RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 CCDC184Q52MB2 194 aa18.43■□□□□ 0.54
SMG6-203ENST00000536871 TMC1Q8TDI8 760 aa18.42■□□□□ 0.54
SMG6-203ENST00000536871 DISP3Q9P2K9 1392 aa18.41■□□□□ 0.54
SMG6-203ENST00000536871 GGT6Q6P531 493 aa18.41■□□□□ 0.54
SMG6-203ENST00000536871 PARD3Q8TEW0 1356 aa18.41■□□□□ 0.54
SMG6-203ENST00000536871 NOS1P29475 1434 aa18.4■□□□□ 0.54
SMG6-203ENST00000536871 RAPGEF3O95398 923 aa18.4■□□□□ 0.54
SMG6-203ENST00000536871 IFT172Q9UG01 1749 aa18.4■□□□□ 0.54
SMG6-203ENST00000536871 ERICH6BQ5W0A0 696 aa18.39■□□□□ 0.54
SMG6-203ENST00000536871 NLRP13Q86W25 1043 aa18.39■□□□□ 0.54
SMG6-203ENST00000536871 PER1O15534 1290 aaPredicted RBP18.39■□□□□ 0.53
SMG6-203ENST00000536871 PPP6R1Q9UPN7 881 aa18.39■□□□□ 0.53
SMG6-203ENST00000536871 INSRP06213 1382 aa18.39■□□□□ 0.53
SMG6-203ENST00000536871 DIP2BQ9P265 1576 aa18.39■□□□□ 0.53
SMG6-203ENST00000536871 SETBP1Q9Y6X0 1596 aa18.39■□□□□ 0.53
SMG6-203ENST00000536871 CAMSAP1Q5T5Y3 1602 aa18.39■□□□□ 0.53
SMG6-203ENST00000536871 PNISRQ8TF01 805 aaKnown RBP18.37■□□□□ 0.53
SMG6-203ENST00000536871 SBNO2Q9Y2G9 1366 aa18.37■□□□□ 0.53
SMG6-203ENST00000536871 REREQ9P2R6 1566 aa18.36■□□□□ 0.53
SMG6-203ENST00000536871 FKBP8Q14318 412 aa18.36■□□□□ 0.53
SMG6-203ENST00000536871 SYNMO15061 1565 aa18.36■□□□□ 0.53
SMG6-203ENST00000536871 UGGT1Q9NYU2 1555 aa18.36■□□□□ 0.53
SMG6-203ENST00000536871 FAM69CQ0P6D2 419 aa18.35■□□□□ 0.53
SMG6-203ENST00000536871 SLC52A1Q9NWF4 448 aa18.35■□□□□ 0.53
SMG6-203ENST00000536871 LRPPRCP42704 1394 aaKnown RBP18.35■□□□□ 0.53
SMG6-203ENST00000536871 PANK3Q9H999 370 aa18.33■□□□□ 0.53
SMG6-203ENST00000536871 PIK3C2BO00750 1634 aa18.33■□□□□ 0.52
SMG6-203ENST00000536871 NPC1L1Q9UHC9 1359 aa18.32■□□□□ 0.52
SMG6-203ENST00000536871 MROH2AA6NES4 1674 aa18.32■□□□□ 0.52
SMG6-203ENST00000536871 ADGRF5Q8IZF2 1346 aa18.32■□□□□ 0.52
SMG6-203ENST00000536871 PIK3C2GO75747 1445 aa18.32■□□□□ 0.52
SMG6-203ENST00000536871 AGLP35573 1532 aa18.31■□□□□ 0.52
SMG6-203ENST00000536871 MYO3AQ8NEV4 1616 aa18.31■□□□□ 0.52
SMG6-203ENST00000536871 VGFO15240 615 aaPredicted RBP18.31■□□□□ 0.52
SMG6-203ENST00000536871 C14orf93Q9H972 538 aaKnown RBP18.31■□□□□ 0.52
SMG6-203ENST00000536871 YEATS2Q9ULM3 1422 aa18.3■□□□□ 0.52
SMG6-203ENST00000536871 CFAP70Q5T0N1 1121 aa18.3■□□□□ 0.52
SMG6-203ENST00000536871 KNSTRNQ9Y448 316 aa18.3■□□□□ 0.52
SMG6-203ENST00000536871 ZFYVE9O95405 1425 aa18.3■□□□□ 0.52
SMG6-203ENST00000536871 PPLO60437 1756 aa18.29■□□□□ 0.52
SMG6-203ENST00000536871 SMG6Q86US8 1419 aaKnown RBP18.28■□□□□ 0.52
SMG6-203ENST00000536871 CHGAP10645 457 aaKnown RBP18.28■□□□□ 0.52
SMG6-203ENST00000536871 KDM5AP29375 1690 aaKnown RBP18.27■□□□□ 0.52
SMG6-203ENST00000536871 PUS7Q96PZ0 661 aaKnown RBP18.26■□□□□ 0.51
SMG6-203ENST00000536871 CENPJQ9HC77 1338 aaPredicted RBP18.24■□□□□ 0.51
SMG6-203ENST00000536871 ASXL1Q8IXJ9 1541 aa18.24■□□□□ 0.51
SMG6-203ENST00000536871 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
SMG6-203ENST00000536871 NUDCQ9Y266 331 aa18.23■□□□□ 0.51
SMG6-203ENST00000536871 ERVK-7P63135 1459 aa18.23■□□□□ 0.51
SMG6-203ENST00000536871 CNGB1Q14028 1251 aaPredicted RBP18.22■□□□□ 0.51
SMG6-203ENST00000536871 ADGRB1O14514 1584 aa18.22■□□□□ 0.51
SMG6-203ENST00000536871 NEXMIFQ5QGS0 1516 aa18.22■□□□□ 0.51
SMG6-203ENST00000536871 SIGLEC1Q9BZZ2 1709 aa18.21■□□□□ 0.51
SMG6-203ENST00000536871 CC2D1BQ5T0F9 858 aaKnown RBP18.2■□□□□ 0.5
SMG6-203ENST00000536871 AMER1Q5JTC6 1135 aaPredicted RBP18.2■□□□□ 0.5
SMG6-203ENST00000536871 PREX1Q8TCU6 1659 aa18.19■□□□□ 0.5
SMG6-203ENST00000536871 IDI1Q13907 227 aa18.18■□□□□ 0.5
SMG6-203ENST00000536871 MYOM1P52179 1685 aa18.18■□□□□ 0.5
SMG6-203ENST00000536871 BLMP54132 1417 aaPredicted RBP18.16■□□□□ 0.5
SMG6-203ENST00000536871 ARHGEF40Q8TER5 1519 aa18.15■□□□□ 0.5
SMG6-203ENST00000536871 TMEM131LA2VDJ0 1609 aa18.15■□□□□ 0.5
SMG6-203ENST00000536871 PPP4R2Q9NY27 417 aa18.14■□□□□ 0.49
SMG6-203ENST00000536871 PPP2R1AP30153 589 aa18.13■□□□□ 0.49
SMG6-203ENST00000536871 RNF123Q5XPI4 1314 aa18.13■□□□□ 0.49
SMG6-203ENST00000536871 BCANQ96GW7 911 aa18.12■□□□□ 0.49
SMG6-203ENST00000536871 NINLQ9Y2I6 1382 aa18.12■□□□□ 0.49
SMG6-203ENST00000536871 EVC2Q86UK5 1308 aa18.12■□□□□ 0.49
SMG6-203ENST00000536871 TRAK1Q9UPV9 953 aa18.12■□□□□ 0.49
SMG6-203ENST00000536871 CFAP65Q6ZU64 1925 aaKnown RBP18.11■□□□□ 0.49
SMG6-203ENST00000536871 QRICH2Q9H0J4 1663 aa18.11■□□□□ 0.49
SMG6-203ENST00000536871 SPATA31D1Q6ZQQ2 1576 aa18.11■□□□□ 0.49
SMG6-203ENST00000536871 TSPOAP1O95153 1857 aa18.11■□□□□ 0.49
SMG6-203ENST00000536871 WDR43Q15061 677 aaKnown RBP eCLIP18.09■□□□□ 0.49
SMG6-203ENST00000536871 ANP32EQ9BTT0 268 aa18.09■□□□□ 0.49
SMG6-203ENST00000536871 NGEFQ8N5V2 710 aa18.08■□□□□ 0.49
SMG6-203ENST00000536871 STAG3Q9UJ98 1225 aa18.07■□□□□ 0.48
SMG6-203ENST00000536871 KIF13AQ9H1H9 1805 aa18.07■□□□□ 0.48
SMG6-203ENST00000536871 USP32Q8NFA0 1604 aa18.07■□□□□ 0.48
SMG6-203ENST00000536871 NSD2O96028 1365 aa18.06■□□□□ 0.48
SMG6-203ENST00000536871 ARHGEF28Q8N1W1 1705 aaKnown RBP18.06■□□□□ 0.48
SMG6-203ENST00000536871 TMEM132EQ6IEE7 984 aa18.05■□□□□ 0.48
SMG6-203ENST00000536871 ESF1Q9H501 851 aaKnown RBP18.05■□□□□ 0.48
SMG6-203ENST00000536871 HDGFP51858 240 aaKnown RBP18.03■□□□□ 0.48
SMG6-203ENST00000536871 CLTCQ00610 1675 aaKnown RBP18.03■□□□□ 0.48
SMG6-203ENST00000536871 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.03■□□□□ 0.48
SMG6-203ENST00000536871 BCL11AQ9H165 835 aa18.03■□□□□ 0.48
SMG6-203ENST00000536871 ATAD2Q6PL18 1390 aa18.02■□□□□ 0.48
SMG6-203ENST00000536871 ANKRD36BQ8N2N9 1353 aa18.02■□□□□ 0.48
SMG6-203ENST00000536871 CGNL1Q0VF96 1302 aa18.02■□□□□ 0.48
SMG6-203ENST00000536871 CARD14Q9BXL6 1004 aa18.02■□□□□ 0.48
SMG6-203ENST00000536871 FBXO31Q5XUX0 539 aaPredicted RBP18.01■□□□□ 0.47
SMG6-203ENST00000536871 A2ML1A8K2U0 1454 aa18.01■□□□□ 0.47
SMG6-203ENST00000536871 YTHDC2Q9H6S0 1430 aaKnown RBP18.01■□□□□ 0.47
SMG6-203ENST00000536871 POLR3AO14802 1390 aaPredicted RBP18.01■□□□□ 0.47
SMG6-203ENST00000536871 NSD3Q9BZ95 1437 aa18■□□□□ 0.47
SMG6-203ENST00000536871 ADAMTS8Q9UP79 889 aa18■□□□□ 0.47
SMG6-203ENST00000536871 DLC1Q96QB1 1528 aa17.99■□□□□ 0.47
SMG6-203ENST00000536871 TULP4Q9NRJ4 1543 aa17.99■□□□□ 0.47
SMG6-203ENST00000536871 TSHZ2Q9NRE2 1034 aa17.99■□□□□ 0.47
SMG6-203ENST00000536871 ALKQ9UM73 1620 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 80.2 ms