RNA–Protein interactions for RNA: ENST00000537842.5

TNFRSF1A-210, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 3

Gene TNFRSF1A, Length 404 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-210ENST00000537842 DAXXQ9UER7 740 aaPredicted RBP4.5□□□□□ -1.69
TNFRSF1A-210ENST00000537842 ADGRG1Q9Y653 693 aa4.5□□□□□ -1.69
TNFRSF1A-210ENST00000537842 IRF6O14896 467 aa4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 NEUROD2Q15784 382 aa4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 METTL3Q86U44 580 aaKnown RBP4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 KCTD12Q96CX2 325 aaKnown RBP4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 RABGEF1Q9UJ41 708 aa4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 ERCC6Q03468 1493 aa4.49□□□□□ -1.69
TNFRSF1A-210ENST00000537842 PDS5BQ9NTI5 1447 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 RCCD1A6NED2 376 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 AK7Q96M32 723 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 ARXQ96QS3 562 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 FANCD2Q9BXW9 1451 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 LAMC3Q9Y6N6 1575 aa4.48□□□□□ -1.69
TNFRSF1A-210ENST00000537842 MINK1Q8N4C8 1332 aaPredicted RBP4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 TK2O00142 265 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 OATP04181 439 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 DNAJB2P25686 324 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 BCAMP50895 628 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 FAM98CQ17RN3 349 aaKnown RBP4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 SWT1Q5T5J6 900 aaKnown RBP4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 SAMD7Q7Z3H4 446 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 RDH13Q8NBN7 331 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 ANKK1Q8NFD2 765 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 PXYLP1Q8TE99 480 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 PHOX2BQ99453 314 aa4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 GPBP1L1Q9HC44 474 aaPredicted RBP4.47□□□□□ -1.69
TNFRSF1A-210ENST00000537842 URB2Q14146 1524 aaKnown RBP4.46□□□□□ -1.69
TNFRSF1A-210ENST00000537842 DDX11L8A8MPP1 907 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 ONECUT3O60422 494 aaPredicted RBP4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 SLC4A3P48751 1232 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 HDGFP51858 240 aaKnown RBP4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 PTPN5P54829 565 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 WNT2BQ93097 391 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 LRCH3Q96II8 777 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 ZFRQ96KR1 1074 aaKnown RBP4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 MYT1LQ9UL68 1186 aa4.46□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TRIM66O15016 1216 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 PDE4DQ08499 809 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 PARP9Q8IXQ6 854 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TTC13Q8NBP0 860 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 SLC4A5Q9BY07 1137 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 CDKN2AIPQ9NXV6 580 aaPredicted RBP4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 ATP1B4Q9UN42 357 aaPredicted RBP4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 KIF21AQ7Z4S6 1674 aa4.45□□□□□ -1.7
TNFRSF1A-210ENST00000537842 THOC2Q8NI27 1593 aaKnown RBP4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 HRO43593 1189 aa4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 GIGYF2Q6Y7W6 1299 aaKnown RBP4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 RNF166Q96A37 237 aaPredicted RBP4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 EYA1Q99502 592 aa4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TMEM134Q9H6X4 195 aa4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 HPS5Q9UPZ3 1129 aa4.44□□□□□ -1.7
TNFRSF1A-210ENST00000537842 CUX2O14529 1486 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 MRC2Q9UBG0 1479 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 CLCN1P35523 988 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 LAPTM4BQ86VI4 370 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 GPCPD1Q9NPB8 672 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 CEP164Q9UPV0 1460 aa4.43□□□□□ -1.7
TNFRSF1A-210ENST00000537842 BHMG1C9JSJ3 638 aaPredicted RBP4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 CFHP08603 1231 aa4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 BRPF1P55201 1214 aaPredicted RBP4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 SPNS2Q8IVW8 549 aa4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 SLF2Q8IX21 1173 aa4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 REPIN1Q9BWE0 567 aaKnown RBP4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 PLSCR2Q9NRY7 297 aa4.42□□□□□ -1.7
TNFRSF1A-210ENST00000537842 WDR62O43379 1518 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 AMHR2Q16671 573 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TMEM132AQ24JP5 1023 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 THSD4Q6ZMP0 1018 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 KDM4CQ9H3R0 1056 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TIMELESSQ9UNS1 1208 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 GTF3C3Q9Y5Q9 886 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 TOPBP1Q92547 1522 aa4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 ZNF608Q9ULD9 1512 aaPredicted RBP4.41□□□□□ -1.7
TNFRSF1A-210ENST00000537842 SOWAHBA6NEL2 793 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 PPP4CP60510 307 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 SULF1Q8IWU6 871 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 FAM217BQ9NTX9 383 aaPredicted RBP4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 WBP1LQ9NX94 342 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 RAD54L2Q9Y4B4 1467 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 CUX1P39880 1505 aa4.4□□□□□ -1.71
TNFRSF1A-210ENST00000537842 AQRO60306 1485 aaKnown RBP eCLIP4.39□□□□□ -1.711e-7■■■■□ 20.2
TNFRSF1A-210ENST00000537842 MS4A1P11836 297 aa4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 SSTR3P32745 418 aaPredicted RBP4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 IL27Q8NEV9 243 aa4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 BEGAINQ9BUH8 593 aa4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 PCDH10Q9P2E7 1040 aa4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 TDRD9Q8NDG6 1382 aaKnown RBP4.39□□□□□ -1.71
TNFRSF1A-210ENST00000537842 COPS2P61201 443 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 MMRN1Q13201 1228 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 CSPP1Q1MSJ5 1256 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 PUS10Q3MIT2 529 aaKnown RBP4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 KMT5BQ4FZB7 885 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 RSPH4AQ5TD94 716 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 NUTM1Q86Y26 1132 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 HOMEZQ8IX15 550 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 FAM117AQ9C073 453 aa4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 TSR3Q9UJK0 312 aaKnown RBP4.38□□□□□ -1.71
TNFRSF1A-210ENST00000537842 SOGA1O94964 1423 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms