RNA–Protein interactions for RNA: ENST00000534213.5

GTF2H1-213, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 566 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-213ENST00000534213 NEURL4Q96JN8 1562 aa13.77□□□□□ -0.21
GTF2H1-213ENST00000534213 ARHGAP23Q9P227 1491 aa13.77□□□□□ -0.21
GTF2H1-213ENST00000534213 TMEM131LA2VDJ0 1609 aa13.76□□□□□ -0.21
GTF2H1-213ENST00000534213 CHGAP10645 457 aaKnown RBP13.76□□□□□ -0.21
GTF2H1-213ENST00000534213 RPGRIP1LQ68CZ1 1315 aa13.75□□□□□ -0.21
GTF2H1-213ENST00000534213 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.75□□□□□ -0.21
GTF2H1-213ENST00000534213 EID1Q9Y6B2 187 aa13.75□□□□□ -0.21
GTF2H1-213ENST00000534213 SPATA31E1Q6ZUB1 1445 aa13.73□□□□□ -0.21
GTF2H1-213ENST00000534213 CLSPNQ9HAW4 1339 aa13.73□□□□□ -0.21
GTF2H1-213ENST00000534213 ZFYVE9O95405 1425 aa13.73□□□□□ -0.21
GTF2H1-213ENST00000534213 ZNF326Q5BKZ1 582 aaKnown RBP13.72□□□□□ -0.21
GTF2H1-213ENST00000534213 TXNDC2Q86VQ3 553 aa13.72□□□□□ -0.21
GTF2H1-213ENST00000534213 MED14O60244 1454 aa13.72□□□□□ -0.21
GTF2H1-213ENST00000534213 SCAF11Q99590 1463 aaKnown RBP13.72□□□□□ -0.21
GTF2H1-213ENST00000534213 RIMS2Q9UQ26 1411 aa13.72□□□□□ -0.21
GTF2H1-213ENST00000534213 STAC3Q96MF2 364 aa13.71□□□□□ -0.21
GTF2H1-213ENST00000534213 KIF1BO60333 1816 aa13.71□□□□□ -0.22
GTF2H1-213ENST00000534213 VGFO15240 615 aaPredicted RBP13.7□□□□□ -0.22
GTF2H1-213ENST00000534213 LTKP29376 864 aa13.7□□□□□ -0.22
GTF2H1-213ENST00000534213 NCKAP5LQ9HCH0 1330 aa13.69□□□□□ -0.22
GTF2H1-213ENST00000534213 NPHP4O75161 1426 aaPredicted RBP13.68□□□□□ -0.22
GTF2H1-213ENST00000534213 PPP1R15AO75807 674 aaPredicted RBP13.68□□□□□ -0.22
GTF2H1-213ENST00000534213 PLEKHG1Q9ULL1 1385 aa13.68□□□□□ -0.22
GTF2H1-213ENST00000534213 RGL3Q3MIN7 710 aa13.67□□□□□ -0.22
GTF2H1-213ENST00000534213 NEXMIFQ5QGS0 1516 aa13.67□□□□□ -0.22
GTF2H1-213ENST00000534213 STRCQ7RTU9 1775 aa13.66□□□□□ -0.22
GTF2H1-213ENST00000534213 POLR1AO95602 1720 aaPredicted RBP13.65□□□□□ -0.22
GTF2H1-213ENST00000534213 MYO5BQ9ULV0 1848 aa13.64□□□□□ -0.23
GTF2H1-213ENST00000534213 CCER1Q8TC90 406 aaPredicted RBP13.64□□□□□ -0.23
GTF2H1-213ENST00000534213 SIN3AQ96ST3 1273 aa13.64□□□□□ -0.23
GTF2H1-213ENST00000534213 MYOM2P54296 1465 aa13.63□□□□□ -0.23
GTF2H1-213ENST00000534213 RNF39Q9H2S5 420 aa13.63□□□□□ -0.23
GTF2H1-213ENST00000534213 CACNB1Q02641 598 aaPredicted RBP13.62□□□□□ -0.23
GTF2H1-213ENST00000534213 NEUROD1Q13562 356 aa13.62□□□□□ -0.23
GTF2H1-213ENST00000534213 NCBP3Q53F19 620 aaKnown RBP13.62□□□□□ -0.23
GTF2H1-213ENST00000534213 TIMELESSQ9UNS1 1208 aa13.62□□□□□ -0.23
GTF2H1-213ENST00000534213 TBX22Q9Y458 520 aa13.62□□□□□ -0.23
GTF2H1-213ENST00000534213 IQGAP1P46940 1657 aa13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 NUTM2DQ5VT03 806 aaPredicted RBP13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 DCAF11Q8TEB1 546 aa13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 BCANQ96GW7 911 aa13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 SETBP1Q9Y6X0 1596 aa13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 NRXN1Q9ULB1 1477 aa13.61□□□□□ -0.23
GTF2H1-213ENST00000534213 PPLO60437 1756 aa13.6□□□□□ -0.23
GTF2H1-213ENST00000534213 DIP2AQ14689 1571 aa13.6□□□□□ -0.23
GTF2H1-213ENST00000534213 ADGRF5Q8IZF2 1346 aa13.6□□□□□ -0.23
GTF2H1-213ENST00000534213 PIK3R4Q99570 1358 aa13.59□□□□□ -0.23
GTF2H1-213ENST00000534213 IFT172Q9UG01 1749 aa13.59□□□□□ -0.23
GTF2H1-213ENST00000534213 ADAMTS13Q76LX8 1427 aa13.59□□□□□ -0.23
GTF2H1-213ENST00000534213 NPM3O75607 178 aaKnown RBP13.59□□□□□ -0.23
GTF2H1-213ENST00000534213 L3MBTL2Q969R5 705 aa13.59□□□□□ -0.23
GTF2H1-213ENST00000534213 TONSLQ96HA7 1378 aa13.58□□□□□ -0.23
GTF2H1-213ENST00000534213 PIK3C2GO75747 1445 aa13.58□□□□□ -0.24
GTF2H1-213ENST00000534213 SLC26A8Q96RN1 970 aa13.57□□□□□ -0.24
GTF2H1-213ENST00000534213 C14orf93Q9H972 538 aaKnown RBP13.56□□□□□ -0.24
GTF2H1-213ENST00000534213 KDM2AQ9Y2K7 1162 aa13.56□□□□□ -0.24
GTF2H1-213ENST00000534213 KCNA6P17658 529 aa13.55□□□□□ -0.24
GTF2H1-213ENST00000534213 NRXN3Q9Y4C0 1643 aa13.54□□□□□ -0.24
GTF2H1-213ENST00000534213 ALKQ9UM73 1620 aa13.53□□□□□ -0.24
GTF2H1-213ENST00000534213 PRAG1Q86YV5 1406 aa13.53□□□□□ -0.24
GTF2H1-213ENST00000534213 ZNF335Q9H4Z2 1342 aaPredicted RBP13.52□□□□□ -0.25
GTF2H1-213ENST00000534213 METP08581 1390 aa13.52□□□□□ -0.25
GTF2H1-213ENST00000534213 LAMC1P11047 1609 aa13.51□□□□□ -0.25
GTF2H1-213ENST00000534213 CPS1P31327 1500 aa13.51□□□□□ -0.25
GTF2H1-213ENST00000534213 CFAP70Q5T0N1 1121 aa13.51□□□□□ -0.25
GTF2H1-213ENST00000534213 NKTRP30414 1462 aaKnown RBP13.5□□□□□ -0.25
GTF2H1-213ENST00000534213 NWD1Q149M9 1564 aa13.49□□□□□ -0.25
GTF2H1-213ENST00000534213 AMOTL2Q9Y2J4 779 aa13.49□□□□□ -0.25
GTF2H1-213ENST00000534213 LTBP4Q8N2S1 1624 aa13.49□□□□□ -0.25
GTF2H1-213ENST00000534213 LRPPRCP42704 1394 aaKnown RBP13.48□□□□□ -0.25
GTF2H1-213ENST00000534213 ABCC11Q96J66 1382 aa13.48□□□□□ -0.25
GTF2H1-213ENST00000534213 SETD1AO15047 1707 aaKnown RBP13.48□□□□□ -0.25
GTF2H1-213ENST00000534213 SIRT1Q96EB6 747 aa13.48□□□□□ -0.25
GTF2H1-213ENST00000534213 PTPRUQ92729 1446 aa13.47□□□□□ -0.25
GTF2H1-213ENST00000534213 NCOA3Q9Y6Q9 1424 aa13.47□□□□□ -0.25
GTF2H1-213ENST00000534213 KIAA1210Q9ULL0 1709 aa13.47□□□□□ -0.25
GTF2H1-213ENST00000534213 TECPR2O15040 1411 aa13.47□□□□□ -0.25
GTF2H1-213ENST00000534213 PTCH1Q13635 1447 aa13.47□□□□□ -0.25
GTF2H1-213ENST00000534213 CHD2O14647 1828 aaKnown RBP13.46□□□□□ -0.25
GTF2H1-213ENST00000534213 ADGRB1O14514 1584 aa13.46□□□□□ -0.25
GTF2H1-213ENST00000534213 IQSEC2Q5JU85 1478 aa13.46□□□□□ -0.25
GTF2H1-213ENST00000534213 YTHDC2Q9H6S0 1430 aaKnown RBP13.46□□□□□ -0.26
GTF2H1-213ENST00000534213 NBPF8Q3BBV2 869 aa13.45□□□□□ -0.26
GTF2H1-213ENST00000534213 TMEM132EQ6IEE7 984 aa13.45□□□□□ -0.26
GTF2H1-213ENST00000534213 PROSER2Q86WR7 435 aaPredicted RBP13.45□□□□□ -0.26
GTF2H1-213ENST00000534213 XRN1Q8IZH2 1706 aaKnown RBP13.44□□□□□ -0.26
GTF2H1-213ENST00000534213 ASXL1Q8IXJ9 1541 aa13.44□□□□□ -0.26
GTF2H1-213ENST00000534213 GPRASP1Q5JY77 1395 aa13.44□□□□□ -0.26
GTF2H1-213ENST00000534213 LRRC7Q96NW7 1537 aa13.44□□□□□ -0.26
GTF2H1-213ENST00000534213 FAM135BQ49AJ0 1406 aa13.43□□□□□ -0.26
GTF2H1-213ENST00000534213 CERKQ8TCT0 537 aa13.43□□□□□ -0.26
GTF2H1-213ENST00000534213 ROCK2O75116 1388 aaKnown RBP13.43□□□□□ -0.26
GTF2H1-213ENST00000534213 RALGAPBQ86X10 1494 aa13.42□□□□□ -0.26
GTF2H1-213ENST00000534213 NBPF1Q3BBV0 1214 aa13.42□□□□□ -0.26
GTF2H1-213ENST00000534213 DLC1Q96QB1 1528 aa13.42□□□□□ -0.26
GTF2H1-213ENST00000534213 STRCP1A6NGW2 1772 aa13.42□□□□□ -0.26
GTF2H1-213ENST00000534213 TMEM94Q12767 1356 aa13.42□□□□□ -0.26
GTF2H1-213ENST00000534213 STK26Q9P289 416 aa13.41□□□□□ -0.26
GTF2H1-213ENST00000534213 TRPM1Q7Z4N2 1603 aa13.41□□□□□ -0.26
GTF2H1-213ENST00000534213 ROBO2Q9HCK4 1378 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms