RNA–Protein interactions for RNA: ENST00000536107.5

YBX3-205, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 438 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-205ENST00000536107 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
YBX3-205ENST00000536107 GRXCR2A6NFK2 248 aa9.28□□□□□ -0.92
YBX3-205ENST00000536107 FAM187AA6NFU0 413 aa9.28□□□□□ -0.92
YBX3-205ENST00000536107 GDF9O60383 454 aa9.28□□□□□ -0.92
YBX3-205ENST00000536107 ZNF697Q5TEC3 545 aa9.27□□□□□ -0.93
YBX3-205ENST00000536107 OSBPP22059 807 aa9.26□□□□□ -0.93
YBX3-205ENST00000536107 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
YBX3-205ENST00000536107 ARIH1Q9Y4X5 557 aaPredicted RBP9.26□□□□□ -0.93
YBX3-205ENST00000536107 LIAT1Q6ZQX7 453 aa9.25□□□□□ -0.93
YBX3-205ENST00000536107 AAASQ9NRG9 546 aa9.25□□□□□ -0.93
YBX3-205ENST00000536107 PADI6Q6TGC4 694 aa9.24□□□□□ -0.93
YBX3-205ENST00000536107 TNFRSF10AO00220 468 aa9.23□□□□□ -0.93
YBX3-205ENST00000536107 EYA1Q99502 592 aa9.23□□□□□ -0.93
YBX3-205ENST00000536107 ST8SIA5O15466 376 aa9.22□□□□□ -0.93
YBX3-205ENST00000536107 TLL1O43897 1013 aa9.22□□□□□ -0.93
YBX3-205ENST00000536107 PPEF1O14829 653 aaPredicted RBP9.21□□□□□ -0.94
YBX3-205ENST00000536107 S1PR4O95977 384 aa9.21□□□□□ -0.94
YBX3-205ENST00000536107 NPDC1Q9NQX5 325 aaPredicted RBP9.21□□□□□ -0.94
YBX3-205ENST00000536107 E2F4Q16254 413 aa9.2□□□□□ -0.94
YBX3-205ENST00000536107 STK17AQ9UEE5 414 aa9.2□□□□□ -0.94
YBX3-205ENST00000536107 WFS1O76024 890 aa9.19□□□□□ -0.94
YBX3-205ENST00000536107 CRIPAKQ8N1N5 446 aa9.19□□□□□ -0.94
YBX3-205ENST00000536107 DCAF8L2P0C7V8 631 aa9.18□□□□□ -0.94
YBX3-205ENST00000536107 LMOD2Q6P5Q4 547 aa9.18□□□□□ -0.94
YBX3-205ENST00000536107 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
YBX3-205ENST00000536107 ACTN4O43707 911 aaKnown RBP9.16□□□□□ -0.94
YBX3-205ENST00000536107 ADH1BP00325 375 aa9.16□□□□□ -0.94
YBX3-205ENST00000536107 KMT5BQ4FZB7 885 aa9.15□□□□□ -0.94
YBX3-205ENST00000536107 RB1CC1Q8TDY2 1594 aa9.15□□□□□ -0.95
YBX3-205ENST00000536107 WIPF1O43516 503 aa9.14□□□□□ -0.95
YBX3-205ENST00000536107 AVPP01185 164 aa9.14□□□□□ -0.95
YBX3-205ENST00000536107 PLA2G2CQ5R387 149 aa9.14□□□□□ -0.95
YBX3-205ENST00000536107 PKD2L1Q9P0L9 805 aa9.14□□□□□ -0.95
YBX3-205ENST00000536107 DNAJB2P25686 324 aa9.13□□□□□ -0.95
YBX3-205ENST00000536107 SLC6A16Q9GZN6 736 aa9.13□□□□□ -0.95
YBX3-205ENST00000536107 INSM1Q01101 510 aaPredicted RBP9.12□□□□□ -0.95
YBX3-205ENST00000536107 NFX1Q12986 1120 aaKnown RBP9.12□□□□□ -0.95
YBX3-205ENST00000536107 DACH1Q9UI36 760 aa9.12□□□□□ -0.95
YBX3-205ENST00000536107 NR1I2O75469 434 aa9.11□□□□□ -0.95
YBX3-205ENST00000536107 TMEM134Q9H6X4 195 aa9.11□□□□□ -0.95
YBX3-205ENST00000536107 C11orf95C9JLR9 678 aaPredicted RBP9.1□□□□□ -0.95
YBX3-205ENST00000536107 GMPR2Q9P2T1 348 aaKnown RBP9.1□□□□□ -0.95
YBX3-205ENST00000536107 CFHP08603 1231 aa9.09□□□□□ -0.95
YBX3-205ENST00000536107 FOXC1Q12948 553 aa9.09□□□□□ -0.95
YBX3-205ENST00000536107 CTC1Q2NKJ3 1217 aa9.09□□□□□ -0.95
YBX3-205ENST00000536107 TOR4AQ9NXH8 423 aa9.09□□□□□ -0.95
YBX3-205ENST00000536107 AXIN1O15169 862 aa9.08□□□□□ -0.96
YBX3-205ENST00000536107 SMCPP49901 116 aaPredicted RBP9.08□□□□□ -0.96
YBX3-205ENST00000536107 RPIAP49247 311 aa9.07□□□□□ -0.96
YBX3-205ENST00000536107 RBM46Q8TBY0 533 aaKnown RBP9.07□□□□□ -0.96
YBX3-205ENST00000536107 CECR2Q9BXF3 1484 aa9.07□□□□□ -0.96
YBX3-205ENST00000536107 WDR70Q9NW82 654 aa9.06□□□□□ -0.96
YBX3-205ENST00000536107 SCUBE3Q8IX30 993 aa9.05□□□□□ -0.96
YBX3-205ENST00000536107 CYP4X1Q8N118 509 aa9.04□□□□□ -0.96
YBX3-205ENST00000536107 RCCD1A6NED2 376 aa9.03□□□□□ -0.96
YBX3-205ENST00000536107 SLC10A3P09131 477 aa9.03□□□□□ -0.96
YBX3-205ENST00000536107 BBXQ8WY36 941 aaPredicted RBP9.03□□□□□ -0.96
YBX3-205ENST00000536107 ADGRG1Q9Y653 693 aa9.03□□□□□ -0.96
YBX3-205ENST00000536107 CD2BP2O95400 341 aaKnown RBP9.02□□□□□ -0.97
YBX3-205ENST00000536107 SPSB2Q99619 263 aa9.02□□□□□ -0.97
YBX3-205ENST00000536107 PTGDRQ13258 359 aa9.01□□□□□ -0.97
YBX3-205ENST00000536107 LCE2CQ5TA81 110 aa8.99□□□□□ -0.97
YBX3-205ENST00000536107 TERTO14746 1132 aaKnown RBP8.98□□□□□ -0.97
YBX3-205ENST00000536107 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.97□□□□□ -0.97
YBX3-205ENST00000536107 LOC100996750A0A140TA64 210 aa8.97□□□□□ -0.97
YBX3-205ENST00000536107 KRTAP4-6Q9BYQ5 205 aa8.97□□□□□ -0.97
YBX3-205ENST00000536107 SPRYD3Q8NCJ5 442 aa8.96□□□□□ -0.98
YBX3-205ENST00000536107 FCF1Q9Y324 198 aaKnown RBP8.96□□□□□ -0.98
YBX3-205ENST00000536107 PUS10Q3MIT2 529 aaKnown RBP8.95□□□□□ -0.98
YBX3-205ENST00000536107 ATP13A2Q9NQ11 1180 aa8.95□□□□□ -0.98
YBX3-205ENST00000536107 TTC24A2A3L6 582 aaPredicted RBP8.94□□□□□ -0.98
YBX3-205ENST00000536107 SNRPBP14678 240 aaKnown RBP8.94□□□□□ -0.98
YBX3-205ENST00000536107 TRIM47Q96LD4 638 aa8.94□□□□□ -0.98
YBX3-205ENST00000536107 SENP2Q9HC62 589 aa8.94□□□□□ -0.98
YBX3-205ENST00000536107 RSPH4AQ5TD94 716 aa8.93□□□□□ -0.98
YBX3-205ENST00000536107 FAM181BA6NEQ2 426 aa8.92□□□□□ -0.98
YBX3-205ENST00000536107 FAM161AQ3B820 660 aa8.92□□□□□ -0.98
YBX3-205ENST00000536107 NACADO15069 1562 aa8.91□□□□□ -0.98
YBX3-205ENST00000536107 SMPD1P17405 629 aa8.91□□□□□ -0.98
YBX3-205ENST00000536107 MLLT3P42568 568 aaPredicted RBP8.91□□□□□ -0.98
YBX3-205ENST00000536107 THAP11Q96EK4 314 aa8.91□□□□□ -0.98
YBX3-205ENST00000536107 CC2D2AQ9P2K1 1620 aa8.91□□□□□ -0.98
YBX3-205ENST00000536107 SNIP1Q8TAD8 396 aaKnown RBP8.9□□□□□ -0.98
YBX3-205ENST00000536107 WNT7AO00755 349 aa8.89□□□□□ -0.99
YBX3-205ENST00000536107 MORN1Q5T089 497 aa8.89□□□□□ -0.99
YBX3-205ENST00000536107 FAM160A2Q8N612 972 aaPredicted RBP8.89□□□□□ -0.99
YBX3-205ENST00000536107 KIFC2Q96AC6 838 aa8.89□□□□□ -0.99
YBX3-205ENST00000536107 ZBTB24O43167 697 aaPredicted RBP8.88□□□□□ -0.99
YBX3-205ENST00000536107 OATP04181 439 aa8.88□□□□□ -0.99
YBX3-205ENST00000536107 PXYLP1Q8TE99 480 aa8.88□□□□□ -0.99
YBX3-205ENST00000536107 FMNL1O95466 1100 aaPredicted RBP8.87□□□□□ -0.99
YBX3-205ENST00000536107 SALL2Q9Y467 1007 aaPredicted RBP8.86□□□□□ -0.99
YBX3-205ENST00000536107 NUTM2FA1L443 756 aa8.85□□□□□ -0.99
YBX3-205ENST00000536107 SLC16A10Q8TF71 515 aa8.85□□□□□ -0.99
YBX3-205ENST00000536107 ARHGEF1Q92888 912 aaKnown RBP8.85□□□□□ -0.99
YBX3-205ENST00000536107 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.85□□□□□ -0.99
YBX3-205ENST00000536107 ATP6V1AP38606 617 aa8.84□□□□□ -0.99
YBX3-205ENST00000536107 BICRAQ9NZM4 1560 aa8.84□□□□□ -0.99
YBX3-205ENST00000536107 J3QL48 77 aa8.83□□□□□ -1
YBX3-205ENST00000536107 FCHSD2O94868 740 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms