RNA–Protein interactions for RNA: ENST00000534062.1

RTL1-201, Transcript of retrotransposon Gag like 1, humanhuman

APPRIS P1 BASIC

Gene RTL1, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTL1-201ENST00000534062 TRAK1Q9UPV9 953 aa13.2□□□□□ -0.3
RTL1-201ENST00000534062 WASHC2AQ641Q2 1341 aa13.19□□□□□ -0.3
RTL1-201ENST00000534062 C11orf95C9JLR9 678 aaPredicted RBP13.19□□□□□ -0.3
RTL1-201ENST00000534062 CLTCQ00610 1675 aaKnown RBP13.19□□□□□ -0.3
RTL1-201ENST00000534062 AGLP35573 1532 aa13.18□□□□□ -0.3
RTL1-201ENST00000534062 UHRF1BP1Q6BDS2 1440 aa13.17□□□□□ -0.3
RTL1-201ENST00000534062 RALGAPBQ86X10 1494 aa13.17□□□□□ -0.3
RTL1-201ENST00000534062 KIF1BO60333 1816 aa13.17□□□□□ -0.3
RTL1-201ENST00000534062 STAC3Q96MF2 364 aa13.17□□□□□ -0.3
RTL1-201ENST00000534062 KIF7Q2M1P5 1343 aa13.16□□□□□ -0.3
RTL1-201ENST00000534062 ARHGAP31Q2M1Z3 1444 aa13.16□□□□□ -0.3
RTL1-201ENST00000534062 TNRQ92752 1358 aa13.15□□□□□ -0.3
RTL1-201ENST00000534062 ERVK-7P63135 1459 aa13.15□□□□□ -0.3
RTL1-201ENST00000534062 SIGLEC1Q9BZZ2 1709 aa13.15□□□□□ -0.3
RTL1-201ENST00000534062 RPGRIP1LQ68CZ1 1315 aa13.14□□□□□ -0.31
RTL1-201ENST00000534062 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
RTL1-201ENST00000534062 TMF1P82094 1093 aa13.14□□□□□ -0.31
RTL1-201ENST00000534062 ANO8Q9HCE9 1232 aaPredicted RBP13.13□□□□□ -0.31
RTL1-201ENST00000534062 ZC3H13Q5T200 1668 aaKnown RBP13.13□□□□□ -0.31
RTL1-201ENST00000534062 REREQ9P2R6 1566 aa13.13□□□□□ -0.31
RTL1-201ENST00000534062 BCORL1Q5H9F3 1711 aa13.13□□□□□ -0.31
RTL1-201ENST00000534062 SYNMO15061 1565 aa13.12□□□□□ -0.31
RTL1-201ENST00000534062 HDGFP51858 240 aaKnown RBP13.12□□□□□ -0.31
RTL1-201ENST00000534062 POGKQ9P215 609 aa13.12□□□□□ -0.31
RTL1-201ENST00000534062 PREX1Q8TCU6 1659 aa13.11□□□□□ -0.31
RTL1-201ENST00000534062 EIF3AQ14152 1382 aaKnown RBP13.1□□□□□ -0.31
RTL1-201ENST00000534062 EID1Q9Y6B2 187 aa13.1□□□□□ -0.31
RTL1-201ENST00000534062 TXNDC2Q86VQ3 553 aa13.1□□□□□ -0.31
RTL1-201ENST00000534062 MROH2AA6NES4 1674 aa13.09□□□□□ -0.31
RTL1-201ENST00000534062 TMC1Q8TDI8 760 aa13.09□□□□□ -0.31
RTL1-201ENST00000534062 C14orf93Q9H972 538 aaKnown RBP13.09□□□□□ -0.31
RTL1-201ENST00000534062 ADGRB3O60242 1522 aa13.09□□□□□ -0.31
RTL1-201ENST00000534062 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.08□□□□□ -0.32
RTL1-201ENST00000534062 RIMS2Q9UQ26 1411 aa13.07□□□□□ -0.32
RTL1-201ENST00000534062 TRPM1Q7Z4N2 1603 aa13.07□□□□□ -0.32
RTL1-201ENST00000534062 CENPJQ9HC77 1338 aaPredicted RBP13.07□□□□□ -0.32
RTL1-201ENST00000534062 SLC26A8Q96RN1 970 aa13.06□□□□□ -0.32
RTL1-201ENST00000534062 MADDQ8WXG6 1647 aa13.06□□□□□ -0.32
RTL1-201ENST00000534062 SCAF11Q99590 1463 aaKnown RBP13.05□□□□□ -0.32
RTL1-201ENST00000534062 CDCA8Q53HL2 280 aa13.05□□□□□ -0.32
RTL1-201ENST00000534062 THEMISQ8N1K5 641 aaPredicted RBP13.05□□□□□ -0.32
RTL1-201ENST00000534062 NEFLP07196 543 aa13.05□□□□□ -0.32
RTL1-201ENST00000534062 GPRASP1Q5JY77 1395 aa13.05□□□□□ -0.32
RTL1-201ENST00000534062 MINK1Q8N4C8 1332 aaPredicted RBP13.05□□□□□ -0.32
RTL1-201ENST00000534062 MYOM2P54296 1465 aa13.04□□□□□ -0.32
RTL1-201ENST00000534062 DISP3Q9P2K9 1392 aa13.04□□□□□ -0.32
RTL1-201ENST00000534062 SRPK2P78362 688 aaKnown RBP13.04□□□□□ -0.32
RTL1-201ENST00000534062 TESK2Q96S53 571 aa13.04□□□□□ -0.32
RTL1-201ENST00000534062 PIK3C2BO00750 1634 aa13.03□□□□□ -0.32
RTL1-201ENST00000534062 PRAM1Q96QH2 718 aa13.03□□□□□ -0.32
RTL1-201ENST00000534062 A2ML1A8K2U0 1454 aa13.03□□□□□ -0.32
RTL1-201ENST00000534062 MYO5BQ9ULV0 1848 aa13.03□□□□□ -0.32
RTL1-201ENST00000534062 MSH5O43196 834 aa13.02□□□□□ -0.32
RTL1-201ENST00000534062 CC2D1BQ5T0F9 858 aaKnown RBP13.02□□□□□ -0.32
RTL1-201ENST00000534062 PIK3C2GO75747 1445 aa13.02□□□□□ -0.32
RTL1-201ENST00000534062 FER1L4A9Z1Z3 1794 aa13.02□□□□□ -0.32
RTL1-201ENST00000534062 PANK3Q9H999 370 aa13.02□□□□□ -0.33
RTL1-201ENST00000534062 RBM19Q9Y4C8 960 aaKnown RBP13.02□□□□□ -0.33
RTL1-201ENST00000534062 SPATA31D1Q6ZQQ2 1576 aa13.02□□□□□ -0.33
RTL1-201ENST00000534062 LTKP29376 864 aa13.01□□□□□ -0.33
RTL1-201ENST00000534062 NEXMIFQ5QGS0 1516 aa13□□□□□ -0.33
RTL1-201ENST00000534062 WAPLQ7Z5K2 1190 aa13□□□□□ -0.33
RTL1-201ENST00000534062 TMEM131LA2VDJ0 1609 aa13□□□□□ -0.33
RTL1-201ENST00000534062 TMEM2Q9UHN6 1383 aa13□□□□□ -0.33
RTL1-201ENST00000534062 KNSTRNQ9Y448 316 aa12.99□□□□□ -0.33
RTL1-201ENST00000534062 RIMS1Q86UR5 1692 aaKnown RBP12.99□□□□□ -0.33
RTL1-201ENST00000534062 MRS2Q9HD23 443 aa12.99□□□□□ -0.33
RTL1-201ENST00000534062 CABP2Q9NPB3 220 aa12.99□□□□□ -0.33
RTL1-201ENST00000534062 NUTM2FA1L443 756 aa12.99□□□□□ -0.33
RTL1-201ENST00000534062 PPLO60437 1756 aa12.98□□□□□ -0.33
RTL1-201ENST00000534062 FAM9BQ8IZU0 186 aa12.98□□□□□ -0.33
RTL1-201ENST00000534062 SLC24A1O60721 1099 aa12.98□□□□□ -0.33
RTL1-201ENST00000534062 PRKRIP1Q9H875 184 aaPredicted RBP12.97□□□□□ -0.33
RTL1-201ENST00000534062 EVC2Q86UK5 1308 aa12.97□□□□□ -0.33
RTL1-201ENST00000534062 ANKLE2Q86XL3 938 aa12.96□□□□□ -0.33
RTL1-201ENST00000534062 NLRP1Q9C000 1473 aa12.96□□□□□ -0.34
RTL1-201ENST00000534062 C3P01024 1663 aa12.96□□□□□ -0.34
RTL1-201ENST00000534062 NEURL4Q96JN8 1562 aa12.95□□□□□ -0.34
RTL1-201ENST00000534062 YTHDC2Q9H6S0 1430 aaKnown RBP12.95□□□□□ -0.34
RTL1-201ENST00000534062 SENP3-EIF4A1A0A087X0R7 540 aa12.95□□□□□ -0.34
RTL1-201ENST00000534062 C14orf37Q86TY3 774 aa12.94□□□□□ -0.34
RTL1-201ENST00000534062 SLC12A5Q9H2X9 1139 aa12.94□□□□□ -0.34
RTL1-201ENST00000534062 NRXN1Q9ULB1 1477 aa12.94□□□□□ -0.34
RTL1-201ENST00000534062 SALL2Q9Y467 1007 aaPredicted RBP12.93□□□□□ -0.34
RTL1-201ENST00000534062 ZFYVE9O95405 1425 aa12.93□□□□□ -0.34
RTL1-201ENST00000534062 IFT172Q9UG01 1749 aa12.93□□□□□ -0.34
RTL1-201ENST00000534062 TNNT2P45379 298 aaPredicted RBP12.93□□□□□ -0.34
RTL1-201ENST00000534062 METP08581 1390 aa12.93□□□□□ -0.34
RTL1-201ENST00000534062 RBM33Q96EV2 1170 aaKnown RBP12.92□□□□□ -0.34
RTL1-201ENST00000534062 HSPA2P54652 639 aa12.92□□□□□ -0.34
RTL1-201ENST00000534062 KTN1Q86UP2 1357 aaKnown RBP12.91□□□□□ -0.34
RTL1-201ENST00000534062 CCER2I3L3R5 266 aa12.91□□□□□ -0.34
RTL1-201ENST00000534062 AMOTL2Q9Y2J4 779 aa12.91□□□□□ -0.34
RTL1-201ENST00000534062 ALKQ9UM73 1620 aa12.91□□□□□ -0.34
RTL1-201ENST00000534062 CCDC184Q52MB2 194 aa12.91□□□□□ -0.34
RTL1-201ENST00000534062 CDK19Q9BWU1 502 aa12.91□□□□□ -0.34
RTL1-201ENST00000534062 LAMC1P11047 1609 aa12.9□□□□□ -0.34
RTL1-201ENST00000534062 KIAA1210Q9ULL0 1709 aa12.89□□□□□ -0.35
RTL1-201ENST00000534062 PLEKHH1Q9ULM0 1364 aa12.89□□□□□ -0.35
RTL1-201ENST00000534062 IQGAP1P46940 1657 aa12.89□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms