1P56182 461 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-221ENST00000537934 ZNF326Q5BKZ1 582 aaKnown RBP14.9□□□□□ -0.02
SEMA4D-221ENST00000537934 EXOC6Q8TAG9 804 aa14.9□□□□□ -0.02
SEMA4D-221ENST00000537934 DAXXQ9UER7 740 aaPredicted RBP14.9□□□□□ -0.02
SEMA4D-221ENST00000537934 BCORL1Q5H9F3 1711 aa14.9□□□□□ -0.02
SEMA4D-221ENST00000537934 TRHP20396 242 aaPredicted RBP14.89□□□□□ -0.03
SEMA4D-221ENST00000537934 RGL3Q3MIN7 710 aa14.89□□□□□ -0.03
SEMA4D-221ENST00000537934 RRP9O43818 475 aaKnown RBP14.89□□□□□ -0.03
SEMA4D-221ENST00000537934 EFCAB6Q5THR3 1501 aa14.88□□□□□ -0.03
SEMA4D-221ENST00000537934 RRAGDQ9NQL2 400 aaPredicted RBP14.88□□□□□ -0.03
SEMA4D-221ENST00000537934 KDM2AQ9Y2K7 1162 aa14.88□□□□□ -0.03
SEMA4D-221ENST00000537934 SPHKAPQ2M3C7 1700 aa14.88□□□□□ -0.03
SEMA4D-221ENST00000537934 HSP90AA2PQ14568 343 aaPredicted RBP14.87□□□□□ -0.03
SEMA4D-221ENST00000537934 TRPM2O94759 1503 aa14.87□□□□□ -0.03
SEMA4D-221ENST00000537934 FRAT2O75474 233 aaPredicted RBP14.86□□□□□ -0.03
SEMA4D-221ENST00000537934 PTPRTO14522 1441 aa14.86□□□□□ -0.03
SEMA4D-221ENST00000537934 LMTK2Q8IWU2 1503 aa14.86□□□□□ -0.03
SEMA4D-221ENST00000537934 ABCC3O15438 1527 aa14.86□□□□□ -0.03
SEMA4D-221ENST00000537934 CFAP65Q6ZU64 1925 aaKnown RBP14.86□□□□□ -0.03
SEMA4D-221ENST00000537934 SIGLEC1Q9BZZ2 1709 aa14.85□□□□□ -0.03
SEMA4D-221ENST00000537934 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
SEMA4D-221ENST00000537934 UGGT1Q9NYU2 1555 aa14.85□□□□□ -0.03
SEMA4D-221ENST00000537934 NPATQ14207 1427 aa14.84□□□□□ -0.03
SEMA4D-221ENST00000537934 POLR1AO95602 1720 aaPredicted RBP14.84□□□□□ -0.03
SEMA4D-221ENST00000537934 CLTCL1P53675 1640 aa14.84□□□□□ -0.03
SEMA4D-221ENST00000537934 KIF7Q2M1P5 1343 aa14.84□□□□□ -0.03
SEMA4D-221ENST00000537934 ARHGEF40Q8TER5 1519 aa14.83□□□□□ -0.04
SEMA4D-221ENST00000537934 HSP90AA1P07900 732 aaKnown RBP14.82□□□□□ -0.04
SEMA4D-221ENST00000537934 CAMSAP1Q5T5Y3 1602 aa14.81□□□□□ -0.04
SEMA4D-221ENST00000537934 SPATA31E1Q6ZUB1 1445 aa14.81□□□□□ -0.04
SEMA4D-221ENST00000537934 PNISRQ8TF01 805 aaKnown RBP14.81□□□□□ -0.04
SEMA4D-221ENST00000537934 RCAN3Q9UKA8 241 aa14.8□□□□□ -0.04
SEMA4D-221ENST00000537934 UHRF1BP1Q6BDS2 1440 aa14.8□□□□□ -0.04
SEMA4D-221ENST00000537934 L1TD1Q5T7N2 865 aaKnown RBP14.8□□□□□ -0.04
SEMA4D-221ENST00000537934 REREQ9P2R6 1566 aa14.8□□□□□ -0.04
SEMA4D-221ENST00000537934 MLECQ14165 292 aa14.79□□□□□ -0.04
SEMA4D-221ENST00000537934 NAP1L5Q96NT1 182 aaPredicted RBP14.79□□□□□ -0.04
SEMA4D-221ENST00000537934 AGLP35573 1532 aa14.78□□□□□ -0.04
SEMA4D-221ENST00000537934 PNNQ9H307 717 aaKnown RBP14.77□□□□□ -0.04
SEMA4D-221ENST00000537934 PRAG1Q86YV5 1406 aa14.77□□□□□ -0.05
SEMA4D-221ENST00000537934 ZC3H13Q5T200 1668 aaKnown RBP14.77□□□□□ -0.05
SEMA4D-221ENST00000537934 RALGAPBQ86X10 1494 aa14.76□□□□□ -0.05
SEMA4D-221ENST00000537934 CLCN1P35523 988 aa14.76□□□□□ -0.05
SEMA4D-221ENST00000537934 LRPPRCP42704 1394 aaKnown RBP14.75□□□□□ -0.05
SEMA4D-221ENST00000537934 NOS1P29475 1434 aa14.74□□□□□ -0.05
SEMA4D-221ENST00000537934 MROH2AA6NES4 1674 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 SYNMO15061 1565 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 KIF1BO60333 1816 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 CHGAP10645 457 aaKnown RBP14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 TMC1Q8TDI8 760 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 CARD11Q9BXL7 1154 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 POGKQ9P215 609 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 ARHGAP31Q2M1Z3 1444 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 USP47Q96K76 1375 aa14.73□□□□□ -0.05
SEMA4D-221ENST00000537934 TRPM1Q7Z4N2 1603 aa14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 FAM161AQ3B820 660 aa14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 NBPF1Q3BBV0 1214 aa14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 ARID4BQ4LE39 1312 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 ROCK2O75116 1388 aaKnown RBP14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 CLTCQ00610 1675 aaKnown RBP14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 SENP3-EIF4A1A0A087X0R7 540 aa14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 FBXO31Q5XUX0 539 aaPredicted RBP14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 PDE3BQ13370 1112 aa14.72□□□□□ -0.05
SEMA4D-221ENST00000537934 SKAP1Q86WV1 359 aa14.71□□□□□ -0.05
SEMA4D-221ENST00000537934 C8orf34Q49A92 452 aa14.7□□□□□ -0.06
SEMA4D-221ENST00000537934 PREX1Q8TCU6 1659 aa14.7□□□□□ -0.06
SEMA4D-221ENST00000537934 ADGRB3O60242 1522 aa14.69□□□□□ -0.06
SEMA4D-221ENST00000537934 MADDQ8WXG6 1647 aa14.69□□□□□ -0.06
SEMA4D-221ENST00000537934 A0A0U1RQG5 324 aaPredicted RBP14.69□□□□□ -0.06
SEMA4D-221ENST00000537934 KTN1Q86UP2 1357 aaKnown RBP14.68□□□□□ -0.06
SEMA4D-221ENST00000537934 NEURL4Q96JN8 1562 aa14.68□□□□□ -0.06
SEMA4D-221ENST00000537934 PIK3C2BO00750 1634 aa14.68□□□□□ -0.06
SEMA4D-221ENST00000537934 IDI1Q13907 227 aa14.68□□□□□ -0.06
SEMA4D-221ENST00000537934 KDM2BQ8NHM5 1336 aa14.68□□□□□ -0.06
SEMA4D-221ENST00000537934 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
SEMA4D-221ENST00000537934 ADGRF5Q8IZF2 1346 aa14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 CNGB1Q14028 1251 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 CRBNQ96SW2 442 aa14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 ERVK-7P63135 1459 aa14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 BRD4O60885 1362 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 CENPJQ9HC77 1338 aaPredicted RBP14.66□□□□□ -0.06
SEMA4D-221ENST00000537934 IFT172Q9UG01 1749 aa14.65□□□□□ -0.06
SEMA4D-221ENST00000537934 ST20-MTHFSA0A0A6YYL1 179 aa14.65□□□□□ -0.06
SEMA4D-221ENST00000537934 CENPQQ7L2Z9 268 aaPredicted RBP14.65□□□□□ -0.06
SEMA4D-221ENST00000537934 GPRASP1Q5JY77 1395 aa14.65□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms