RNA–Protein interactions for RNA: ENST00000535170.5

ZKSCAN1-205, Transcript of zinc finger with KRAB and SCAN domains 1, humanhuman

TSL 2 BASIC

Gene ZKSCAN1, Length 8,758 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZKSCAN1-205ENST00000535170 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.226e-7■■□□□ 11.9
ZKSCAN1-205ENST00000535170 CTDP1Q9Y5B0 961 aaPredicted RBP13.68□□□□□ -0.22
ZKSCAN1-205ENST00000535170 ERICH2A1L162 156 aa13.67□□□□□ -0.22
ZKSCAN1-205ENST00000535170 DHX57Q6P158 1386 aaKnown RBP13.67□□□□□ -0.22
ZKSCAN1-205ENST00000535170 USP47Q96K76 1375 aa13.67□□□□□ -0.22
ZKSCAN1-205ENST00000535170 NAT10Q9H0A0 1025 aaKnown RBP13.67□□□□□ -0.22
ZKSCAN1-205ENST00000535170 XBP1P17861 261 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 CCDC9Q9Y3X0 531 aaKnown RBP13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 TDRD9Q8NDG6 1382 aaKnown RBP13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 SMG6Q86US8 1419 aaKnown RBP13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 EVA1CP58658 441 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 FHOD3Q2V2M9 1422 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 FOXD1Q16676 465 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 BRMS1Q9HCU9 246 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 HIP1O00291 1037 aa13.66□□□□□ -0.22
ZKSCAN1-205ENST00000535170 SAFBQ15424 915 aaKnown RBP eCLIP13.66□□□□□ -0.227e-7■□□□□ 9
ZKSCAN1-205ENST00000535170 SENP3Q9H4L4 574 aaPredicted RBP13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 C9orf78Q9NZ63 289 aaPredicted RBP13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 ZNF330Q9Y3S2 320 aaPredicted RBP13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 TEX35Q5T0J7 233 aa13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 RSPH6AQ9H0K4 717 aa13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 PRM3Q9NNZ6 103 aa13.65□□□□□ -0.22
ZKSCAN1-205ENST00000535170 NUCB2P80303 420 aa13.65□□□□□ -0.23
ZKSCAN1-205ENST00000535170 MTERF4Q7Z6M4 381 aaKnown RBP13.65□□□□□ -0.23
ZKSCAN1-205ENST00000535170 RBM19Q9Y4C8 960 aaKnown RBP13.65□□□□□ -0.23
ZKSCAN1-205ENST00000535170 EHBP1L1Q8N3D4 1523 aa13.64□□□□□ -0.23
ZKSCAN1-205ENST00000535170 SLC4A10Q6U841 1118 aa13.64□□□□□ -0.23
ZKSCAN1-205ENST00000535170 TXLNBQ8N3L3 684 aa13.64□□□□□ -0.23
ZKSCAN1-205ENST00000535170 SYNJ2O15056 1496 aa13.63□□□□□ -0.23
ZKSCAN1-205ENST00000535170 MCM2P49736 904 aa13.63□□□□□ -0.23
ZKSCAN1-205ENST00000535170 LETM1O95202 739 aaPredicted RBP13.63□□□□□ -0.23
ZKSCAN1-205ENST00000535170 DEKP35659 375 aaKnown RBP13.63□□□□□ -0.23
ZKSCAN1-205ENST00000535170 VPS53Q5VIR6 699 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 VPS37DQ86XT2 251 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CCP110O43303 1012 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CPLX1O14810 134 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 GNAI1P63096 354 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 L3MBTL2Q969R5 705 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CUL7Q14999 1698 aa13.62□□□□□ -0.23
ZKSCAN1-205ENST00000535170 APBB1O00213 710 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 PIP4K2AP48426 406 aaPredicted RBP13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CCDC43Q96MW1 224 aaKnown RBP13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 INTS3Q68E01 1043 aaKnown RBP13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 HFM1A2PYH4 1435 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 PDCP20941 246 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CCDC173Q0VFZ6 552 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 PSMA5P28066 241 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 TOMM22Q9NS69 142 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 DAPK1P53355 1430 aa13.61□□□□□ -0.23
ZKSCAN1-205ENST00000535170 CT47B1P0C2W7 299 aaPredicted RBP13.6□□□□□ -0.23
ZKSCAN1-205ENST00000535170 IFIT2P09913 472 aaKnown RBP13.6□□□□□ -0.23
ZKSCAN1-205ENST00000535170 SLC3A2P08195 630 aaKnown RBP13.6□□□□□ -0.23
ZKSCAN1-205ENST00000535170 AK7Q96M32 723 aa13.6□□□□□ -0.23
ZKSCAN1-205ENST00000535170 ARGLU1Q9NWB6 273 aaPredicted RBP13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 G3BP1Q13283 466 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 ARHGAP5Q13017 1502 aa13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 DHX16O60231 1041 aaKnown RBP13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 HNRNPMP52272 730 aaKnown RBP eCLIP13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 OSCARQ8IYS5 282 aa13.59□□□□□ -0.23
ZKSCAN1-205ENST00000535170 SART3Q15020 963 aaKnown RBP13.58□□□□□ -0.23
ZKSCAN1-205ENST00000535170 DIAPH1O60610 1272 aaKnown RBP13.58□□□□□ -0.24
ZKSCAN1-205ENST00000535170 CASKIN1Q8WXD9 1431 aa13.58□□□□□ -0.24
ZKSCAN1-205ENST00000535170 GRIN2BQ13224 1484 aa13.58□□□□□ -0.24
ZKSCAN1-205ENST00000535170 DCAF8L1A6NGE4 600 aa13.58□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RUNDC1Q96C34 613 aa13.58□□□□□ -0.24
ZKSCAN1-205ENST00000535170 IL27Q8NEV9 243 aa13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 NOM1Q5C9Z4 860 aaKnown RBP13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ERC1Q8IUD2 1116 aa13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 SLKQ9H2G2 1235 aaPredicted RBP13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 FGD5Q6ZNL6 1462 aa13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 DCTN1Q14203 1278 aa13.57□□□□□ -0.24
ZKSCAN1-205ENST00000535170 FGD6Q6ZV73 1430 aa13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 PSME1Q06323 249 aa13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ERCC4Q92889 916 aaPredicted RBP13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 BRD4O60885 1362 aaPredicted RBP13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 LUC7LQ9NQ29 371 aaKnown RBP13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 PES1O00541 588 aaKnown RBP13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 GPRASP1Q5JY77 1395 aa13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 R3HCC1Q9Y3T6 440 aaKnown RBP13.56□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RALYLQ86SE5 291 aaKnown RBP13.55□□□□□ -0.24
ZKSCAN1-205ENST00000535170 DDX49Q9Y6V7 483 aaKnown RBP13.55□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ANKRD45Q5TZF3 282 aa13.55□□□□□ -0.24
ZKSCAN1-205ENST00000535170 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ATF3P18847 181 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RUFY1Q96T51 708 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RRP1P56182 461 aaKnown RBP13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 HMGXB3Q12766 1538 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 CCDC73Q6ZRK6 1079 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 POGZQ7Z3K3 1410 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 MAP7D2Q96T17 732 aa13.54□□□□□ -0.24
ZKSCAN1-205ENST00000535170 WWC2Q6AWC2 1192 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 PANK3Q9H999 370 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 DZIP1LQ8IYY4 767 aaKnown RBP13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 KRI1Q8N9T8 703 aaKnown RBP13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 RILPL2Q969X0 211 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 ODF2Q5BJF6 829 aa13.53□□□□□ -0.24
ZKSCAN1-205ENST00000535170 KANK4Q5T7N3 995 aaPredicted RBP13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms