RNA–Protein interactions for RNA: ENST00000537063.1

UBE3B-207, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 3 BASIC

Gene UBE3B, Length 3,600 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-207ENST00000537063 MYBBP1AQ9BQG0 1328 aaKnown RBP12.72□□□□□ -0.37
UBE3B-207ENST00000537063 RIMBP3CA6NJZ7 1639 aa12.72□□□□□ -0.37
UBE3B-207ENST00000537063 RIMBP3BA6NNM3 1639 aa12.72□□□□□ -0.37
UBE3B-207ENST00000537063 RIMBP3Q9UFD9 1639 aa12.72□□□□□ -0.37
UBE3B-207ENST00000537063 FAM9BQ8IZU0 186 aa12.72□□□□□ -0.37
UBE3B-207ENST00000537063 ZMYM4Q5VZL5 1548 aa12.72□□□□□ -0.37
UBE3B-207ENST00000537063 POLR3GLQ9BT43 218 aa12.71□□□□□ -0.37
UBE3B-207ENST00000537063 NEFLP07196 543 aa12.7□□□□□ -0.38
UBE3B-207ENST00000537063 PNISRQ8TF01 805 aaKnown RBP12.7□□□□□ -0.38
UBE3B-207ENST00000537063 KDM5AP29375 1690 aaKnown RBP12.7□□□□□ -0.38
UBE3B-207ENST00000537063 DIP2BQ9P265 1576 aa12.69□□□□□ -0.38
UBE3B-207ENST00000537063 TMF1P82094 1093 aa12.69□□□□□ -0.38
UBE3B-207ENST00000537063 NOS1P29475 1434 aa12.69□□□□□ -0.38
UBE3B-207ENST00000537063 SMG6Q86US8 1419 aaKnown RBP12.69□□□□□ -0.38
UBE3B-207ENST00000537063 INSRP06213 1382 aa12.69□□□□□ -0.38
UBE3B-207ENST00000537063 ARHGAP31Q2M1Z3 1444 aa12.68□□□□□ -0.38
UBE3B-207ENST00000537063 EIF3AQ14152 1382 aaKnown RBP12.67□□□□□ -0.38
UBE3B-207ENST00000537063 MYT1LQ9UL68 1186 aa12.67□□□□□ -0.38
UBE3B-207ENST00000537063 REREQ9P2R6 1566 aa12.66□□□□□ -0.38
UBE3B-207ENST00000537063 PIK3C2GO75747 1445 aa12.66□□□□□ -0.38
UBE3B-207ENST00000537063 ERICH6BQ5W0A0 696 aa12.66□□□□□ -0.38
UBE3B-207ENST00000537063 ADGRB1O14514 1584 aa12.66□□□□□ -0.38
UBE3B-207ENST00000537063 SBNO2Q9Y2G9 1366 aa12.65□□□□□ -0.38
UBE3B-207ENST00000537063 NLRP13Q86W25 1043 aa12.64□□□□□ -0.39
UBE3B-207ENST00000537063 ERVK-7P63135 1459 aa12.64□□□□□ -0.39
UBE3B-207ENST00000537063 ADGRF5Q8IZF2 1346 aa12.63□□□□□ -0.39
UBE3B-207ENST00000537063 TMC1Q8TDI8 760 aa12.63□□□□□ -0.39
UBE3B-207ENST00000537063 NEXMIFQ5QGS0 1516 aa12.63□□□□□ -0.39
UBE3B-207ENST00000537063 PREX1Q8TCU6 1659 aa12.63□□□□□ -0.39
UBE3B-207ENST00000537063 NPC1L1Q9UHC9 1359 aa12.63□□□□□ -0.39
UBE3B-207ENST00000537063 PANK3Q9H999 370 aa12.62□□□□□ -0.39
UBE3B-207ENST00000537063 BLMP54132 1417 aaPredicted RBP12.62□□□□□ -0.39
UBE3B-207ENST00000537063 YEATS2Q9ULM3 1422 aa12.62□□□□□ -0.39
UBE3B-207ENST00000537063 ASXL1Q8IXJ9 1541 aa12.62□□□□□ -0.39
UBE3B-207ENST00000537063 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
UBE3B-207ENST00000537063 QRICH2Q9H0J4 1663 aa12.62□□□□□ -0.39
UBE3B-207ENST00000537063 CFAP65Q6ZU64 1925 aaKnown RBP12.61□□□□□ -0.39
UBE3B-207ENST00000537063 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
UBE3B-207ENST00000537063 RAPGEF3O95398 923 aa12.61□□□□□ -0.39
UBE3B-207ENST00000537063 BCANQ96GW7 911 aa12.61□□□□□ -0.39
UBE3B-207ENST00000537063 RNF123Q5XPI4 1314 aa12.61□□□□□ -0.39
UBE3B-207ENST00000537063 SLC24A1O60721 1099 aa12.6□□□□□ -0.39
UBE3B-207ENST00000537063 AGLP35573 1532 aa12.59□□□□□ -0.39
UBE3B-207ENST00000537063 ARHGEF28Q8N1W1 1705 aaKnown RBP12.59□□□□□ -0.39
UBE3B-207ENST00000537063 CFAP70Q5T0N1 1121 aa12.59□□□□□ -0.39
UBE3B-207ENST00000537063 TSHZ2Q9NRE2 1034 aa12.59□□□□□ -0.39
UBE3B-207ENST00000537063 NUDCQ9Y266 331 aa12.59□□□□□ -0.39
UBE3B-207ENST00000537063 TMEM131LA2VDJ0 1609 aa12.58□□□□□ -0.39
UBE3B-207ENST00000537063 ZFYVE9O95405 1425 aa12.58□□□□□ -0.4
UBE3B-207ENST00000537063 MYO5BQ9ULV0 1848 aa12.58□□□□□ -0.4
UBE3B-207ENST00000537063 GGT6Q6P531 493 aa12.57□□□□□ -0.4
UBE3B-207ENST00000537063 USP32Q8NFA0 1604 aa12.57□□□□□ -0.4
UBE3B-207ENST00000537063 AMER1Q5JTC6 1135 aaPredicted RBP12.57□□□□□ -0.4
UBE3B-207ENST00000537063 C14orf93Q9H972 538 aaKnown RBP12.57□□□□□ -0.4
UBE3B-207ENST00000537063 CNGB1Q14028 1251 aaPredicted RBP12.56□□□□□ -0.4
UBE3B-207ENST00000537063 KIF13AQ9H1H9 1805 aa12.55□□□□□ -0.4
UBE3B-207ENST00000537063 TSPOAP1O95153 1857 aa12.54□□□□□ -0.4
UBE3B-207ENST00000537063 CC2D1BQ5T0F9 858 aaKnown RBP12.54□□□□□ -0.4
UBE3B-207ENST00000537063 CYB5RLQ6IPT4 315 aa12.54□□□□□ -0.4
UBE3B-207ENST00000537063 PPP4R2Q9NY27 417 aa12.52□□□□□ -0.4
UBE3B-207ENST00000537063 ARHGEF40Q8TER5 1519 aa12.52□□□□□ -0.4
UBE3B-207ENST00000537063 KNSTRNQ9Y448 316 aa12.52□□□□□ -0.41
UBE3B-207ENST00000537063 CENPJQ9HC77 1338 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-207ENST00000537063 PPP2R1AP30153 589 aa12.51□□□□□ -0.41
UBE3B-207ENST00000537063 PDE3BQ13370 1112 aa12.51□□□□□ -0.41
UBE3B-207ENST00000537063 IRX6P78412 446 aaPredicted RBP12.51□□□□□ -0.41
UBE3B-207ENST00000537063 SPATA31D1Q6ZQQ2 1576 aa12.51□□□□□ -0.41
UBE3B-207ENST00000537063 SLC52A1Q9NWF4 448 aa12.5□□□□□ -0.41
UBE3B-207ENST00000537063 TULP4Q9NRJ4 1543 aa12.5□□□□□ -0.41
UBE3B-207ENST00000537063 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
UBE3B-207ENST00000537063 FAM69CQ0P6D2 419 aa12.49□□□□□ -0.41
UBE3B-207ENST00000537063 PPP6R1Q9UPN7 881 aa12.49□□□□□ -0.41
UBE3B-207ENST00000537063 PUS7Q96PZ0 661 aaKnown RBP12.49□□□□□ -0.41
UBE3B-207ENST00000537063 SETD1AO15047 1707 aaKnown RBP12.48□□□□□ -0.41
UBE3B-207ENST00000537063 VGFO15240 615 aaPredicted RBP12.48□□□□□ -0.41
UBE3B-207ENST00000537063 CHGAP10645 457 aaKnown RBP12.47□□□□□ -0.41
UBE3B-207ENST00000537063 IDI1Q13907 227 aa12.47□□□□□ -0.41
UBE3B-207ENST00000537063 SHPRHQ149N8 1683 aa12.47□□□□□ -0.41
UBE3B-207ENST00000537063 CARD14Q9BXL6 1004 aa12.47□□□□□ -0.41
UBE3B-207ENST00000537063 PTPRMP28827 1452 aa12.46□□□□□ -0.41
UBE3B-207ENST00000537063 ALKQ9UM73 1620 aa12.44□□□□□ -0.42
UBE3B-207ENST00000537063 TRAK1Q9UPV9 953 aa12.43□□□□□ -0.42
UBE3B-207ENST00000537063 ZNF521Q96K83 1311 aa12.43□□□□□ -0.42
UBE3B-207ENST00000537063 ADAMTS8Q9UP79 889 aa12.43□□□□□ -0.42
UBE3B-207ENST00000537063 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
UBE3B-207ENST00000537063 ANKRD26Q9UPS8 1709 aa12.42□□□□□ -0.42
UBE3B-207ENST00000537063 NSD3Q9BZ95 1437 aa12.42□□□□□ -0.42
UBE3B-207ENST00000537063 POLR3AO14802 1390 aaPredicted RBP12.42□□□□□ -0.42
UBE3B-207ENST00000537063 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
UBE3B-207ENST00000537063 A2ML1A8K2U0 1454 aa12.42□□□□□ -0.42
UBE3B-207ENST00000537063 NINLQ9Y2I6 1382 aa12.41□□□□□ -0.42
UBE3B-207ENST00000537063 NRXN3Q9Y4C0 1643 aa12.4□□□□□ -0.42
UBE3B-207ENST00000537063 PLEKHH1Q9ULM0 1364 aa12.4□□□□□ -0.42
UBE3B-207ENST00000537063 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
UBE3B-207ENST00000537063 ANKRD36BQ8N2N9 1353 aa12.4□□□□□ -0.42
UBE3B-207ENST00000537063 YTHDC2Q9H6S0 1430 aaKnown RBP12.4□□□□□ -0.43
UBE3B-207ENST00000537063 RCAN3Q9UKA8 241 aa12.39□□□□□ -0.43
UBE3B-207ENST00000537063 NSD2O96028 1365 aa12.39□□□□□ -0.43
UBE3B-207ENST00000537063 SENP3-EIF4A1A0A087X0R7 540 aa12.39□□□□□ -0.43
UBE3B-207ENST00000537063 EVC2Q86UK5 1308 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms