RNA–Protein interactions for RNA: ENST00000534830.5

CLSTN3-203, Transcript of calsyntenin 3, humanhuman

TSL 4

Gene CLSTN3, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-203ENST00000534830 LRP6O75581 1613 aa15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 NKTRP30414 1462 aaKnown RBP15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 RXRBP28702 533 aa15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 GRWD1Q9BQ67 446 aaKnown RBP eCLIP15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 EFCAB6Q5THR3 1501 aa15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 SPATA31A6Q5VVP1 1343 aa15.61■□□□□ 0.09
CLSTN3-203ENST00000534830 COL16A1Q07092 1604 aaPredicted RBP15.6■□□□□ 0.09
CLSTN3-203ENST00000534830 TET3O43151 1660 aa15.6■□□□□ 0.09
CLSTN3-203ENST00000534830 IDI1Q13907 227 aa15.59■□□□□ 0.09
CLSTN3-203ENST00000534830 NWD1Q149M9 1564 aa15.58■□□□□ 0.08
CLSTN3-203ENST00000534830 FAM50AQ14320 339 aaKnown RBP15.57■□□□□ 0.08
CLSTN3-203ENST00000534830 KANK1Q14678 1352 aa15.57■□□□□ 0.08
CLSTN3-203ENST00000534830 SRCAPQ6ZRS2 3230 aa15.56■□□□□ 0.08
CLSTN3-203ENST00000534830 C14orf37Q86TY3 774 aa15.56■□□□□ 0.08
CLSTN3-203ENST00000534830 KDM5AP29375 1690 aaKnown RBP15.56■□□□□ 0.08
CLSTN3-203ENST00000534830 NUTM2BA6NNL0 878 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-203ENST00000534830 NUTM2EB1AL46 878 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-203ENST00000534830 NUTM2AQ8IVF1 878 aaPredicted RBP15.55■□□□□ 0.08
CLSTN3-203ENST00000534830 ANKRD50Q9ULJ7 1429 aa15.54■□□□□ 0.08
CLSTN3-203ENST00000534830 NOS1P29475 1434 aa15.53■□□□□ 0.08
CLSTN3-203ENST00000534830 CDK12Q9NYV4 1490 aaPredicted RBP15.52■□□□□ 0.08
CLSTN3-203ENST00000534830 SHPRHQ149N8 1683 aa15.52■□□□□ 0.08
CLSTN3-203ENST00000534830 ROCK1Q13464 1354 aa15.51■□□□□ 0.07
CLSTN3-203ENST00000534830 CHD2O14647 1828 aaKnown RBP15.51■□□□□ 0.07
CLSTN3-203ENST00000534830 AFF2P51816 1311 aa15.5■□□□□ 0.07
CLSTN3-203ENST00000534830 ADGRB3O60242 1522 aa15.5■□□□□ 0.07
CLSTN3-203ENST00000534830 PPP1R15AO75807 674 aaPredicted RBP15.5■□□□□ 0.07
CLSTN3-203ENST00000534830 ATF3P18847 181 aa15.5■□□□□ 0.07
CLSTN3-203ENST00000534830 UNC13BO14795 1591 aa15.49■□□□□ 0.07
CLSTN3-203ENST00000534830 RPRD2Q5VT52 1461 aaKnown RBP15.49■□□□□ 0.07
CLSTN3-203ENST00000534830 CADPS2Q86UW7 1296 aa15.49■□□□□ 0.07
CLSTN3-203ENST00000534830 AHDC1Q5TGY3 1603 aaPredicted RBP15.49■□□□□ 0.07
CLSTN3-203ENST00000534830 NUTM2DQ5VT03 806 aaPredicted RBP15.48■□□□□ 0.07
CLSTN3-203ENST00000534830 GCC2Q8IWJ2 1684 aa15.48■□□□□ 0.07
CLSTN3-203ENST00000534830 C19orf44Q9H6X5 657 aa15.47■□□□□ 0.07
CLSTN3-203ENST00000534830 PLEKHG1Q9ULL1 1385 aa15.47■□□□□ 0.07
CLSTN3-203ENST00000534830 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.46■□□□□ 0.07
CLSTN3-203ENST00000534830 NCOA3Q9Y6Q9 1424 aa15.46■□□□□ 0.07
CLSTN3-203ENST00000534830 SLC52A1Q9NWF4 448 aa15.46■□□□□ 0.07
CLSTN3-203ENST00000534830 RGS12O14924 1447 aa15.45■□□□□ 0.06
CLSTN3-203ENST00000534830 HDGFP51858 240 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-203ENST00000534830 C8orf37Q96NL8 207 aa15.45■□□□□ 0.06
CLSTN3-203ENST00000534830 QTRT2Q9H974 415 aaKnown RBP15.45■□□□□ 0.06
CLSTN3-203ENST00000534830 RBM6P78332 1123 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 BRINP3Q76B58 766 aa15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 PPARGC1BQ86YN6 1023 aaKnown RBP15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 TBX22Q9Y458 520 aa15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 MYO5BQ9ULV0 1848 aa15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 E9PCH4 1651 aa15.44■□□□□ 0.06
CLSTN3-203ENST00000534830 IQGAP3Q86VI3 1631 aa15.43■□□□□ 0.06
CLSTN3-203ENST00000534830 DIP2AQ14689 1571 aa15.43■□□□□ 0.06
CLSTN3-203ENST00000534830 ZFYVE9O95405 1425 aa15.43■□□□□ 0.06
CLSTN3-203ENST00000534830 RIMS2Q9UQ26 1411 aa15.43■□□□□ 0.06
CLSTN3-203ENST00000534830 RRBP1Q9P2E9 1410 aaKnown RBP15.42■□□□□ 0.06
CLSTN3-203ENST00000534830 ZRANB1Q9UGI0 708 aa15.41■□□□□ 0.06
CLSTN3-203ENST00000534830 TMEM131LA2VDJ0 1609 aa15.4■□□□□ 0.06
CLSTN3-203ENST00000534830 FOXD1Q16676 465 aa15.4■□□□□ 0.06
CLSTN3-203ENST00000534830 CHGAP10645 457 aaKnown RBP15.39■□□□□ 0.05
CLSTN3-203ENST00000534830 ATAD2Q6PL18 1390 aa15.38■□□□□ 0.05
CLSTN3-203ENST00000534830 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.38■□□□□ 0.05
CLSTN3-203ENST00000534830 LRRC59Q96AG4 307 aaKnown RBP15.38■□□□□ 0.05
CLSTN3-203ENST00000534830 NGLY1Q96IV0 654 aa15.38■□□□□ 0.05
CLSTN3-203ENST00000534830 SETD5Q9C0A6 1442 aa15.37■□□□□ 0.05
CLSTN3-203ENST00000534830 ITGAEP38570 1179 aa15.37■□□□□ 0.05
CLSTN3-203ENST00000534830 ASXL1Q8IXJ9 1541 aa15.37■□□□□ 0.05
CLSTN3-203ENST00000534830 NUP155O75694 1391 aa15.36■□□□□ 0.05
CLSTN3-203ENST00000534830 AMOTL2Q9Y2J4 779 aa15.36■□□□□ 0.05
CLSTN3-203ENST00000534830 ADAMTS13Q76LX8 1427 aa15.35■□□□□ 0.05
CLSTN3-203ENST00000534830 ADAMTS2O95450 1211 aa15.35■□□□□ 0.05
CLSTN3-203ENST00000534830 PIK3R4Q99570 1358 aa15.35■□□□□ 0.05
CLSTN3-203ENST00000534830 SETBP1Q9Y6X0 1596 aa15.34■□□□□ 0.05
CLSTN3-203ENST00000534830 DDX17Q92841 729 aaKnown RBP15.34■□□□□ 0.05
CLSTN3-203ENST00000534830 PNPLA6Q8IY17 1366 aa15.33■□□□□ 0.04
CLSTN3-203ENST00000534830 NHSL1Q5SYE7 1610 aa15.32■□□□□ 0.04
CLSTN3-203ENST00000534830 DCCP43146 1447 aa15.32■□□□□ 0.04
CLSTN3-203ENST00000534830 USP21Q9UK80 565 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 MST1RQ04912 1400 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 NAIPQ13075 1403 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 PTPRUQ92729 1446 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 TRPM2O94759 1503 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 SPHKAPQ2M3C7 1700 aa15.31■□□□□ 0.04
CLSTN3-203ENST00000534830 TRPC5Q9UL62 973 aaPredicted RBP15.29■□□□□ 0.04
CLSTN3-203ENST00000534830 EP400Q96L91 3159 aa15.27■□□□□ 0.03
CLSTN3-203ENST00000534830 CCDC125Q86Z20 511 aa15.26■□□□□ 0.03
CLSTN3-203ENST00000534830 HFM1A2PYH4 1435 aa15.26■□□□□ 0.03
CLSTN3-203ENST00000534830 XRN1Q8IZH2 1706 aaKnown RBP15.23■□□□□ 0.03
CLSTN3-203ENST00000534830 CLTCL1P53675 1640 aa15.22■□□□□ 0.03
CLSTN3-203ENST00000534830 NRXN3Q9Y4C0 1643 aa15.22■□□□□ 0.03
CLSTN3-203ENST00000534830 FNBP4Q8N3X1 1017 aaPredicted RBP15.22■□□□□ 0.03
CLSTN3-203ENST00000534830 ATRNO75882 1429 aa15.22■□□□□ 0.03
CLSTN3-203ENST00000534830 ADGRL3Q9HAR2 1447 aa15.21■□□□□ 0.03
CLSTN3-203ENST00000534830 KIF1BO60333 1816 aa15.2■□□□□ 0.02
CLSTN3-203ENST00000534830 PTCH1Q13635 1447 aa15.19■□□□□ 0.02
CLSTN3-203ENST00000534830 METP08581 1390 aa15.19■□□□□ 0.02
CLSTN3-203ENST00000534830 C1orf167Q5SNV9 1468 aa15.19■□□□□ 0.02
CLSTN3-203ENST00000534830 NEXMIFQ5QGS0 1516 aa15.18■□□□□ 0.02
CLSTN3-203ENST00000534830 NALCNQ8IZF0 1738 aa15.18■□□□□ 0.02
CLSTN3-203ENST00000534830 SOS2Q07890 1332 aaPredicted RBP15.17■□□□□ 0.02
CLSTN3-203ENST00000534830 ORAI2Q96SN7 254 aa15.17■□□□□ 0.02
CLSTN3-203ENST00000534830 ZNF326Q5BKZ1 582 aaKnown RBP15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms