RNA–Protein interactions for RNA: ENST00000534405.5

SMPD1-210, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,446 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-210ENST00000534405 AFAP1Q8N556 730 aa25.08■■□□□ 1.61
SMPD1-210ENST00000534405 RNF17Q9BXT8 1623 aaKnown RBP25.07■■□□□ 1.6
SMPD1-210ENST00000534405 RRAGDQ9NQL2 400 aaPredicted RBP25.07■■□□□ 1.6
SMPD1-210ENST00000534405 HSP90AA2PQ14568 343 aaPredicted RBP25.06■■□□□ 1.6
SMPD1-210ENST00000534405 CC2D1BQ5T0F9 858 aaKnown RBP25.06■■□□□ 1.6
SMPD1-210ENST00000534405 PANK3Q9H999 370 aa25.06■■□□□ 1.6
SMPD1-210ENST00000534405 SPAG9O60271 1321 aaKnown RBP25.05■■□□□ 1.6
SMPD1-210ENST00000534405 ZFYVE16Q7Z3T8 1539 aa25.03■■□□□ 1.6
SMPD1-210ENST00000534405 TMF1P82094 1093 aa25.03■■□□□ 1.6
SMPD1-210ENST00000534405 MADDQ8WXG6 1647 aa25.01■■□□□ 1.59
SMPD1-210ENST00000534405 RTEL1-TNFRSF6BF6WH68 1400 aa25■■□□□ 1.59
SMPD1-210ENST00000534405 TRPM2O94759 1503 aa24.99■■□□□ 1.59
SMPD1-210ENST00000534405 ARAP3Q8WWN8 1544 aa24.97■■□□□ 1.59
SMPD1-210ENST00000534405 HSP90AA1P07900 732 aaKnown RBP24.96■■□□□ 1.59
SMPD1-210ENST00000534405 CLTCL1P53675 1640 aa24.96■■□□□ 1.59
SMPD1-210ENST00000534405 PTPRTO14522 1441 aa24.96■■□□□ 1.59
SMPD1-210ENST00000534405 IQGAP1P46940 1657 aa24.95■■□□□ 1.59
SMPD1-210ENST00000534405 RRP1P56182 461 aaKnown RBP24.95■■□□□ 1.59
SMPD1-210ENST00000534405 DEPDC5O75140 1603 aa24.95■■□□□ 1.58
SMPD1-210ENST00000534405 SPHKAPQ2M3C7 1700 aa24.95■■□□□ 1.58
SMPD1-210ENST00000534405 FRAT2O75474 233 aaPredicted RBP24.94■■□□□ 1.58
SMPD1-210ENST00000534405 CDCA7LQ96GN5 454 aa24.94■■□□□ 1.58
SMPD1-210ENST00000534405 WDR7Q9Y4E6 1490 aa24.94■■□□□ 1.58
SMPD1-210ENST00000534405 CEP152O94986 1710 aa24.94■■□□□ 1.58
SMPD1-210ENST00000534405 EXOC6Q8TAG9 804 aa24.94■■□□□ 1.58
SMPD1-210ENST00000534405 RCAN3Q9UKA8 241 aa24.93■■□□□ 1.58
SMPD1-210ENST00000534405 BLMP54132 1417 aaPredicted RBP24.92■■□□□ 1.58
SMPD1-210ENST00000534405 PDE3BQ13370 1112 aa24.9■■□□□ 1.58
SMPD1-210ENST00000534405 INO80Q9ULG1 1556 aaPredicted RBP24.9■■□□□ 1.58
SMPD1-210ENST00000534405 ATP7AQ04656 1500 aa24.9■■□□□ 1.58
SMPD1-210ENST00000534405 FANCAO15360 1455 aa24.9■■□□□ 1.58
SMPD1-210ENST00000534405 ABCA9Q8IUA7 1624 aa24.9■■□□□ 1.58
SMPD1-210ENST00000534405 SLC4A3P48751 1232 aa24.9■■□□□ 1.58
SMPD1-210ENST00000534405 TET3O43151 1660 aa24.89■■□□□ 1.58
SMPD1-210ENST00000534405 NAP1L5Q96NT1 182 aaPredicted RBP24.89■■□□□ 1.58
SMPD1-210ENST00000534405 VWDEQ8N2E2 1590 aa24.88■■□□□ 1.57
SMPD1-210ENST00000534405 SCAF11Q99590 1463 aaKnown RBP24.86■■□□□ 1.57
SMPD1-210ENST00000534405 INSRP06213 1382 aa24.86■■□□□ 1.57
SMPD1-210ENST00000534405 SCAPERQ9BY12 1400 aa24.86■■□□□ 1.57
SMPD1-210ENST00000534405 ZMYM4Q5VZL5 1548 aa24.85■■□□□ 1.57
SMPD1-210ENST00000534405 KIF3BO15066 747 aa24.85■■□□□ 1.57
SMPD1-210ENST00000534405 L1TD1Q5T7N2 865 aaKnown RBP24.85■■□□□ 1.57
SMPD1-210ENST00000534405 PNNQ9H307 717 aaKnown RBP24.85■■□□□ 1.57
SMPD1-210ENST00000534405 CLCN1P35523 988 aa24.84■■□□□ 1.57
SMPD1-210ENST00000534405 AMER1Q5JTC6 1135 aaPredicted RBP24.83■■□□□ 1.56
SMPD1-210ENST00000534405 ADGRL1O94910 1474 aa24.82■■□□□ 1.56
SMPD1-210ENST00000534405 MROH1Q8NDA8 1641 aa24.82■■□□□ 1.56
SMPD1-210ENST00000534405 ADAMTS8Q9UP79 889 aa24.82■■□□□ 1.56
SMPD1-210ENST00000534405 KNSTRNQ9Y448 316 aa24.82■■□□□ 1.56
SMPD1-210ENST00000534405 KANK1Q14678 1352 aa24.82■■□□□ 1.56
SMPD1-210ENST00000534405 UGGT1Q9NYU2 1555 aa24.81■■□□□ 1.56
SMPD1-210ENST00000534405 PPP2R1AP30153 589 aa24.81■■□□□ 1.56
SMPD1-210ENST00000534405 STAC3Q96MF2 364 aa24.8■■□□□ 1.56
SMPD1-210ENST00000534405 SYNMO15061 1565 aa24.8■■□□□ 1.56
SMPD1-210ENST00000534405 MYOM1P52179 1685 aa24.79■■□□□ 1.56
SMPD1-210ENST00000534405 PLIN1O60240 522 aa24.76■■□□□ 1.55
SMPD1-210ENST00000534405 CFAP70Q5T0N1 1121 aa24.75■■□□□ 1.55
SMPD1-210ENST00000534405 CDCA8Q53HL2 280 aa24.75■■□□□ 1.55
SMPD1-210ENST00000534405 ASXL2Q76L83 1435 aa24.74■■□□□ 1.55
SMPD1-210ENST00000534405 ADGRF5Q8IZF2 1346 aa24.74■■□□□ 1.55
SMPD1-210ENST00000534405 KIAA1210Q9ULL0 1709 aa24.74■■□□□ 1.55
SMPD1-210ENST00000534405 POGKQ9P215 609 aa24.74■■□□□ 1.55
SMPD1-210ENST00000534405 ASXL1Q8IXJ9 1541 aa24.74■■□□□ 1.55
SMPD1-210ENST00000534405 CENPJQ9HC77 1338 aaPredicted RBP24.74■■□□□ 1.55
SMPD1-210ENST00000534405 NEURL4Q96JN8 1562 aa24.72■■□□□ 1.55
SMPD1-210ENST00000534405 ABCA6Q8N139 1617 aa24.72■■□□□ 1.55
SMPD1-210ENST00000534405 MAP3K4Q9Y6R4 1608 aa24.72■■□□□ 1.55
SMPD1-210ENST00000534405 PLEKHH1Q9ULM0 1364 aa24.72■■□□□ 1.55
SMPD1-210ENST00000534405 KIDINS220Q9ULH0 1771 aa24.71■■□□□ 1.55
SMPD1-210ENST00000534405 EIF3AQ14152 1382 aaKnown RBP24.71■■□□□ 1.55
SMPD1-210ENST00000534405 EFCAB6Q5THR3 1501 aa24.7■■□□□ 1.54
SMPD1-210ENST00000534405 MYOM2P54296 1465 aa24.69■■□□□ 1.54
SMPD1-210ENST00000534405 RBM10P98175 930 aaKnown RBP24.69■■□□□ 1.54
SMPD1-210ENST00000534405 WDR43Q15061 677 aaKnown RBP eCLIP24.69■■□□□ 1.54
SMPD1-210ENST00000534405 MROH2AA6NES4 1674 aa24.68■■□□□ 1.54
SMPD1-210ENST00000534405 PPRC1Q5VV67 1664 aaKnown RBP24.68■■□□□ 1.54
SMPD1-210ENST00000534405 KDM5AP29375 1690 aaKnown RBP24.68■■□□□ 1.54
SMPD1-210ENST00000534405 ERVK-7P63135 1459 aa24.67■■□□□ 1.54
SMPD1-210ENST00000534405 KIF1BO60333 1816 aa24.67■■□□□ 1.54
SMPD1-210ENST00000534405 PIK3C2GO75747 1445 aa24.66■■□□□ 1.54
SMPD1-210ENST00000534405 CALD1Q05682 793 aaKnown RBP24.66■■□□□ 1.54
SMPD1-210ENST00000534405 CRBNQ96SW2 442 aa24.66■■□□□ 1.54
SMPD1-210ENST00000534405 IFT172Q9UG01 1749 aa24.66■■□□□ 1.54
SMPD1-210ENST00000534405 NPC1L1Q9UHC9 1359 aa24.65■■□□□ 1.54
SMPD1-210ENST00000534405 ZNF521Q96K83 1311 aa24.65■■□□□ 1.54
SMPD1-210ENST00000534405 AAMPQ13685 434 aa24.65■■□□□ 1.54
SMPD1-210ENST00000534405 FAM161AQ3B820 660 aa24.65■■□□□ 1.54
SMPD1-210ENST00000534405 SKAP1Q86WV1 359 aa24.64■■□□□ 1.54
SMPD1-210ENST00000534405 C20orf194Q5TEA3 1177 aa24.63■■□□□ 1.53
SMPD1-210ENST00000534405 DUSP27Q5VZP5 1158 aa24.63■■□□□ 1.53
SMPD1-210ENST00000534405 C8orf34Q49A92 452 aa24.63■■□□□ 1.53
SMPD1-210ENST00000534405 PDCL3Q9H2J4 239 aa24.63■■□□□ 1.53
SMPD1-210ENST00000534405 CARD14Q9BXL6 1004 aa24.62■■□□□ 1.53
SMPD1-210ENST00000534405 PRDM4Q9UKN5 801 aa24.62■■□□□ 1.53
SMPD1-210ENST00000534405 NRXN1Q9ULB1 1477 aa24.61■■□□□ 1.53
SMPD1-210ENST00000534405 LMTK2Q8IWU2 1503 aa24.6■■□□□ 1.53
SMPD1-210ENST00000534405 ZNF518AQ6AHZ1 1483 aa24.6■■□□□ 1.53
SMPD1-210ENST00000534405 XRCC6P12956 609 aaKnown RBP eCLIP24.6■■□□□ 1.53
SMPD1-210ENST00000534405 CCDC146Q8IYE0 955 aa24.59■■□□□ 1.53
SMPD1-210ENST00000534405 NOS1P29475 1434 aa24.58■■□□□ 1.53
Retrieved 100 of 20,778 RNA–protein pairs in 397.8 ms