RNA–Protein interactions for RNA: ENST00000534216.5

ATPAF1-211, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 5

Gene ATPAF1, Length 693 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-211ENST00000534216 HCSTQ9UBK5 93 aa9.5□□□□□ -0.89
ATPAF1-211ENST00000534216 PTPN5P54829 565 aa9.49□□□□□ -0.89
ATPAF1-211ENST00000534216 HPS5Q9UPZ3 1129 aa9.48□□□□□ -0.89
ATPAF1-211ENST00000534216 SLF2Q8IX21 1173 aa9.47□□□□□ -0.89
ATPAF1-211ENST00000534216 AK7Q96M32 723 aa9.47□□□□□ -0.89
ATPAF1-211ENST00000534216 SLC24A3Q9HC58 644 aa9.47□□□□□ -0.89
ATPAF1-211ENST00000534216 WBP1LQ9NX94 342 aa9.47□□□□□ -0.89
ATPAF1-211ENST00000534216 TSR3Q9UJK0 312 aaKnown RBP9.47□□□□□ -0.89
ATPAF1-211ENST00000534216 RNF40O75150 1001 aa9.46□□□□□ -0.9
ATPAF1-211ENST00000534216 DAXXQ9UER7 740 aaPredicted RBP9.46□□□□□ -0.9
ATPAF1-211ENST00000534216 SLC4A3P48751 1232 aa9.45□□□□□ -0.9
ATPAF1-211ENST00000534216 PPP4CP60510 307 aa9.45□□□□□ -0.9
ATPAF1-211ENST00000534216 TRIM66O15016 1216 aa9.44□□□□□ -0.9
ATPAF1-211ENST00000534216 MDM2Q00987 491 aaPredicted RBP9.44□□□□□ -0.9
ATPAF1-211ENST00000534216 TPRNQ4KMQ1 711 aa9.44□□□□□ -0.9
ATPAF1-211ENST00000534216 AMHR2Q16671 573 aa9.42□□□□□ -0.9
ATPAF1-211ENST00000534216 NYAP1Q6ZVC0 841 aa9.42□□□□□ -0.9
ATPAF1-211ENST00000534216 NECTIN2Q92692 538 aa9.42□□□□□ -0.9
ATPAF1-211ENST00000534216 SLC10A3P09131 477 aa9.41□□□□□ -0.9
ATPAF1-211ENST00000534216 CLCN1P35523 988 aa9.41□□□□□ -0.9
ATPAF1-211ENST00000534216 TMUB1Q9BVT8 246 aa9.41□□□□□ -0.9
ATPAF1-211ENST00000534216 DDX11L8A8MPP1 907 aa9.4□□□□□ -0.9
ATPAF1-211ENST00000534216 GPCPD1Q9NPB8 672 aa9.4□□□□□ -0.9
ATPAF1-211ENST00000534216 RSPH4AQ5TD94 716 aa9.39□□□□□ -0.91
ATPAF1-211ENST00000534216 SULF1Q8IWU6 871 aa9.39□□□□□ -0.91
ATPAF1-211ENST00000534216 REPIN1Q9BWE0 567 aaKnown RBP9.39□□□□□ -0.91
ATPAF1-211ENST00000534216 APLP1P51693 650 aa9.38□□□□□ -0.91
ATPAF1-211ENST00000534216 TTLL12Q14166 644 aaPredicted RBP9.37□□□□□ -0.91
ATPAF1-211ENST00000534216 RDH13Q8NBN7 331 aa9.37□□□□□ -0.91
ATPAF1-211ENST00000534216 CFHP08603 1231 aa9.36□□□□□ -0.91
ATPAF1-211ENST00000534216 PDE4DQ08499 809 aa9.36□□□□□ -0.91
ATPAF1-211ENST00000534216 PARP9Q8IXQ6 854 aa9.36□□□□□ -0.91
ATPAF1-211ENST00000534216 FAM217BQ9NTX9 383 aaPredicted RBP9.36□□□□□ -0.91
ATPAF1-211ENST00000534216 GIGYF2Q6Y7W6 1299 aaKnown RBP9.35□□□□□ -0.91
ATPAF1-211ENST00000534216 PRR14Q9BWN1 585 aa9.35□□□□□ -0.91
ATPAF1-211ENST00000534216 CD46P15529 392 aa9.34□□□□□ -0.91
ATPAF1-211ENST00000534216 KMT5BQ4FZB7 885 aa9.34□□□□□ -0.91
ATPAF1-211ENST00000534216 PRKCSHP14314 528 aaPredicted RBP9.33□□□□□ -0.92
ATPAF1-211ENST00000534216 ACTN4O43707 911 aaKnown RBP9.32□□□□□ -0.92
ATPAF1-211ENST00000534216 SSTR3P32745 418 aaPredicted RBP9.32□□□□□ -0.92
ATPAF1-211ENST00000534216 GCGRP47871 477 aa9.32□□□□□ -0.92
ATPAF1-211ENST00000534216 ITGBL1O95965 494 aaPredicted RBP9.29□□□□□ -0.92
ATPAF1-211ENST00000534216 TJAP1Q5JTD0 557 aa9.29□□□□□ -0.92
ATPAF1-211ENST00000534216 MTRQ99707 1265 aa9.29□□□□□ -0.92
ATPAF1-211ENST00000534216 PCDHB3Q9Y5E6 796 aa9.29□□□□□ -0.92
ATPAF1-211ENST00000534216 MS4A1P11836 297 aa9.28□□□□□ -0.92
ATPAF1-211ENST00000534216 FUT2Q10981 343 aa9.27□□□□□ -0.93
ATPAF1-211ENST00000534216 PLA2G2EQ9NZK7 142 aa9.27□□□□□ -0.93
ATPAF1-211ENST00000534216 KDM4AO75164 1064 aa9.26□□□□□ -0.93
ATPAF1-211ENST00000534216 COPS2P61201 443 aa9.26□□□□□ -0.93
ATPAF1-211ENST00000534216 BLOC1S3Q6QNY0 202 aa9.26□□□□□ -0.93
ATPAF1-211ENST00000534216 BEGAINQ9BUH8 593 aa9.26□□□□□ -0.93
ATPAF1-211ENST00000534216 ATP6V1AP38606 617 aa9.25□□□□□ -0.93
ATPAF1-211ENST00000534216 KCNC4Q03721 635 aa9.25□□□□□ -0.93
ATPAF1-211ENST00000534216 PUS10Q3MIT2 529 aaKnown RBP9.25□□□□□ -0.93
ATPAF1-211ENST00000534216 IL21Q9HBE4 155 aa9.25□□□□□ -0.93
ATPAF1-211ENST00000534216 GPBP1L1Q9HC44 474 aaPredicted RBP9.25□□□□□ -0.93
ATPAF1-211ENST00000534216 IFFO2Q5TF58 517 aa9.24□□□□□ -0.93
ATPAF1-211ENST00000534216 ZNF516Q92618 1163 aa9.24□□□□□ -0.93
ATPAF1-211ENST00000534216 USP46P62068 366 aa9.23□□□□□ -0.93
ATPAF1-211ENST00000534216 MORN1Q5T089 497 aa9.23□□□□□ -0.93
ATPAF1-211ENST00000534216 KDM4CQ9H3R0 1056 aa9.23□□□□□ -0.93
ATPAF1-211ENST00000534216 ZPR1O75312 459 aa9.22□□□□□ -0.93
ATPAF1-211ENST00000534216 NR1I2O75469 434 aa9.22□□□□□ -0.93
ATPAF1-211ENST00000534216 NUTM1Q86Y26 1132 aa9.22□□□□□ -0.93
ATPAF1-211ENST00000534216 NEUROD2Q15784 382 aa9.21□□□□□ -0.94
ATPAF1-211ENST00000534216 GRIPAP1Q4V328 841 aa9.21□□□□□ -0.94
ATPAF1-211ENST00000534216 SCUBE3Q8IX30 993 aa9.21□□□□□ -0.94
ATPAF1-211ENST00000534216 SPIRE2Q8WWL2 714 aa9.21□□□□□ -0.94
ATPAF1-211ENST00000534216 HOXA2O43364 376 aa9.2□□□□□ -0.94
ATPAF1-211ENST00000534216 BRPF1P55201 1214 aaPredicted RBP9.2□□□□□ -0.94
ATPAF1-211ENST00000534216 SLC27A5Q9Y2P5 690 aa9.19□□□□□ -0.94
ATPAF1-211ENST00000534216 NKX2-3Q8TAU0 364 aa9.18□□□□□ -0.94
ATPAF1-211ENST00000534216 HLA-CQ95604 372 aa9.18□□□□□ -0.94
ATPAF1-211ENST00000534216 TBC1D2Q9BYX2 928 aa9.18□□□□□ -0.94
ATPAF1-211ENST00000534216 DIXDC1Q155Q3 683 aa9.17□□□□□ -0.94
ATPAF1-211ENST00000534216 FAM117AQ9C073 453 aa9.17□□□□□ -0.94
ATPAF1-211ENST00000534216 MOXD2PA6NHM9 499 aa9.16□□□□□ -0.94
ATPAF1-211ENST00000534216 TLL1O43897 1013 aa9.16□□□□□ -0.94
ATPAF1-211ENST00000534216 GUCA2AQ02747 115 aa9.16□□□□□ -0.94
ATPAF1-211ENST00000534216 THAP11Q96EK4 314 aa9.15□□□□□ -0.94
ATPAF1-211ENST00000534216 DDRGK1Q96HY6 314 aa9.15□□□□□ -0.94
ATPAF1-211ENST00000534216 SALL2Q9Y467 1007 aaPredicted RBP9.15□□□□□ -0.94
ATPAF1-211ENST00000534216 NDUFV2P19404 249 aa9.14□□□□□ -0.95
ATPAF1-211ENST00000534216 Q3C1V9 767 aa9.14□□□□□ -0.95
ATPAF1-211ENST00000534216 A0A0G2JS52 829 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 PLEKHG3A1L390 1219 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 FMNL1O95466 1100 aaPredicted RBP9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 ADH1BP00325 375 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 FDX1P10109 184 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 MYSM1Q5VVJ2 828 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 BRICD5Q6PL45 260 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 RNF19BQ6ZMZ0 732 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 SPSB2Q99619 263 aa9.13□□□□□ -0.95
ATPAF1-211ENST00000534216 GJA5P36382 358 aa9.12□□□□□ -0.95
ATPAF1-211ENST00000534216 PCDHGC3Q9UN70 934 aa9.12□□□□□ -0.95
ATPAF1-211ENST00000534216 SPTLC1O15269 473 aa9.11□□□□□ -0.95
ATPAF1-211ENST00000534216 RSBN1LQ6PCB5 846 aaPredicted RBP9.11□□□□□ -0.95
ATPAF1-211ENST00000534216 RSPH6AQ9H0K4 717 aa9.11□□□□□ -0.95
ATPAF1-211ENST00000534216 PPP1R18Q6NYC8 613 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms