RNA–Protein interactions for RNA: ENST00000536337.5

PTPN21-202, Transcript of protein tyrosine phosphatase, non-receptor type 21, humanhuman

TSL 1 (best)

Gene PTPN21, Length 3,943 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN21-202ENST00000536337 ZBTB7CA1YPR0 619 aa16.43■□□□□ 0.22
PTPN21-202ENST00000536337 PLEKHH2Q8IVE3 1493 aa16.43■□□□□ 0.22
PTPN21-202ENST00000536337 PER1O15534 1290 aaPredicted RBP16.42■□□□□ 0.22
PTPN21-202ENST00000536337 HSP90AB1P08238 724 aaKnown RBP16.42■□□□□ 0.22
PTPN21-202ENST00000536337 WDR62O43379 1518 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 TESK2Q96S53 571 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 BRPF3Q9ULD4 1205 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 ATP10BO94823 1461 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 DUSP27Q5VZP5 1158 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 SPATA31E1Q6ZUB1 1445 aa16.41■□□□□ 0.22
PTPN21-202ENST00000536337 TSR2Q969E8 191 aaKnown RBP16.4■□□□□ 0.22
PTPN21-202ENST00000536337 SLFN5Q08AF3 891 aa16.4■□□□□ 0.22
PTPN21-202ENST00000536337 SCAPERQ9BY12 1400 aa16.4■□□□□ 0.22
PTPN21-202ENST00000536337 ANP32BQ92688 251 aaKnown RBP16.4■□□□□ 0.22
PTPN21-202ENST00000536337 RUNDC1Q96C34 613 aa16.4■□□□□ 0.22
PTPN21-202ENST00000536337 HSCBQ8IWL3 235 aa16.39■□□□□ 0.22
PTPN21-202ENST00000536337 PRKCSHP14314 528 aaPredicted RBP16.39■□□□□ 0.21
PTPN21-202ENST00000536337 HDGFL2Q7Z4V5 671 aaPredicted RBP16.39■□□□□ 0.21
PTPN21-202ENST00000536337 SAMD9Q5K651 1589 aa16.39■□□□□ 0.21
PTPN21-202ENST00000536337 CCDC141Q6ZP82 1450 aa16.39■□□□□ 0.21
PTPN21-202ENST00000536337 ZKSCAN2Q63HK3 967 aa16.38■□□□□ 0.21
PTPN21-202ENST00000536337 DISP1Q96F81 1524 aa16.37■□□□□ 0.21
PTPN21-202ENST00000536337 RAPGEF6Q8TEU7 1601 aa16.37■□□□□ 0.21
PTPN21-202ENST00000536337 ADGRF5Q8IZF2 1346 aa16.37■□□□□ 0.21
PTPN21-202ENST00000536337 IPO8O15397 1037 aaKnown RBP16.36■□□□□ 0.21
PTPN21-202ENST00000536337 RIPK4P57078 832 aa16.36■□□□□ 0.21
PTPN21-202ENST00000536337 TERF2IPQ9NYB0 399 aa16.36■□□□□ 0.21
PTPN21-202ENST00000536337 EVC2Q86UK5 1308 aa16.35■□□□□ 0.21
PTPN21-202ENST00000536337 DENND4BO75064 1496 aaPredicted RBP16.35■□□□□ 0.21
PTPN21-202ENST00000536337 WWC1Q8IX03 1113 aa16.35■□□□□ 0.21
PTPN21-202ENST00000536337 DZIP1LQ8IYY4 767 aaKnown RBP16.35■□□□□ 0.21
PTPN21-202ENST00000536337 VGFO15240 615 aaPredicted RBP16.34■□□□□ 0.21
PTPN21-202ENST00000536337 HMOX1P09601 288 aa16.34■□□□□ 0.21
PTPN21-202ENST00000536337 TRIM44Q96DX7 344 aaPredicted RBP16.34■□□□□ 0.21
PTPN21-202ENST00000536337 KIF21AQ7Z4S6 1674 aa16.34■□□□□ 0.21
PTPN21-202ENST00000536337 ABCA5Q8WWZ7 1642 aa16.34■□□□□ 0.21
PTPN21-202ENST00000536337 RALGAPBQ86X10 1494 aa16.34■□□□□ 0.21
PTPN21-202ENST00000536337 SPINK5Q9NQ38 1064 aaPredicted RBP16.34■□□□□ 0.21
PTPN21-202ENST00000536337 LNPKQ9C0E8 428 aa16.33■□□□□ 0.21
PTPN21-202ENST00000536337 AMER1Q5JTC6 1135 aaPredicted RBP16.33■□□□□ 0.2
PTPN21-202ENST00000536337 PDZRN3Q9UPQ7 1066 aa16.33■□□□□ 0.2
PTPN21-202ENST00000536337 ANKRD45Q5TZF3 282 aa16.33■□□□□ 0.2
PTPN21-202ENST00000536337 EXOSC9Q06265 439 aaKnown RBP16.32■□□□□ 0.2
PTPN21-202ENST00000536337 PARD3Q8TEW0 1356 aa16.32■□□□□ 0.2
PTPN21-202ENST00000536337 IGHDP01880 384 aa16.31■□□□□ 0.2
PTPN21-202ENST00000536337 NAP1L5Q96NT1 182 aaPredicted RBP16.31■□□□□ 0.2
PTPN21-202ENST00000536337 KIAA0556O60303 1618 aa16.31■□□□□ 0.2
PTPN21-202ENST00000536337 ADAMTS12P58397 1594 aa16.31■□□□□ 0.2
PTPN21-202ENST00000536337 PNNQ9H307 717 aaKnown RBP16.31■□□□□ 0.2
PTPN21-202ENST00000536337 PRAG1Q86YV5 1406 aa16.31■□□□□ 0.2
PTPN21-202ENST00000536337 KIF14Q15058 1648 aa16.3■□□□□ 0.2
PTPN21-202ENST00000536337 RAPGEF3O95398 923 aa16.3■□□□□ 0.2
PTPN21-202ENST00000536337 PLEKHH1Q9ULM0 1364 aa16.29■□□□□ 0.2
PTPN21-202ENST00000536337 DNMT1P26358 1616 aaKnown RBP16.29■□□□□ 0.2
PTPN21-202ENST00000536337 GOLGA6L22H0YM25 854 aa16.29■□□□□ 0.2
PTPN21-202ENST00000536337 RNF123Q5XPI4 1314 aa16.29■□□□□ 0.2
PTPN21-202ENST00000536337 ANO8Q9HCE9 1232 aaPredicted RBP16.28■□□□□ 0.2
PTPN21-202ENST00000536337 PDE3AQ14432 1141 aa16.28■□□□□ 0.2
PTPN21-202ENST00000536337 LRPPRCP42704 1394 aaKnown RBP16.27■□□□□ 0.2
PTPN21-202ENST00000536337 DIAPH1O60610 1272 aaKnown RBP16.27■□□□□ 0.2
PTPN21-202ENST00000536337 TNNQ9UQP3 1299 aa16.27■□□□□ 0.2
PTPN21-202ENST00000536337 STAC3Q96MF2 364 aa16.27■□□□□ 0.2
PTPN21-202ENST00000536337 SLC4A10Q6U841 1118 aa16.26■□□□□ 0.19
PTPN21-202ENST00000536337 C1orf115Q9H7X2 142 aa16.26■□□□□ 0.19
PTPN21-202ENST00000536337 DMRT2Q9Y5R5 561 aa16.26■□□□□ 0.19
PTPN21-202ENST00000536337 FBLN1P23142 703 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 FAM135AQ9P2D6 1515 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 CYB5RLQ6IPT4 315 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 CARD14Q9BXL6 1004 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 C22orf23Q9BZE7 217 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 GOLGA6L3A6NEY3 463 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 DDX19BQ9UMR2 479 aa16.24■□□□□ 0.19
PTPN21-202ENST00000536337 RARSP54136 660 aaKnown RBP16.23■□□□□ 0.19
PTPN21-202ENST00000536337 L1TD1Q5T7N2 865 aaKnown RBP16.23■□□□□ 0.19
PTPN21-202ENST00000536337 KDM5BQ9UGL1 1544 aa16.23■□□□□ 0.19
PTPN21-202ENST00000536337 NSD3Q9BZ95 1437 aa16.23■□□□□ 0.19
PTPN21-202ENST00000536337 NOB1Q9ULX3 412 aaKnown RBP16.23■□□□□ 0.19
PTPN21-202ENST00000536337 NGEFQ8N5V2 710 aa16.23■□□□□ 0.19
PTPN21-202ENST00000536337 FOXD4L5Q5VV16 416 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-202ENST00000536337 FOXD4L4Q8WXT5 416 aaPredicted RBP16.22■□□□□ 0.19
PTPN21-202ENST00000536337 THUMPD2Q9BTF0 503 aaKnown RBP16.22■□□□□ 0.19
PTPN21-202ENST00000536337 SYCP2Q9BX26 1530 aa16.22■□□□□ 0.19
PTPN21-202ENST00000536337 GCC2Q8IWJ2 1684 aa16.22■□□□□ 0.19
PTPN21-202ENST00000536337 LMOD2Q6P5Q4 547 aa16.21■□□□□ 0.19
PTPN21-202ENST00000536337 NOL8Q76FK4 1167 aaKnown RBP16.21■□□□□ 0.19
PTPN21-202ENST00000536337 CASC1Q6TDU7 716 aa16.21■□□□□ 0.18
PTPN21-202ENST00000536337 CABP1Q9NZU7 370 aa16.21■□□□□ 0.18
PTPN21-202ENST00000536337 PRKAR2BP31323 418 aa16.2■□□□□ 0.18
PTPN21-202ENST00000536337 CHMP4BQ9H444 224 aaKnown RBP16.2■□□□□ 0.18
PTPN21-202ENST00000536337 TARBP1Q13395 1621 aaKnown RBP16.2■□□□□ 0.18
PTPN21-202ENST00000536337 UHRF1BP1Q6BDS2 1440 aa16.19■□□□□ 0.18
PTPN21-202ENST00000536337 SEC24BO95487 1268 aa16.19■□□□□ 0.18
PTPN21-202ENST00000536337 C8orf34Q49A92 452 aa16.19■□□□□ 0.18
PTPN21-202ENST00000536337 PCDHB15Q9Y5E8 787 aa16.19■□□□□ 0.18
PTPN21-202ENST00000536337 TRAPPC8Q9Y2L5 1435 aa16.18■□□□□ 0.18
PTPN21-202ENST00000536337 NECTIN2Q92692 538 aa16.18■□□□□ 0.18
PTPN21-202ENST00000536337 A2MP01023 1474 aa16.18■□□□□ 0.18
PTPN21-202ENST00000536337 LTV1Q96GA3 475 aaPredicted RBP16.17■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms