RNA–Protein interactions for RNA: ENST00000537002.5

PTPRD-213, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 8,224 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-213ENST00000537002 MPHOSPH9Q99550 1183 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 GTPBP4Q9BZE4 634 aaKnown RBP6.7□□□□□ -1.34
PTPRD-213ENST00000537002 MCM4P33991 863 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 IGF1RP08069 1367 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 KDM2BQ8NHM5 1336 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 GOLGA6L4A6NEF3 574 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 OFD1O75665 1012 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 GOLGA2Q08379 1002 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 GRPEL1Q9HAV7 217 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 TEX14Q8IWB6 1497 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 ANKRD30BQ9BXX2 1392 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 APBB1O00213 710 aa6.7□□□□□ -1.34
PTPRD-213ENST00000537002 PDE3AQ14432 1141 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 CDCA8Q53HL2 280 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 XRCC6P12956 609 aaKnown RBP eCLIP6.69□□□□□ -1.34
PTPRD-213ENST00000537002 NOL8Q76FK4 1167 aaKnown RBP6.69□□□□□ -1.34
PTPRD-213ENST00000537002 RRAGDQ9NQL2 400 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-213ENST00000537002 CUL7Q14999 1698 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 FAM193AP78312 1265 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 TMF1P82094 1093 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 FHOD3Q2V2M9 1422 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 SYAP1Q96A49 352 aaPredicted RBP6.69□□□□□ -1.34
PTPRD-213ENST00000537002 RAD54L2Q9Y4B4 1467 aa6.69□□□□□ -1.34
PTPRD-213ENST00000537002 KIF14Q15058 1648 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 TSPYL1Q9H0U9 437 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 CHMP4BQ9H444 224 aaKnown RBP6.68□□□□□ -1.34
PTPRD-213ENST00000537002 TAOK2Q9UL54 1235 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 BLMP54132 1417 aaPredicted RBP6.68□□□□□ -1.34
PTPRD-213ENST00000537002 LETM1O95202 739 aaPredicted RBP6.68□□□□□ -1.34
PTPRD-213ENST00000537002 RALGAPBQ86X10 1494 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 CREBRFQ8IUR6 639 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 FGD1P98174 961 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 KIAA1211Q6ZU35 1233 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 UHRF1BP1Q6BDS2 1440 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 PDE4CQ08493 712 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 EFCAB2Q5VUJ9 269 aa6.68□□□□□ -1.34
PTPRD-213ENST00000537002 TRAK2O60296 914 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 DNMBPQ6XZF7 1577 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 U2SURPO15042 1029 aaKnown RBP6.67□□□□□ -1.34
PTPRD-213ENST00000537002 NRDCO43847 1150 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 PARD3Q8TEW0 1356 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 KIF16BQ96L93 1317 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 C8orf34Q49A92 452 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 POGKQ9P215 609 aa6.67□□□□□ -1.34
PTPRD-213ENST00000537002 MCCP23508 829 aa6.66□□□□□ -1.34
PTPRD-213ENST00000537002 PRDM10Q9NQV6 1147 aa6.66□□□□□ -1.34
PTPRD-213ENST00000537002 POLA1P09884 1462 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-213ENST00000537002 SNAPC4Q5SXM2 1469 aa6.66□□□□□ -1.34
PTPRD-213ENST00000537002 MAGI1Q96QZ7 1491 aaPredicted RBP6.66□□□□□ -1.34
PTPRD-213ENST00000537002 COG6Q9Y2V7 657 aa6.66□□□□□ -1.34
PTPRD-213ENST00000537002 PDCL2Q8N4E4 241 aa6.66□□□□□ -1.34
PTPRD-213ENST00000537002 RBM25P49756 843 aaKnown RBP6.65□□□□□ -1.34
PTPRD-213ENST00000537002 UGGT2Q9NYU1 1516 aa6.65□□□□□ -1.34
PTPRD-213ENST00000537002 NASPP49321 788 aaPredicted RBP6.65□□□□□ -1.34
PTPRD-213ENST00000537002 CFDP1Q9UEE9 299 aaPredicted RBP6.65□□□□□ -1.34
PTPRD-213ENST00000537002 PRG4Q92954 1404 aaPredicted RBP6.65□□□□□ -1.34
PTPRD-213ENST00000537002 PRIMPOLQ96LW4 560 aa6.65□□□□□ -1.34
PTPRD-213ENST00000537002 VGFO15240 615 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-213ENST00000537002 PKD2Q13563 968 aa6.65□□□□□ -1.35
PTPRD-213ENST00000537002 FOXD4L6Q3SYB3 417 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-213ENST00000537002 FOXD4L3Q6VB84 417 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-213ENST00000537002 BCL11BQ9C0K0 894 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-213ENST00000537002 CCDC66A2RUB6 948 aa6.65□□□□□ -1.35
PTPRD-213ENST00000537002 MAPK8IP2Q13387 824 aaPredicted RBP6.65□□□□□ -1.35
PTPRD-213ENST00000537002 CCDC184Q52MB2 194 aa6.65□□□□□ -1.35
PTPRD-213ENST00000537002 PPP1R9BQ96SB3 815 aa6.65□□□□□ -1.35
PTPRD-213ENST00000537002 TAF7LQ5H9L4 462 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 SKAP1Q86WV1 359 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 SYNJ2O15056 1496 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 VIRMAQ69YN4 1812 aaKnown RBP6.64□□□□□ -1.35
PTPRD-213ENST00000537002 STAC3Q96MF2 364 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 ZNF592Q92610 1267 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 BCL2L13Q9BXK5 485 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 CCDC39Q9UFE4 941 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 CTTNBP2Q8WZ74 1663 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 CLASP1Q7Z460 1538 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 E9PSI1 815 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 TPM3P06753 285 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 ARHGEF11O15085 1522 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 UQCRHLA0A096LP55 91 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 ZNF500O60304 480 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-213ENST00000537002 UQCRHP07919 91 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 CCDC94Q9BW85 323 aaPredicted RBP6.64□□□□□ -1.35
PTPRD-213ENST00000537002 PRDM2Q13029 1718 aa6.64□□□□□ -1.35
PTPRD-213ENST00000537002 SASS6Q6UVJ0 657 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 MORC1Q86VD1 984 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 TBC1D32Q96NH3 1257 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 KIAA1107Q9UPP5 1409 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 SMC4Q9NTJ3 1288 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 KCNJ4P48050 445 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 NCBP3Q53F19 620 aaKnown RBP6.63□□□□□ -1.35
PTPRD-213ENST00000537002 MCTP1Q6DN14 999 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 NAP1L2Q9ULW6 460 aaPredicted RBP6.63□□□□□ -1.35
PTPRD-213ENST00000537002 MBD5Q9P267 1494 aa6.63□□□□□ -1.35
PTPRD-213ENST00000537002 PHF14O94880 888 aa6.62□□□□□ -1.35
PTPRD-213ENST00000537002 CDCA7LQ96GN5 454 aa6.62□□□□□ -1.35
PTPRD-213ENST00000537002 YEATS2Q9ULM3 1422 aa6.62□□□□□ -1.35
PTPRD-213ENST00000537002 SNX21Q969T3 373 aa6.62□□□□□ -1.35
PTPRD-213ENST00000537002 ANTXR1Q9H6X2 564 aa6.62□□□□□ -1.35
PTPRD-213ENST00000537002 RRP7AQ9Y3A4 280 aaKnown RBP6.62□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 1179.5 ms