RNA–Protein interactions for RNA: ENST00000537162.5

CPSF7-217, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 801 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-217ENST00000537162 EEA1Q15075 1411 aa15.9■□□□□ 0.14
CPSF7-217ENST00000537162 YY1P25490 414 aa15.88■□□□□ 0.13
CPSF7-217ENST00000537162 BRINP3Q76B58 766 aa15.88■□□□□ 0.13
CPSF7-217ENST00000537162 DEFB132Q7Z7B7 95 aa15.88■□□□□ 0.13
CPSF7-217ENST00000537162 CCDC125Q86Z20 511 aa15.88■□□□□ 0.13
CPSF7-217ENST00000537162 NHSL1Q5SYE7 1610 aa15.87■□□□□ 0.13
CPSF7-217ENST00000537162 SETD5Q9C0A6 1442 aa15.86■□□□□ 0.13
CPSF7-217ENST00000537162 UBTFP17480 764 aaKnown RBP15.86■□□□□ 0.13
CPSF7-217ENST00000537162 EFCAB6Q5THR3 1501 aa15.85■□□□□ 0.13
CPSF7-217ENST00000537162 PSDA5PKW4 1024 aaPredicted RBP15.85■□□□□ 0.13
CPSF7-217ENST00000537162 CCDC141Q6ZP82 1450 aa15.84■□□□□ 0.13
CPSF7-217ENST00000537162 ADAMTS2O95450 1211 aa15.84■□□□□ 0.13
CPSF7-217ENST00000537162 HRCP23327 699 aa15.83■□□□□ 0.12
CPSF7-217ENST00000537162 PNPLA6Q8IY17 1366 aa15.83■□□□□ 0.12
CPSF7-217ENST00000537162 ASXL1Q8IXJ9 1541 aa15.83■□□□□ 0.12
CPSF7-217ENST00000537162 DDX17Q92841 729 aaKnown RBP15.82■□□□□ 0.12
CPSF7-217ENST00000537162 USP21Q9UK80 565 aa15.82■□□□□ 0.12
CPSF7-217ENST00000537162 ATRNO75882 1429 aa15.81■□□□□ 0.12
CPSF7-217ENST00000537162 C14orf37Q86TY3 774 aa15.81■□□□□ 0.12
CPSF7-217ENST00000537162 BCL9LQ86UU0 1499 aa15.81■□□□□ 0.12
CPSF7-217ENST00000537162 CADPS2Q86UW7 1296 aa15.81■□□□□ 0.12
CPSF7-217ENST00000537162 FYCO1Q9BQS8 1478 aa15.8■□□□□ 0.12
CPSF7-217ENST00000537162 BLMP54132 1417 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-217ENST00000537162 STAG3Q9UJ98 1225 aa15.8■□□□□ 0.12
CPSF7-217ENST00000537162 TRPC5Q9UL62 973 aaPredicted RBP15.8■□□□□ 0.12
CPSF7-217ENST00000537162 NCOA3Q9Y6Q9 1424 aa15.79■□□□□ 0.12
CPSF7-217ENST00000537162 ATF3P18847 181 aa15.79■□□□□ 0.12
CPSF7-217ENST00000537162 BCANQ96GW7 911 aa15.79■□□□□ 0.12
CPSF7-217ENST00000537162 EIF2AK4Q9P2K8 1649 aaKnown RBP15.79■□□□□ 0.12
CPSF7-217ENST00000537162 IDI1Q13907 227 aa15.78■□□□□ 0.12
CPSF7-217ENST00000537162 C19orf44Q9H6X5 657 aa15.78■□□□□ 0.12
CPSF7-217ENST00000537162 LRRC59Q96AG4 307 aaKnown RBP15.77■□□□□ 0.12
CPSF7-217ENST00000537162 ARHGAP31Q2M1Z3 1444 aa15.77■□□□□ 0.11
CPSF7-217ENST00000537162 BRWD3Q6RI45 1802 aa15.75■□□□□ 0.11
CPSF7-217ENST00000537162 FNBP4Q8N3X1 1017 aaPredicted RBP15.73■□□□□ 0.11
CPSF7-217ENST00000537162 ADGRB3O60242 1522 aa15.72■□□□□ 0.11
CPSF7-217ENST00000537162 MTUS2Q5JR59 1369 aa15.72■□□□□ 0.11
CPSF7-217ENST00000537162 MYO5BQ9ULV0 1848 aa15.71■□□□□ 0.11
CPSF7-217ENST00000537162 MST1RQ04912 1400 aa15.71■□□□□ 0.11
CPSF7-217ENST00000537162 ARHGEF5Q12774 1597 aa15.7■□□□□ 0.1
CPSF7-217ENST00000537162 SENP3-EIF4A1A0A087X0R7 540 aa15.7■□□□□ 0.1
CPSF7-217ENST00000537162 PLEKHG1Q9ULL1 1385 aa15.69■□□□□ 0.1
CPSF7-217ENST00000537162 ZFYVE9O95405 1425 aa15.68■□□□□ 0.1
CPSF7-217ENST00000537162 UNC13BO14795 1591 aa15.67■□□□□ 0.1
CPSF7-217ENST00000537162 GLI3P10071 1580 aa15.67■□□□□ 0.1
CPSF7-217ENST00000537162 RSPH4AQ5TD94 716 aa15.67■□□□□ 0.1
CPSF7-217ENST00000537162 TSPY4P0CV99 314 aa15.66■□□□□ 0.1
CPSF7-217ENST00000537162 TSPY10P0CW01 314 aa15.66■□□□□ 0.1
CPSF7-217ENST00000537162 TBX22Q9Y458 520 aa15.66■□□□□ 0.1
CPSF7-217ENST00000537162 GJD4Q96KN9 370 aaPredicted RBP15.65■□□□□ 0.1
CPSF7-217ENST00000537162 ADAMTS13Q76LX8 1427 aa15.65■□□□□ 0.1
CPSF7-217ENST00000537162 SF3B2Q13435 895 aaKnown RBP15.64■□□□□ 0.09
CPSF7-217ENST00000537162 PTCH1Q13635 1447 aa15.64■□□□□ 0.09
CPSF7-217ENST00000537162 R3HDM1Q15032 1099 aaKnown RBP15.64■□□□□ 0.09
CPSF7-217ENST00000537162 PTPRUQ92729 1446 aa15.64■□□□□ 0.09
CPSF7-217ENST00000537162 DCCP43146 1447 aa15.63■□□□□ 0.09
CPSF7-217ENST00000537162 CEP162Q5TB80 1403 aa15.63■□□□□ 0.09
CPSF7-217ENST00000537162 EHBP1L1Q8N3D4 1523 aa15.63■□□□□ 0.09
CPSF7-217ENST00000537162 SPHKAPQ2M3C7 1700 aa15.63■□□□□ 0.09
CPSF7-217ENST00000537162 MARF1Q9Y4F3 1742 aaKnown RBP15.63■□□□□ 0.09
CPSF7-217ENST00000537162 RIMS2Q9UQ26 1411 aa15.61■□□□□ 0.09
CPSF7-217ENST00000537162 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.093e-8■■□□□ 12.4
CPSF7-217ENST00000537162 COL22A1Q8NFW1 1626 aaPredicted RBP15.61■□□□□ 0.09
CPSF7-217ENST00000537162 GCC2Q8IWJ2 1684 aa15.6■□□□□ 0.09
CPSF7-217ENST00000537162 RALGAPBQ86X10 1494 aa15.6■□□□□ 0.09
CPSF7-217ENST00000537162 TRPM2O94759 1503 aa15.6■□□□□ 0.09
CPSF7-217ENST00000537162 LAMC1P11047 1609 aa15.6■□□□□ 0.09
CPSF7-217ENST00000537162 NOS1P29475 1434 aa15.6■□□□□ 0.09
CPSF7-217ENST00000537162 PPP1R15AO75807 674 aaPredicted RBP15.59■□□□□ 0.09
CPSF7-217ENST00000537162 AMOTL2Q9Y2J4 779 aa15.59■□□□□ 0.09
CPSF7-217ENST00000537162 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.59■□□□□ 0.09
CPSF7-217ENST00000537162 DUOX2Q9NRD8 1548 aa15.58■□□□□ 0.09
CPSF7-217ENST00000537162 CAMTA1Q9Y6Y1 1673 aa15.58■□□□□ 0.08
CPSF7-217ENST00000537162 ZNF784Q8NCA9 323 aaPredicted RBP15.57■□□□□ 0.08
CPSF7-217ENST00000537162 MYOM2P54296 1465 aa15.56■□□□□ 0.08
CPSF7-217ENST00000537162 TMEM131LA2VDJ0 1609 aa15.56■□□□□ 0.08
CPSF7-217ENST00000537162 NALCNQ8IZF0 1738 aa15.55■□□□□ 0.08
CPSF7-217ENST00000537162 XRN1Q8IZH2 1706 aaKnown RBP15.55■□□□□ 0.08
CPSF7-217ENST00000537162 PIK3R4Q99570 1358 aa15.55■□□□□ 0.08
CPSF7-217ENST00000537162 SOS2Q07890 1332 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-217ENST00000537162 EN1Q05925 392 aaPredicted RBP15.55■□□□□ 0.08
CPSF7-217ENST00000537162 SEPT12Q8IYM1 358 aa15.55■□□□□ 0.08
CPSF7-217ENST00000537162 BAG6P46379 1132 aa15.54■□□□□ 0.08
CPSF7-217ENST00000537162 C1QTNF8P60827 252 aa15.54■□□□□ 0.08
CPSF7-217ENST00000537162 LMTK2Q8IWU2 1503 aa15.53■□□□□ 0.08
CPSF7-217ENST00000537162 C1orf167Q5SNV9 1468 aa15.52■□□□□ 0.07
CPSF7-217ENST00000537162 SLC52A1Q9NWF4 448 aa15.51■□□□□ 0.07
CPSF7-217ENST00000537162 ORAI2Q96SN7 254 aa15.5■□□□□ 0.07
CPSF7-217ENST00000537162 KRT27Q7Z3Y8 459 aa15.49■□□□□ 0.07
CPSF7-217ENST00000537162 UNC5CLQ8IV45 518 aa15.49■□□□□ 0.07
CPSF7-217ENST00000537162 ADGRL3Q9HAR2 1447 aa15.49■□□□□ 0.07
CPSF7-217ENST00000537162 CEP350Q5VT06 3117 aa15.49■□□□□ 0.07
CPSF7-217ENST00000537162 KIF15Q9NS87 1388 aa15.49■□□□□ 0.07
CPSF7-217ENST00000537162 SLIT2O94813 1529 aa15.48■□□□□ 0.07
CPSF7-217ENST00000537162 ERBINQ96RT1 1412 aa15.48■□□□□ 0.07
CPSF7-217ENST00000537162 KANK1Q14678 1352 aa15.48■□□□□ 0.07
CPSF7-217ENST00000537162 RGPD1P0DJD0 1748 aa15.47■□□□□ 0.07
CPSF7-217ENST00000537162 TNS1Q9HBL0 1735 aaKnown RBP15.47■□□□□ 0.07
CPSF7-217ENST00000537162 NRXN3Q9Y4C0 1643 aa15.46■□□□□ 0.07
CPSF7-217ENST00000537162 HDGFP51858 240 aaKnown RBP15.46■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms