RNA–Protein interactions for RNA: ENST00000537606.5

SNX17-210, Transcript of sorting nexin 17, humanhuman

TSL 2 BASIC

Gene SNX17, Length 2,400 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX17-210ENST00000537606 PER1O15534 1290 aaPredicted RBP23.79■■□□□ 1.4
SNX17-210ENST00000537606 NEURL4Q96JN8 1562 aa23.79■■□□□ 1.4
SNX17-210ENST00000537606 CAMSAP1Q5T5Y3 1602 aa23.79■■□□□ 1.4
SNX17-210ENST00000537606 IQGAP1P46940 1657 aa23.78■■□□□ 1.4
SNX17-210ENST00000537606 SIGLEC1Q9BZZ2 1709 aa23.77■■□□□ 1.4
SNX17-210ENST00000537606 TMC1Q8TDI8 760 aa23.77■■□□□ 1.4
SNX17-210ENST00000537606 MYOM2P54296 1465 aa23.77■■□□□ 1.4
SNX17-210ENST00000537606 SENP3-EIF4A1A0A087X0R7 540 aa23.76■■□□□ 1.39
SNX17-210ENST00000537606 ADGRB3O60242 1522 aa23.76■■□□□ 1.39
SNX17-210ENST00000537606 CC2D1BQ5T0F9 858 aaKnown RBP23.75■■□□□ 1.39
SNX17-210ENST00000537606 SENP3Q9H4L4 574 aaPredicted RBP23.75■■□□□ 1.39
SNX17-210ENST00000537606 NEFLP07196 543 aa23.74■■□□□ 1.39
SNX17-210ENST00000537606 RALBP1Q15311 655 aa23.73■■□□□ 1.39
SNX17-210ENST00000537606 IFT172Q9UG01 1749 aa23.73■■□□□ 1.39
SNX17-210ENST00000537606 IDI1Q13907 227 aa23.73■■□□□ 1.39
SNX17-210ENST00000537606 MYBBP1AQ9BQG0 1328 aaKnown RBP23.72■■□□□ 1.39
SNX17-210ENST00000537606 KTN1Q86UP2 1357 aaKnown RBP23.71■■□□□ 1.39
SNX17-210ENST00000537606 FBXO31Q5XUX0 539 aaPredicted RBP23.71■■□□□ 1.39
SNX17-210ENST00000537606 PNISRQ8TF01 805 aaKnown RBP23.71■■□□□ 1.39
SNX17-210ENST00000537606 SYNMO15061 1565 aa23.7■■□□□ 1.39
SNX17-210ENST00000537606 ZMYM4Q5VZL5 1548 aa23.7■■□□□ 1.38
SNX17-210ENST00000537606 TMEM132EQ6IEE7 984 aa23.7■■□□□ 1.38
SNX17-210ENST00000537606 EIF3AQ14152 1382 aaKnown RBP23.7■■□□□ 1.38
SNX17-210ENST00000537606 KIAA1210Q9ULL0 1709 aa23.7■■□□□ 1.38
SNX17-210ENST00000537606 MLECQ14165 292 aa23.7■■□□□ 1.38
SNX17-210ENST00000537606 NRXN1Q9ULB1 1477 aa23.69■■□□□ 1.38
SNX17-210ENST00000537606 TRAK1Q9UPV9 953 aa23.68■■□□□ 1.38
SNX17-210ENST00000537606 ARHGAP31Q2M1Z3 1444 aa23.67■■□□□ 1.38
SNX17-210ENST00000537606 PARD3Q8TEW0 1356 aa23.66■■□□□ 1.38
SNX17-210ENST00000537606 C14orf93Q9H972 538 aaKnown RBP23.66■■□□□ 1.38
SNX17-210ENST00000537606 ZBED9Q6R2W3 1325 aa23.66■■□□□ 1.38
SNX17-210ENST00000537606 PPLO60437 1756 aa23.65■■□□□ 1.38
SNX17-210ENST00000537606 IRX6P78412 446 aaPredicted RBP23.65■■□□□ 1.38
SNX17-210ENST00000537606 CDCA8Q53HL2 280 aa23.65■■□□□ 1.38
SNX17-210ENST00000537606 RPGRIP1LQ68CZ1 1315 aa23.65■■□□□ 1.38
SNX17-210ENST00000537606 PIK3C2GO75747 1445 aa23.64■■□□□ 1.38
SNX17-210ENST00000537606 ZC3H13Q5T200 1668 aaKnown RBP23.63■■□□□ 1.37
SNX17-210ENST00000537606 BRD4O60885 1362 aaPredicted RBP23.63■■□□□ 1.37
SNX17-210ENST00000537606 KIF13AQ9H1H9 1805 aa23.63■■□□□ 1.37
SNX17-210ENST00000537606 PIK3C2BO00750 1634 aa23.63■■□□□ 1.37
SNX17-210ENST00000537606 NLRP13Q86W25 1043 aa23.62■■□□□ 1.37
SNX17-210ENST00000537606 SLC52A1Q9NWF4 448 aa23.62■■□□□ 1.37
SNX17-210ENST00000537606 VGFO15240 615 aaPredicted RBP23.61■■□□□ 1.37
SNX17-210ENST00000537606 KNSTRNQ9Y448 316 aa23.61■■□□□ 1.37
SNX17-210ENST00000537606 CENPJQ9HC77 1338 aaPredicted RBP23.58■■□□□ 1.37
SNX17-210ENST00000537606 ERVK-7P63135 1459 aa23.57■■□□□ 1.36
SNX17-210ENST00000537606 PREX1Q8TCU6 1659 aa23.57■■□□□ 1.36
SNX17-210ENST00000537606 NEXMIFQ5QGS0 1516 aa23.57■■□□□ 1.36
SNX17-210ENST00000537606 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
SNX17-210ENST00000537606 SETBP1Q9Y6X0 1596 aa23.54■■□□□ 1.36
SNX17-210ENST00000537606 AMER1Q5JTC6 1135 aaPredicted RBP23.54■■□□□ 1.36
SNX17-210ENST00000537606 STAG3Q9UJ98 1225 aa23.54■■□□□ 1.36
SNX17-210ENST00000537606 LRPPRCP42704 1394 aaKnown RBP23.54■■□□□ 1.36
SNX17-210ENST00000537606 MYO5BQ9ULV0 1848 aa23.53■■□□□ 1.36
SNX17-210ENST00000537606 KDM5AP29375 1690 aaKnown RBP23.52■■□□□ 1.36
SNX17-210ENST00000537606 AGLP35573 1532 aa23.51■■□□□ 1.35
SNX17-210ENST00000537606 MYOM1P52179 1685 aa23.51■■□□□ 1.35
SNX17-210ENST00000537606 TSHZ2Q9NRE2 1034 aa23.51■■□□□ 1.35
SNX17-210ENST00000537606 SALL2Q9Y467 1007 aaPredicted RBP23.51■■□□□ 1.35
SNX17-210ENST00000537606 SLC24A1O60721 1099 aa23.51■■□□□ 1.35
SNX17-210ENST00000537606 STK26Q9P289 416 aa23.51■■□□□ 1.35
SNX17-210ENST00000537606 CLTCQ00610 1675 aaKnown RBP23.5■■□□□ 1.35
SNX17-210ENST00000537606 REREQ9P2R6 1566 aa23.5■■□□□ 1.35
SNX17-210ENST00000537606 SAFB2Q14151 953 aaKnown RBP eCLIP23.5■■□□□ 1.35
SNX17-210ENST00000537606 TMEM131LA2VDJ0 1609 aa23.49■■□□□ 1.35
SNX17-210ENST00000537606 CARD14Q9BXL6 1004 aa23.48■■□□□ 1.35
SNX17-210ENST00000537606 PPP6R1Q9UPN7 881 aa23.48■■□□□ 1.35
SNX17-210ENST00000537606 MYO3AQ8NEV4 1616 aa23.47■■□□□ 1.35
SNX17-210ENST00000537606 PPP2R1AP30153 589 aa23.47■■□□□ 1.35
SNX17-210ENST00000537606 SBNO2Q9Y2G9 1366 aa23.46■■□□□ 1.35
SNX17-210ENST00000537606 SLC12A5Q9H2X9 1139 aa23.45■■□□□ 1.34
SNX17-210ENST00000537606 ESF1Q9H501 851 aaKnown RBP23.45■■□□□ 1.34
SNX17-210ENST00000537606 ARHGEF40Q8TER5 1519 aa23.45■■□□□ 1.34
SNX17-210ENST00000537606 ASXL1Q8IXJ9 1541 aa23.44■■□□□ 1.34
SNX17-210ENST00000537606 QRICH2Q9H0J4 1663 aa23.44■■□□□ 1.34
SNX17-210ENST00000537606 ZFYVE9O95405 1425 aa23.42■■□□□ 1.34
SNX17-210ENST00000537606 NUDCQ9Y266 331 aa23.4■■□□□ 1.34
SNX17-210ENST00000537606 ZMYM3Q14202 1370 aa23.39■■□□□ 1.34
SNX17-210ENST00000537606 SMG6Q86US8 1419 aaKnown RBP23.39■■□□□ 1.33
SNX17-210ENST00000537606 CABP2Q9NPB3 220 aa23.38■■□□□ 1.33
SNX17-210ENST00000537606 ADAMTS8Q9UP79 889 aa23.37■■□□□ 1.33
SNX17-210ENST00000537606 ARHGEF28Q8N1W1 1705 aaKnown RBP23.36■■□□□ 1.33
SNX17-210ENST00000537606 EVC2Q86UK5 1308 aa23.36■■□□□ 1.33
SNX17-210ENST00000537606 SPATA31D1Q6ZQQ2 1576 aa23.35■■□□□ 1.33
SNX17-210ENST00000537606 A2ML1A8K2U0 1454 aa23.35■■□□□ 1.33
SNX17-210ENST00000537606 PRAM1Q96QH2 718 aa23.34■■□□□ 1.33
SNX17-210ENST00000537606 NPC1L1Q9UHC9 1359 aa23.34■■□□□ 1.33
SNX17-210ENST00000537606 MINK1Q8N4C8 1332 aaPredicted RBP23.33■■□□□ 1.33
SNX17-210ENST00000537606 NSD3Q9BZ95 1437 aa23.33■■□□□ 1.33
SNX17-210ENST00000537606 POGKQ9P215 609 aa23.32■■□□□ 1.32
SNX17-210ENST00000537606 TULP4Q9NRJ4 1543 aa23.32■■□□□ 1.32
SNX17-210ENST00000537606 TNNT2P45379 298 aaPredicted RBP23.31■■□□□ 1.32
SNX17-210ENST00000537606 WDR43Q15061 677 aaKnown RBP eCLIP23.31■■□□□ 1.32
SNX17-210ENST00000537606 YTHDC2Q9H6S0 1430 aaKnown RBP23.31■■□□□ 1.32
SNX17-210ENST00000537606 RIMS2Q9UQ26 1411 aa23.31■■□□□ 1.32
SNX17-210ENST00000537606 TRHP20396 242 aaPredicted RBP23.3■■□□□ 1.32
SNX17-210ENST00000537606 SRPK2P78362 688 aaKnown RBP23.3■■□□□ 1.32
SNX17-210ENST00000537606 ALKQ9UM73 1620 aa23.3■■□□□ 1.32
SNX17-210ENST00000537606 CDCA7LQ96GN5 454 aa23.29■■□□□ 1.32
SNX17-210ENST00000537606 PLPPR3Q6T4P5 718 aa23.29■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms