RNA–Protein interactions for RNA: ENST00000534262.1

HIPK3-206, Transcript of homeodomain interacting protein kinase 3, humanhuman

TSL 1 (best)

Gene HIPK3, Length 349 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-206ENST00000534262 PDE4DQ08499 809 aa8.14□□□□□ -1.11
HIPK3-206ENST00000534262 MMRN1Q13201 1228 aa8.14□□□□□ -1.11
HIPK3-206ENST00000534262 ANKK1Q8NFD2 765 aa8.14□□□□□ -1.11
HIPK3-206ENST00000534262 MDM2Q00987 491 aaPredicted RBP8.13□□□□□ -1.11
HIPK3-206ENST00000534262 KCTD12Q96CX2 325 aaKnown RBP8.13□□□□□ -1.11
HIPK3-206ENST00000534262 CLCN1P35523 988 aa8.12□□□□□ -1.11
HIPK3-206ENST00000534262 THSD4Q6ZMP0 1018 aa8.12□□□□□ -1.11
HIPK3-206ENST00000534262 LRCH3Q96II8 777 aa8.12□□□□□ -1.11
HIPK3-206ENST00000534262 GPCPD1Q9NPB8 672 aa8.12□□□□□ -1.11
HIPK3-206ENST00000534262 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.12□□□□□ -1.11
HIPK3-206ENST00000534262 BCAMP50895 628 aa8.11□□□□□ -1.11
HIPK3-206ENST00000534262 PARP9Q8IXQ6 854 aa8.11□□□□□ -1.11
HIPK3-206ENST00000534262 RNF166Q96A37 237 aaPredicted RBP8.11□□□□□ -1.11
HIPK3-206ENST00000534262 TIMELESSQ9UNS1 1208 aa8.11□□□□□ -1.11
HIPK3-206ENST00000534262 SLF2Q8IX21 1173 aa8.1□□□□□ -1.11
HIPK3-206ENST00000534262 SLC10A3P09131 477 aa8.09□□□□□ -1.11
HIPK3-206ENST00000534262 FAM217BQ9NTX9 383 aaPredicted RBP8.09□□□□□ -1.11
HIPK3-206ENST00000534262 TSR3Q9UJK0 312 aaKnown RBP8.09□□□□□ -1.11
HIPK3-206ENST00000534262 SSTR3P32745 418 aaPredicted RBP8.07□□□□□ -1.12
HIPK3-206ENST00000534262 PPP4CP60510 307 aa8.07□□□□□ -1.12
HIPK3-206ENST00000534262 TTLL12Q14166 644 aaPredicted RBP8.07□□□□□ -1.12
HIPK3-206ENST00000534262 GIGYF2Q6Y7W6 1299 aaKnown RBP8.07□□□□□ -1.12
HIPK3-206ENST00000534262 SULF1Q8IWU6 871 aa8.07□□□□□ -1.12
HIPK3-206ENST00000534262 WBP1LQ9NX94 342 aa8.07□□□□□ -1.12
HIPK3-206ENST00000534262 HPS5Q9UPZ3 1129 aa8.07□□□□□ -1.12
HIPK3-206ENST00000534262 DDX11L8A8MPP1 907 aa8.06□□□□□ -1.12
HIPK3-206ENST00000534262 CD46P15529 392 aa8.06□□□□□ -1.12
HIPK3-206ENST00000534262 MS4A1P11836 297 aa8.05□□□□□ -1.12
HIPK3-206ENST00000534262 SLC4A3P48751 1232 aa8.05□□□□□ -1.12
HIPK3-206ENST00000534262 PTPN5P54829 565 aa8.05□□□□□ -1.12
HIPK3-206ENST00000534262 BRPF1P55201 1214 aaPredicted RBP8.05□□□□□ -1.12
HIPK3-206ENST00000534262 GPBP1L1Q9HC44 474 aaPredicted RBP8.05□□□□□ -1.12
HIPK3-206ENST00000534262 RSPH4AQ5TD94 716 aa8.04□□□□□ -1.12
HIPK3-206ENST00000534262 NECTIN2Q92692 538 aa8.04□□□□□ -1.12
HIPK3-206ENST00000534262 KDM4CQ9H3R0 1056 aa8.04□□□□□ -1.12
HIPK3-206ENST00000534262 HCSTQ9UBK5 93 aa8.04□□□□□ -1.12
HIPK3-206ENST00000534262 RNF40O75150 1001 aa8.03□□□□□ -1.12
HIPK3-206ENST00000534262 GCGRP47871 477 aa8.03□□□□□ -1.12
HIPK3-206ENST00000534262 NYAP1Q6ZVC0 841 aa8.03□□□□□ -1.12
HIPK3-206ENST00000534262 APLP1P51693 650 aa8.02□□□□□ -1.13
HIPK3-206ENST00000534262 NEUROD2Q15784 382 aa8.01□□□□□ -1.13
HIPK3-206ENST00000534262 RDH13Q8NBN7 331 aa8.01□□□□□ -1.13
HIPK3-206ENST00000534262 ACTN4O43707 911 aaKnown RBP8□□□□□ -1.13
HIPK3-206ENST00000534262 CFHP08603 1231 aa8□□□□□ -1.13
HIPK3-206ENST00000534262 BEGAINQ9BUH8 593 aa8□□□□□ -1.13
HIPK3-206ENST00000534262 KMT5BQ4FZB7 885 aa7.98□□□□□ -1.13
HIPK3-206ENST00000534262 PRR14Q9BWN1 585 aa7.98□□□□□ -1.13
HIPK3-206ENST00000534262 FAM117AQ9C073 453 aa7.98□□□□□ -1.13
HIPK3-206ENST00000534262 KDM4AO75164 1064 aa7.97□□□□□ -1.13
HIPK3-206ENST00000534262 GTF3C3Q9Y5Q9 886 aa7.97□□□□□ -1.13
HIPK3-206ENST00000534262 SPIRE2Q8WWL2 714 aa7.96□□□□□ -1.14
HIPK3-206ENST00000534262 ARXQ96QS3 562 aa7.96□□□□□ -1.14
HIPK3-206ENST00000534262 PLSCR2Q9NRY7 297 aa7.96□□□□□ -1.14
HIPK3-206ENST00000534262 PLEKHG3A1L390 1219 aa7.95□□□□□ -1.14
HIPK3-206ENST00000534262 FUT2Q10981 343 aa7.95□□□□□ -1.14
HIPK3-206ENST00000534262 ATP6V1AP38606 617 aa7.94□□□□□ -1.14
HIPK3-206ENST00000534262 USP46P62068 366 aa7.94□□□□□ -1.14
HIPK3-206ENST00000534262 TJAP1Q5JTD0 557 aa7.94□□□□□ -1.14
HIPK3-206ENST00000534262 DDRGK1Q96HY6 314 aa7.94□□□□□ -1.14
HIPK3-206ENST00000534262 DIXDC1Q155Q3 683 aa7.93□□□□□ -1.14
HIPK3-206ENST00000534262 NUTM1Q86Y26 1132 aa7.93□□□□□ -1.14
HIPK3-206ENST00000534262 TBC1D2Q9BYX2 928 aa7.93□□□□□ -1.14
HIPK3-206ENST00000534262 PCDHB3Q9Y5E6 796 aa7.93□□□□□ -1.14
HIPK3-206ENST00000534262 HOXA2O43364 376 aa7.92□□□□□ -1.14
HIPK3-206ENST00000534262 PUS10Q3MIT2 529 aaKnown RBP7.92□□□□□ -1.14
HIPK3-206ENST00000534262 MORN1Q5T089 497 aa7.92□□□□□ -1.14
HIPK3-206ENST00000534262 ERICH6Q7L0X2 663 aa7.92□□□□□ -1.14
HIPK3-206ENST00000534262 IL27Q8NEV9 243 aa7.92□□□□□ -1.14
HIPK3-206ENST00000534262 ITGBL1O95965 494 aaPredicted RBP7.91□□□□□ -1.14
HIPK3-206ENST00000534262 GRIPAP1Q4V328 841 aa7.91□□□□□ -1.14
HIPK3-206ENST00000534262 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
HIPK3-206ENST00000534262 SCUBE3Q8IX30 993 aa7.91□□□□□ -1.14
HIPK3-206ENST00000534262 MTRQ99707 1265 aa7.91□□□□□ -1.14
HIPK3-206ENST00000534262 MOXD2PA6NHM9 499 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 GJA5P36382 358 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 TMEM132AQ24JP5 1023 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 MYSM1Q5VVJ2 828 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 HLA-CQ95604 372 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 SLC27A5Q9Y2P5 690 aa7.9□□□□□ -1.14
HIPK3-206ENST00000534262 NDUFV2P19404 249 aa7.89□□□□□ -1.15
HIPK3-206ENST00000534262 COPS2P61201 443 aa7.89□□□□□ -1.15
HIPK3-206ENST00000534262 ZNF516Q92618 1163 aa7.89□□□□□ -1.15
HIPK3-206ENST00000534262 RSPH6AQ9H0K4 717 aa7.89□□□□□ -1.15
HIPK3-206ENST00000534262 IL21Q9HBE4 155 aa7.89□□□□□ -1.15
HIPK3-206ENST00000534262 SPTLC1O15269 473 aa7.88□□□□□ -1.15
HIPK3-206ENST00000534262 ZPR1O75312 459 aa7.88□□□□□ -1.15
HIPK3-206ENST00000534262 NR1I2O75469 434 aa7.88□□□□□ -1.15
HIPK3-206ENST00000534262 SALL2Q9Y467 1007 aaPredicted RBP7.88□□□□□ -1.15
HIPK3-206ENST00000534262 GUCA2AQ02747 115 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 SKIV2LQ15477 1246 aaKnown RBP7.87□□□□□ -1.15
HIPK3-206ENST00000534262 SH3D19Q5HYK7 790 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 RSBN1LQ6PCB5 846 aaPredicted RBP7.87□□□□□ -1.15
HIPK3-206ENST00000534262 RIC3Q7Z5B4 369 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 THAP11Q96EK4 314 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 GOPCQ9HD26 462 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 PCDHGC3Q9UN70 934 aa7.87□□□□□ -1.15
HIPK3-206ENST00000534262 FDX1P10109 184 aa7.86□□□□□ -1.15
HIPK3-206ENST00000534262 KCNC4Q03721 635 aa7.86□□□□□ -1.15
HIPK3-206ENST00000534262 TUSC1Q2TAM9 212 aa7.86□□□□□ -1.15
HIPK3-206ENST00000534262 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms