RNA–Protein interactions for RNA: ENST00000535290.5

CLIP1-206, Transcript of CAP-Gly domain containing linker protein 1, humanhuman

TSL 2

Gene CLIP1, Length 665 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP1-206ENST00000535290 NUTM2DQ5VT03 806 aaPredicted RBP13.38□□□□□ -0.27
CLIP1-206ENST00000535290 CEP152O94986 1710 aa13.38□□□□□ -0.27
CLIP1-206ENST00000535290 EFCAB6Q5THR3 1501 aa13.38□□□□□ -0.27
CLIP1-206ENST00000535290 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.37□□□□□ -0.271e-6■□□□□ 10.5
CLIP1-206ENST00000535290 QTRT2Q9H974 415 aaKnown RBP13.37□□□□□ -0.27
CLIP1-206ENST00000535290 RBM6P78332 1123 aaKnown RBP13.36□□□□□ -0.27
CLIP1-206ENST00000535290 C14orf37Q86TY3 774 aa13.36□□□□□ -0.27
CLIP1-206ENST00000535290 ZRANB1Q9UGI0 708 aa13.36□□□□□ -0.27
CLIP1-206ENST00000535290 EIF2AK4Q9P2K8 1649 aaKnown RBP13.35□□□□□ -0.27
CLIP1-206ENST00000535290 BRINP3Q76B58 766 aa13.34□□□□□ -0.27
CLIP1-206ENST00000535290 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
CLIP1-206ENST00000535290 AHDC1Q5TGY3 1603 aaPredicted RBP13.34□□□□□ -0.27
CLIP1-206ENST00000535290 MAST1Q9Y2H9 1570 aa13.33□□□□□ -0.28
CLIP1-206ENST00000535290 C8orf37Q96NL8 207 aa13.33□□□□□ -0.28
CLIP1-206ENST00000535290 C19orf44Q9H6X5 657 aa13.33□□□□□ -0.28
CLIP1-206ENST00000535290 KDM5AP29375 1690 aaKnown RBP13.33□□□□□ -0.28
CLIP1-206ENST00000535290 SHPRHQ149N8 1683 aa13.33□□□□□ -0.28
CLIP1-206ENST00000535290 NCOA3Q9Y6Q9 1424 aa13.32□□□□□ -0.28
CLIP1-206ENST00000535290 ATF3P18847 181 aa13.32□□□□□ -0.28
CLIP1-206ENST00000535290 SETBP1Q9Y6X0 1596 aa13.32□□□□□ -0.28
CLIP1-206ENST00000535290 DUOX2Q9NRD8 1548 aa13.31□□□□□ -0.28
CLIP1-206ENST00000535290 DIP2AQ14689 1571 aa13.31□□□□□ -0.28
CLIP1-206ENST00000535290 RRP7BPQ9NSQ0 103 aa13.3□□□□□ -0.28
CLIP1-206ENST00000535290 TBX22Q9Y458 520 aa13.3□□□□□ -0.28
CLIP1-206ENST00000535290 ATAD2Q6PL18 1390 aa13.3□□□□□ -0.28
CLIP1-206ENST00000535290 KIF15Q9NS87 1388 aa13.3□□□□□ -0.28
CLIP1-206ENST00000535290 PLEKHG1Q9ULL1 1385 aa13.3□□□□□ -0.28
CLIP1-206ENST00000535290 PPP1R15AO75807 674 aaPredicted RBP13.28□□□□□ -0.28
CLIP1-206ENST00000535290 SLC52A1Q9NWF4 448 aa13.28□□□□□ -0.28
CLIP1-206ENST00000535290 ZFYVE9O95405 1425 aa13.28□□□□□ -0.28
CLIP1-206ENST00000535290 NOS1P29475 1434 aa13.28□□□□□ -0.28
CLIP1-206ENST00000535290 SETD5Q9C0A6 1442 aa13.28□□□□□ -0.28
CLIP1-206ENST00000535290 NGLY1Q96IV0 654 aa13.27□□□□□ -0.29
CLIP1-206ENST00000535290 KANK1Q14678 1352 aa13.27□□□□□ -0.29
CLIP1-206ENST00000535290 ADGRB3O60242 1522 aa13.27□□□□□ -0.29
CLIP1-206ENST00000535290 CHD2O14647 1828 aaKnown RBP13.26□□□□□ -0.29
CLIP1-206ENST00000535290 ADAMTS2O95450 1211 aa13.26□□□□□ -0.29
CLIP1-206ENST00000535290 DDX17Q92841 729 aaKnown RBP13.26□□□□□ -0.29
CLIP1-206ENST00000535290 LRRC59Q96AG4 307 aaKnown RBP13.26□□□□□ -0.29
CLIP1-206ENST00000535290 ERBINQ96RT1 1412 aa13.26□□□□□ -0.29
CLIP1-206ENST00000535290 SIPA1L2Q9P2F8 1722 aaPredicted RBP13.25□□□□□ -0.29
CLIP1-206ENST00000535290 RIMS2Q9UQ26 1411 aa13.25□□□□□ -0.29
CLIP1-206ENST00000535290 PNPLA6Q8IY17 1366 aa13.24□□□□□ -0.29
CLIP1-206ENST00000535290 MYOM3Q5VTT5 1437 aa13.23□□□□□ -0.29
CLIP1-206ENST00000535290 ADAMTS13Q76LX8 1427 aa13.23□□□□□ -0.29
CLIP1-206ENST00000535290 HDGFP51858 240 aaKnown RBP13.23□□□□□ -0.29
CLIP1-206ENST00000535290 LMTK2Q8IWU2 1503 aa13.23□□□□□ -0.29
CLIP1-206ENST00000535290 ASXL1Q8IXJ9 1541 aa13.23□□□□□ -0.29
CLIP1-206ENST00000535290 AMOTL2Q9Y2J4 779 aa13.22□□□□□ -0.29
CLIP1-206ENST00000535290 USP21Q9UK80 565 aa13.21□□□□□ -0.29
CLIP1-206ENST00000535290 ABCC5O15440 1437 aa13.21□□□□□ -0.3
CLIP1-206ENST00000535290 KANK4Q5T7N3 995 aaPredicted RBP13.2□□□□□ -0.3
CLIP1-206ENST00000535290 CCDC125Q86Z20 511 aa13.2□□□□□ -0.3
CLIP1-206ENST00000535290 TRPC5Q9UL62 973 aaPredicted RBP13.2□□□□□ -0.3
CLIP1-206ENST00000535290 MST1RQ04912 1400 aa13.2□□□□□ -0.3
CLIP1-206ENST00000535290 PTPRUQ92729 1446 aa13.2□□□□□ -0.3
CLIP1-206ENST00000535290 PIK3R4Q99570 1358 aa13.2□□□□□ -0.3
CLIP1-206ENST00000535290 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLIP1-206ENST00000535290 FNBP4Q8N3X1 1017 aaPredicted RBP13.18□□□□□ -0.3
CLIP1-206ENST00000535290 DCCP43146 1447 aa13.17□□□□□ -0.3
CLIP1-206ENST00000535290 CHGAP10645 457 aaKnown RBP13.17□□□□□ -0.3
CLIP1-206ENST00000535290 CHIC2Q9UKJ5 165 aa13.16□□□□□ -0.3
CLIP1-206ENST00000535290 ATRNO75882 1429 aa13.15□□□□□ -0.3
CLIP1-206ENST00000535290 NHSL1Q5SYE7 1610 aa13.14□□□□□ -0.31
CLIP1-206ENST00000535290 DEFB132Q7Z7B7 95 aa13.14□□□□□ -0.31
CLIP1-206ENST00000535290 TMEM131LA2VDJ0 1609 aa13.13□□□□□ -0.31
CLIP1-206ENST00000535290 EP400Q96L91 3159 aa13.13□□□□□ -0.31
CLIP1-206ENST00000535290 DAPK1P53355 1430 aa13.13□□□□□ -0.31
CLIP1-206ENST00000535290 RPRD2Q5VT52 1461 aaKnown RBP13.12□□□□□ -0.31
CLIP1-206ENST00000535290 ANKRD30AQ9BXX3 1397 aa13.12□□□□□ -0.31
CLIP1-206ENST00000535290 MYO5BQ9ULV0 1848 aa13.11□□□□□ -0.31
CLIP1-206ENST00000535290 TRPM2O94759 1503 aa13.11□□□□□ -0.31
CLIP1-206ENST00000535290 SOS2Q07890 1332 aaPredicted RBP13.11□□□□□ -0.31
CLIP1-206ENST00000535290 GJD4Q96KN9 370 aaPredicted RBP13.1□□□□□ -0.31
CLIP1-206ENST00000535290 BLMP54132 1417 aaPredicted RBP13.1□□□□□ -0.31
CLIP1-206ENST00000535290 PTCH1Q13635 1447 aa13.1□□□□□ -0.31
CLIP1-206ENST00000535290 BCL9LQ86UU0 1499 aa13.1□□□□□ -0.31
CLIP1-206ENST00000535290 GCC2Q8IWJ2 1684 aa13.09□□□□□ -0.31
CLIP1-206ENST00000535290 ORAI2Q96SN7 254 aa13.09□□□□□ -0.31
CLIP1-206ENST00000535290 ADGRL3Q9HAR2 1447 aa13.08□□□□□ -0.32
CLIP1-206ENST00000535290 PSDA5PKW4 1024 aaPredicted RBP13.08□□□□□ -0.32
CLIP1-206ENST00000535290 METP08581 1390 aa13.07□□□□□ -0.32
CLIP1-206ENST00000535290 C1orf167Q5SNV9 1468 aa13.07□□□□□ -0.32
CLIP1-206ENST00000535290 CROCC2H7BZ55 1655 aa13.07□□□□□ -0.32
CLIP1-206ENST00000535290 LRP5O75197 1615 aa13.06□□□□□ -0.32
CLIP1-206ENST00000535290 HRCP23327 699 aa13.06□□□□□ -0.32
CLIP1-206ENST00000535290 XRN1Q8IZH2 1706 aaKnown RBP13.05□□□□□ -0.32
CLIP1-206ENST00000535290 SF3B2Q13435 895 aaKnown RBP13.04□□□□□ -0.32
CLIP1-206ENST00000535290 VPS8Q8N3P4 1428 aa13.04□□□□□ -0.32
CLIP1-206ENST00000535290 UNC13BO14795 1591 aa13.03□□□□□ -0.32
CLIP1-206ENST00000535290 PTPN23Q9H3S7 1636 aa13.03□□□□□ -0.32
CLIP1-206ENST00000535290 ANKRD50Q9ULJ7 1429 aa13.03□□□□□ -0.32
CLIP1-206ENST00000535290 MYOM2P54296 1465 aa13.03□□□□□ -0.32
CLIP1-206ENST00000535290 MAPK8IP2Q13387 824 aaPredicted RBP13.02□□□□□ -0.33
CLIP1-206ENST00000535290 UNC5CLQ8IV45 518 aa13.01□□□□□ -0.33
CLIP1-206ENST00000535290 RALGAPBQ86X10 1494 aa13.01□□□□□ -0.33
CLIP1-206ENST00000535290 NRXN3Q9Y4C0 1643 aa13.01□□□□□ -0.33
CLIP1-206ENST00000535290 LAMC1P11047 1609 aa13□□□□□ -0.33
CLIP1-206ENST00000535290 SEPT12Q8IYM1 358 aa13□□□□□ -0.33
CLIP1-206ENST00000535290 XPCQ01831 940 aaPredicted RBP12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms