RNA–Protein interactions for RNA: ENST00000536603.5

CCDC61-201, Transcript of coiled-coil domain containing 61, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC61, Length 1,282 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC61-201ENST00000536603 HFM1A2PYH4 1435 aa27■■□□□ 1.91
CCDC61-201ENST00000536603 RBM33Q96EV2 1170 aaKnown RBP26.99■■□□□ 1.91
CCDC61-201ENST00000536603 ADGRB3O60242 1522 aa26.98■■□□□ 1.91
CCDC61-201ENST00000536603 FAM135BQ49AJ0 1406 aa26.98■■□□□ 1.91
CCDC61-201ENST00000536603 SLC52A1Q9NWF4 448 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 GCC2Q8IWJ2 1684 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 NOS1P29475 1434 aa26.97■■□□□ 1.91
CCDC61-201ENST00000536603 TET3O43151 1660 aa26.96■■□□□ 1.91
CCDC61-201ENST00000536603 ROBO1Q9Y6N7 1651 aa26.94■■□□□ 1.9
CCDC61-201ENST00000536603 IQGAP3Q86VI3 1631 aa26.93■■□□□ 1.9
CCDC61-201ENST00000536603 PPP1R15AO75807 674 aaPredicted RBP26.92■■□□□ 1.9
CCDC61-201ENST00000536603 RGS17Q9UGC6 210 aaPredicted RBP26.91■■□□□ 1.9
CCDC61-201ENST00000536603 NKTRP30414 1462 aaKnown RBP26.9■■□□□ 1.9
CCDC61-201ENST00000536603 TRIM52Q96A61 297 aa26.9■■□□□ 1.9
CCDC61-201ENST00000536603 RPRD2Q5VT52 1461 aaKnown RBP26.89■■□□□ 1.9
CCDC61-201ENST00000536603 MSH6P52701 1360 aa26.89■■□□□ 1.9
CCDC61-201ENST00000536603 MYO5BQ9ULV0 1848 aa26.89■■□□□ 1.9
CCDC61-201ENST00000536603 HDGFP51858 240 aaKnown RBP26.89■■□□□ 1.9
CCDC61-201ENST00000536603 NWD1Q149M9 1564 aa26.88■■□□□ 1.89
CCDC61-201ENST00000536603 CHGAP10645 457 aaKnown RBP26.86■■□□□ 1.89
CCDC61-201ENST00000536603 E9PCH4 1651 aa26.84■■□□□ 1.89
CCDC61-201ENST00000536603 RIMS2Q9UQ26 1411 aa26.83■■□□□ 1.89
CCDC61-201ENST00000536603 SLAIN2Q9P270 581 aa26.83■■□□□ 1.89
CCDC61-201ENST00000536603 PLEKHG1Q9ULL1 1385 aa26.83■■□□□ 1.88
CCDC61-201ENST00000536603 CHD2O14647 1828 aaKnown RBP26.81■■□□□ 1.88
CCDC61-201ENST00000536603 PHLPP1O60346 1717 aa26.81■■□□□ 1.88
CCDC61-201ENST00000536603 ZFYVE9O95405 1425 aa26.81■■□□□ 1.88
CCDC61-201ENST00000536603 C14orf37Q86TY3 774 aa26.8■■□□□ 1.88
CCDC61-201ENST00000536603 SETD5Q9C0A6 1442 aa26.8■■□□□ 1.88
CCDC61-201ENST00000536603 TMEM131LA2VDJ0 1609 aa26.79■■□□□ 1.88
CCDC61-201ENST00000536603 POTEAQ6S8J7 498 aa26.79■■□□□ 1.88
CCDC61-201ENST00000536603 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.78■■□□□ 1.88
CCDC61-201ENST00000536603 SLC4A1APQ9BWU0 796 aaKnown RBP26.77■■□□□ 1.88
CCDC61-201ENST00000536603 NUTM2DQ5VT03 806 aaPredicted RBP26.76■■□□□ 1.87
CCDC61-201ENST00000536603 TBX22Q9Y458 520 aa26.75■■□□□ 1.87
CCDC61-201ENST00000536603 JCADQ9P266 1359 aa26.72■■□□□ 1.87
CCDC61-201ENST00000536603 RAB3GAP2Q9H2M9 1393 aa26.71■■□□□ 1.87
CCDC61-201ENST00000536603 ACIN1Q9UKV3 1341 aaKnown RBP26.68■■□□□ 1.86
CCDC61-201ENST00000536603 MPHOSPH9Q99550 1183 aa26.68■■□□□ 1.86
CCDC61-201ENST00000536603 NCOA3Q9Y6Q9 1424 aa26.67■■□□□ 1.86
CCDC61-201ENST00000536603 ATF3P18847 181 aa26.67■■□□□ 1.86
CCDC61-201ENST00000536603 SPHKAPQ2M3C7 1700 aa26.66■■□□□ 1.86
CCDC61-201ENST00000536603 DIP2AQ14689 1571 aa26.66■■□□□ 1.86
CCDC61-201ENST00000536603 FOXD1Q16676 465 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 MEX3CQ5U5Q3 659 aaKnown RBP26.65■■□□□ 1.86
CCDC61-201ENST00000536603 CADPS2Q86UW7 1296 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.65■■□□□ 1.86
CCDC61-201ENST00000536603 ADAMTS13Q76LX8 1427 aa26.65■■□□□ 1.86
CCDC61-201ENST00000536603 C19orf44Q9H6X5 657 aa26.64■■□□□ 1.86
CCDC61-201ENST00000536603 COL16A1Q07092 1604 aaPredicted RBP26.64■■□□□ 1.85
CCDC61-201ENST00000536603 PIK3R4Q99570 1358 aa26.62■■□□□ 1.85
CCDC61-201ENST00000536603 TRPM2O94759 1503 aa26.62■■□□□ 1.85
CCDC61-201ENST00000536603 SETD1AO15047 1707 aaKnown RBP26.6■■□□□ 1.85
CCDC61-201ENST00000536603 AMOTL2Q9Y2J4 779 aa26.6■■□□□ 1.85
CCDC61-201ENST00000536603 HRCP23327 699 aa26.59■■□□□ 1.85
CCDC61-201ENST00000536603 SPATA31A6Q5VVP1 1343 aa26.59■■□□□ 1.85
CCDC61-201ENST00000536603 ZNF326Q5BKZ1 582 aaKnown RBP26.56■■□□□ 1.84
CCDC61-201ENST00000536603 CLTCL1P53675 1640 aa26.55■■□□□ 1.84
CCDC61-201ENST00000536603 AHDC1Q5TGY3 1603 aaPredicted RBP26.54■■□□□ 1.84
CCDC61-201ENST00000536603 LRP6O75581 1613 aa26.54■■□□□ 1.84
CCDC61-201ENST00000536603 ZNF772Q68DY9 489 aaPredicted RBP26.53■■□□□ 1.84
CCDC61-201ENST00000536603 SHPRHQ149N8 1683 aa26.52■■□□□ 1.84
CCDC61-201ENST00000536603 PTPRUQ92729 1446 aa26.52■■□□□ 1.84
CCDC61-201ENST00000536603 NUTM2BA6NNL0 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 NUTM2EB1AL46 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 BRINP3Q76B58 766 aa26.5■■□□□ 1.83
CCDC61-201ENST00000536603 NUTM2AQ8IVF1 878 aaPredicted RBP26.5■■□□□ 1.83
CCDC61-201ENST00000536603 KIF1BO60333 1816 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 TRIM26Q12899 539 aaPredicted RBP26.46■■□□□ 1.83
CCDC61-201ENST00000536603 DCCP43146 1447 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 NRXN3Q9Y4C0 1643 aa26.46■■□□□ 1.83
CCDC61-201ENST00000536603 XRN1Q8IZH2 1706 aaKnown RBP26.45■■□□□ 1.83
CCDC61-201ENST00000536603 CCDC144AA2RUR9 1427 aa26.45■■□□□ 1.82
CCDC61-201ENST00000536603 SETBP1Q9Y6X0 1596 aa26.45■■□□□ 1.82
CCDC61-201ENST00000536603 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
CCDC61-201ENST00000536603 RXRBP28702 533 aa26.41■■□□□ 1.82
CCDC61-201ENST00000536603 METP08581 1390 aa26.41■■□□□ 1.82
CCDC61-201ENST00000536603 MST1RQ04912 1400 aa26.39■■□□□ 1.81
CCDC61-201ENST00000536603 LRRC59Q96AG4 307 aaKnown RBP26.38■■□□□ 1.81
CCDC61-201ENST00000536603 RGL3Q3MIN7 710 aa26.37■■□□□ 1.81
CCDC61-201ENST00000536603 NHSL1Q5SYE7 1610 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 NEXMIFQ5QGS0 1516 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 UPF1Q92900 1129 aaKnown RBP eCLIP26.36■■□□□ 1.81
CCDC61-201ENST00000536603 AFF2P51816 1311 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 RPGRIP1LQ68CZ1 1315 aa26.36■■□□□ 1.81
CCDC61-201ENST00000536603 ANKRD30BQ9BXX2 1392 aa26.35■■□□□ 1.81
CCDC61-201ENST00000536603 ADGRL3Q9HAR2 1447 aa26.34■■□□□ 1.81
CCDC61-201ENST00000536603 VGFO15240 615 aaPredicted RBP26.33■■□□□ 1.81
CCDC61-201ENST00000536603 DDX17Q92841 729 aaKnown RBP26.33■■□□□ 1.81
CCDC61-201ENST00000536603 NALCNQ8IZF0 1738 aa26.33■■□□□ 1.81
CCDC61-201ENST00000536603 SPATA31E1Q6ZUB1 1445 aa26.32■■□□□ 1.8
CCDC61-201ENST00000536603 C8orf37Q96NL8 207 aa26.31■■□□□ 1.8
CCDC61-201ENST00000536603 CDK12Q9NYV4 1490 aaPredicted RBP26.26■■□□□ 1.79
CCDC61-201ENST00000536603 PNPLA6Q8IY17 1366 aa26.26■■□□□ 1.79
CCDC61-201ENST00000536603 QTRT2Q9H974 415 aaKnown RBP26.25■■□□□ 1.79
CCDC61-201ENST00000536603 PPLO60437 1756 aa26.25■■□□□ 1.79
CCDC61-201ENST00000536603 C1orf167Q5SNV9 1468 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 ADAMTS2O95450 1211 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 NGLY1Q96IV0 654 aa26.23■■□□□ 1.79
CCDC61-201ENST00000536603 PCGF6Q9BYE7 350 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms