RNA–Protein interactions for RNA: ENST00000536241.1

CDCA3-206, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 1,490 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-206ENST00000536241 MYO3AQ8NEV4 1616 aa16.45■□□□□ 0.22
CDCA3-206ENST00000536241 UHRF1BP1Q6BDS2 1440 aa16.44■□□□□ 0.22
CDCA3-206ENST00000536241 UBR1Q8IWV7 1749 aa16.44■□□□□ 0.22
CDCA3-206ENST00000536241 RIMS2Q9UQ26 1411 aa16.44■□□□□ 0.22
CDCA3-206ENST00000536241 TXNDC2Q86VQ3 553 aa16.43■□□□□ 0.22
CDCA3-206ENST00000536241 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.43■□□□□ 0.22
CDCA3-206ENST00000536241 TMEM2Q9UHN6 1383 aa16.43■□□□□ 0.22
CDCA3-206ENST00000536241 LTKP29376 864 aa16.42■□□□□ 0.22
CDCA3-206ENST00000536241 CEP170BQ9Y4F5 1589 aaPredicted RBP16.42■□□□□ 0.22
CDCA3-206ENST00000536241 NEXMIFQ5QGS0 1516 aa16.42■□□□□ 0.22
CDCA3-206ENST00000536241 PRAG1Q86YV5 1406 aa16.41■□□□□ 0.22
CDCA3-206ENST00000536241 PPLO60437 1756 aa16.41■□□□□ 0.22
CDCA3-206ENST00000536241 KDM5AP29375 1690 aaKnown RBP16.41■□□□□ 0.22
CDCA3-206ENST00000536241 EID1Q9Y6B2 187 aa16.41■□□□□ 0.22
CDCA3-206ENST00000536241 NBPF1Q3BBV0 1214 aa16.4■□□□□ 0.22
CDCA3-206ENST00000536241 CFAP70Q5T0N1 1121 aa16.4■□□□□ 0.22
CDCA3-206ENST00000536241 ZFYVE9O95405 1425 aa16.4■□□□□ 0.22
CDCA3-206ENST00000536241 IFT172Q9UG01 1749 aa16.39■□□□□ 0.22
CDCA3-206ENST00000536241 MYOM2P54296 1465 aa16.39■□□□□ 0.21
CDCA3-206ENST00000536241 ANKLE2Q86XL3 938 aa16.38■□□□□ 0.21
CDCA3-206ENST00000536241 BCANQ96GW7 911 aa16.38■□□□□ 0.21
CDCA3-206ENST00000536241 C14orf93Q9H972 538 aaKnown RBP16.38■□□□□ 0.21
CDCA3-206ENST00000536241 HSPA2P54652 639 aa16.37■□□□□ 0.21
CDCA3-206ENST00000536241 ZNF142P52746 1687 aaPredicted RBP16.36■□□□□ 0.21
CDCA3-206ENST00000536241 ARHGAP23Q9P227 1491 aa16.36■□□□□ 0.21
CDCA3-206ENST00000536241 NRXN1Q9ULB1 1477 aa16.36■□□□□ 0.21
CDCA3-206ENST00000536241 SLIT1O75093 1534 aa16.36■□□□□ 0.21
CDCA3-206ENST00000536241 PIK3C2GO75747 1445 aa16.34■□□□□ 0.21
CDCA3-206ENST00000536241 TMEM132EQ6IEE7 984 aa16.34■□□□□ 0.21
CDCA3-206ENST00000536241 CARD11Q9BXL7 1154 aa16.34■□□□□ 0.21
CDCA3-206ENST00000536241 NCKAP5LQ9HCH0 1330 aa16.34■□□□□ 0.21
CDCA3-206ENST00000536241 ROCK2O75116 1388 aaKnown RBP16.34■□□□□ 0.21
CDCA3-206ENST00000536241 SLC26A8Q96RN1 970 aa16.31■□□□□ 0.2
CDCA3-206ENST00000536241 SCAF11Q99590 1463 aaKnown RBP16.31■□□□□ 0.2
CDCA3-206ENST00000536241 PLEKHG1Q9ULL1 1385 aa16.31■□□□□ 0.2
CDCA3-206ENST00000536241 TRPM1Q7Z4N2 1603 aa16.3■□□□□ 0.2
CDCA3-206ENST00000536241 RALGAPBQ86X10 1494 aa16.3■□□□□ 0.2
CDCA3-206ENST00000536241 LMTK3Q96Q04 1460 aa16.3■□□□□ 0.2
CDCA3-206ENST00000536241 HIRIP3Q9BW71 556 aaPredicted RBP16.29■□□□□ 0.2
CDCA3-206ENST00000536241 ALKQ9UM73 1620 aa16.28■□□□□ 0.2
CDCA3-206ENST00000536241 EIF4G2P78344 907 aaKnown RBP eCLIP16.28■□□□□ 0.2
CDCA3-206ENST00000536241 GPRASP1Q5JY77 1395 aa16.27■□□□□ 0.2
CDCA3-206ENST00000536241 HSPA5P11021 654 aaKnown RBP16.27■□□□□ 0.19
CDCA3-206ENST00000536241 STK26Q9P289 416 aa16.27■□□□□ 0.19
CDCA3-206ENST00000536241 TBX22Q9Y458 520 aa16.27■□□□□ 0.19
CDCA3-206ENST00000536241 ADAMTS13Q76LX8 1427 aa16.27■□□□□ 0.19
CDCA3-206ENST00000536241 KIAA1210Q9ULL0 1709 aa16.26■□□□□ 0.19
CDCA3-206ENST00000536241 TRAK1Q9UPV9 953 aa16.26■□□□□ 0.19
CDCA3-206ENST00000536241 METP08581 1390 aa16.26■□□□□ 0.19
CDCA3-206ENST00000536241 AEBP2Q6ZN18 517 aaPredicted RBP16.25■□□□□ 0.19
CDCA3-206ENST00000536241 NRXN3Q9Y4C0 1643 aa16.24■□□□□ 0.19
CDCA3-206ENST00000536241 SETBP1Q9Y6X0 1596 aa16.24■□□□□ 0.19
CDCA3-206ENST00000536241 NPHP4O75161 1426 aaPredicted RBP16.23■□□□□ 0.19
CDCA3-206ENST00000536241 IQGAP1P46940 1657 aa16.23■□□□□ 0.19
CDCA3-206ENST00000536241 USP47Q96K76 1375 aa16.23■□□□□ 0.19
CDCA3-206ENST00000536241 MED14O60244 1454 aa16.23■□□□□ 0.19
CDCA3-206ENST00000536241 ADGRB1O14514 1584 aa16.23■□□□□ 0.19
CDCA3-206ENST00000536241 ST20-MTHFSA0A0A6YYL1 179 aa16.22■□□□□ 0.19
CDCA3-206ENST00000536241 LAMC1P11047 1609 aa16.2■□□□□ 0.18
CDCA3-206ENST00000536241 ZNF316A6NFI3 1004 aaPredicted RBP16.2■□□□□ 0.18
CDCA3-206ENST00000536241 AMOTL2Q9Y2J4 779 aa16.2■□□□□ 0.18
CDCA3-206ENST00000536241 ASXL1Q8IXJ9 1541 aa16.2■□□□□ 0.18
CDCA3-206ENST00000536241 YTHDC2Q9H6S0 1430 aaKnown RBP16.2■□□□□ 0.18
CDCA3-206ENST00000536241 SETD1AO15047 1707 aaKnown RBP16.19■□□□□ 0.18
CDCA3-206ENST00000536241 POLR1AO95602 1720 aaPredicted RBP16.19■□□□□ 0.18
CDCA3-206ENST00000536241 LRPPRCP42704 1394 aaKnown RBP16.18■□□□□ 0.18
CDCA3-206ENST00000536241 ABCC11Q96J66 1382 aa16.18■□□□□ 0.18
CDCA3-206ENST00000536241 PTPRUQ92729 1446 aa16.17■□□□□ 0.18
CDCA3-206ENST00000536241 STRCQ7RTU9 1775 aa16.17■□□□□ 0.18
CDCA3-206ENST00000536241 WAPLQ7Z5K2 1190 aa16.16■□□□□ 0.18
CDCA3-206ENST00000536241 SAFB2Q14151 953 aaKnown RBP eCLIP16.16■□□□□ 0.18
CDCA3-206ENST00000536241 PRAM1Q96QH2 718 aa16.16■□□□□ 0.18
CDCA3-206ENST00000536241 POGKQ9P215 609 aa16.16■□□□□ 0.18
CDCA3-206ENST00000536241 DIP2AQ14689 1571 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 EIF3AQ14152 1382 aaKnown RBP16.14■□□□□ 0.17
CDCA3-206ENST00000536241 PIK3R4Q99570 1358 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 C11orf95C9JLR9 678 aaPredicted RBP16.14■□□□□ 0.17
CDCA3-206ENST00000536241 KCNA6P17658 529 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 SIRT1Q96EB6 747 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 TESK2Q96S53 571 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 DMRT2Q9Y5R5 561 aa16.14■□□□□ 0.17
CDCA3-206ENST00000536241 CENPJQ9HC77 1338 aaPredicted RBP16.14■□□□□ 0.17
CDCA3-206ENST00000536241 ROBO2Q9HCK4 1378 aa16.11■□□□□ 0.17
CDCA3-206ENST00000536241 PLEKHH1Q9ULM0 1364 aa16.11■□□□□ 0.17
CDCA3-206ENST00000536241 TECPR2O15040 1411 aa16.09■□□□□ 0.17
CDCA3-206ENST00000536241 CHD2O14647 1828 aaKnown RBP16.09■□□□□ 0.17
CDCA3-206ENST00000536241 DLC1Q96QB1 1528 aa16.09■□□□□ 0.17
CDCA3-206ENST00000536241 MINK1Q8N4C8 1332 aaPredicted RBP16.09■□□□□ 0.17
CDCA3-206ENST00000536241 TMF1P82094 1093 aa16.09■□□□□ 0.17
CDCA3-206ENST00000536241 RBM33Q96EV2 1170 aaKnown RBP16.09■□□□□ 0.17
CDCA3-206ENST00000536241 ARHGEF28Q8N1W1 1705 aaKnown RBP16.08■□□□□ 0.16
CDCA3-206ENST00000536241 FAM135BQ49AJ0 1406 aa16.08■□□□□ 0.16
CDCA3-206ENST00000536241 SLC24A1O60721 1099 aa16.07■□□□□ 0.16
CDCA3-206ENST00000536241 PROSER2Q86WR7 435 aaPredicted RBP16.07■□□□□ 0.16
CDCA3-206ENST00000536241 POLR3GLQ9BT43 218 aa16.07■□□□□ 0.16
CDCA3-206ENST00000536241 WASHC2AQ641Q2 1341 aa16.05■□□□□ 0.16
CDCA3-206ENST00000536241 ZNF335Q9H4Z2 1342 aaPredicted RBP16.05■□□□□ 0.16
CDCA3-206ENST00000536241 KNDC1Q76NI1 1749 aa16.05■□□□□ 0.16
CDCA3-206ENST00000536241 DISP3Q9P2K9 1392 aa16.05■□□□□ 0.16
CDCA3-206ENST00000536241 KIF7Q2M1P5 1343 aa16.05■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms