RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 CCER1Q8TC90 406 aaPredicted RBP22.64■■□□□ 1.21
CTTN-215ENST00000533931 MED14O60244 1454 aa22.64■■□□□ 1.21
CTTN-215ENST00000533931 HSPA2P54652 639 aa22.63■■□□□ 1.21
CTTN-215ENST00000533931 MYO5BQ9ULV0 1848 aa22.63■■□□□ 1.21
CTTN-215ENST00000533931 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
CTTN-215ENST00000533931 MYOM2P54296 1465 aa22.6■■□□□ 1.21
CTTN-215ENST00000533931 POLR1AO95602 1720 aaPredicted RBP22.6■■□□□ 1.21
CTTN-215ENST00000533931 VGFO15240 615 aaPredicted RBP22.59■■□□□ 1.21
CTTN-215ENST00000533931 TXNDC2Q86VQ3 553 aa22.59■■□□□ 1.21
CTTN-215ENST00000533931 IFT172Q9UG01 1749 aa22.59■■□□□ 1.21
CTTN-215ENST00000533931 SIN3AQ96ST3 1273 aa22.58■■□□□ 1.21
CTTN-215ENST00000533931 PLEKHG1Q9ULL1 1385 aa22.58■■□□□ 1.21
CTTN-215ENST00000533931 PPLO60437 1756 aa22.58■■□□□ 1.2
CTTN-215ENST00000533931 LTKP29376 864 aa22.57■■□□□ 1.2
CTTN-215ENST00000533931 TIMELESSQ9UNS1 1208 aa22.57■■□□□ 1.2
CTTN-215ENST00000533931 DMRT2Q9Y5R5 561 aa22.57■■□□□ 1.2
CTTN-215ENST00000533931 RGL3Q3MIN7 710 aa22.56■■□□□ 1.2
CTTN-215ENST00000533931 NPHP4O75161 1426 aaPredicted RBP22.56■■□□□ 1.2
CTTN-215ENST00000533931 STRCQ7RTU9 1775 aa22.55■■□□□ 1.2
CTTN-215ENST00000533931 PPP1R15AO75807 674 aaPredicted RBP22.55■■□□□ 1.2
CTTN-215ENST00000533931 NRXN1Q9ULB1 1477 aa22.54■■□□□ 1.2
CTTN-215ENST00000533931 SETBP1Q9Y6X0 1596 aa22.54■■□□□ 1.2
CTTN-215ENST00000533931 NEUROD1Q13562 356 aa22.53■■□□□ 1.2
CTTN-215ENST00000533931 TONSLQ96HA7 1378 aa22.52■■□□□ 1.2
CTTN-215ENST00000533931 NCKAP5LQ9HCH0 1330 aa22.52■■□□□ 1.2
CTTN-215ENST00000533931 IQGAP1P46940 1657 aa22.52■■□□□ 1.2
CTTN-215ENST00000533931 DIP2AQ14689 1571 aa22.51■■□□□ 1.19
CTTN-215ENST00000533931 PIK3C2GO75747 1445 aa22.49■■□□□ 1.19
CTTN-215ENST00000533931 DCAF11Q8TEB1 546 aa22.48■■□□□ 1.19
CTTN-215ENST00000533931 L3MBTL2Q969R5 705 aa22.48■■□□□ 1.19
CTTN-215ENST00000533931 ADAMTS13Q76LX8 1427 aa22.46■■□□□ 1.19
CTTN-215ENST00000533931 TBX22Q9Y458 520 aa22.45■■□□□ 1.18
CTTN-215ENST00000533931 ADGRF5Q8IZF2 1346 aa22.45■■□□□ 1.18
CTTN-215ENST00000533931 LAMC1P11047 1609 aa22.45■■□□□ 1.18
CTTN-215ENST00000533931 NRXN3Q9Y4C0 1643 aa22.45■■□□□ 1.18
CTTN-215ENST00000533931 PIK3R4Q99570 1358 aa22.44■■□□□ 1.18
CTTN-215ENST00000533931 PRAG1Q86YV5 1406 aa22.43■■□□□ 1.18
CTTN-215ENST00000533931 NUTM2DQ5VT03 806 aaPredicted RBP22.43■■□□□ 1.18
CTTN-215ENST00000533931 ALKQ9UM73 1620 aa22.4■■□□□ 1.18
CTTN-215ENST00000533931 BCANQ96GW7 911 aa22.39■■□□□ 1.17
CTTN-215ENST00000533931 C14orf93Q9H972 538 aaKnown RBP22.39■■□□□ 1.17
CTTN-215ENST00000533931 KDM2AQ9Y2K7 1162 aa22.39■■□□□ 1.17
CTTN-215ENST00000533931 KIAA1210Q9ULL0 1709 aa22.38■■□□□ 1.17
CTTN-215ENST00000533931 SETD1AO15047 1707 aaKnown RBP22.37■■□□□ 1.17
CTTN-215ENST00000533931 SLC26A8Q96RN1 970 aa22.35■■□□□ 1.17
CTTN-215ENST00000533931 NWD1Q149M9 1564 aa22.34■■□□□ 1.17
CTTN-215ENST00000533931 ADGRB1O14514 1584 aa22.32■■□□□ 1.16
CTTN-215ENST00000533931 NKTRP30414 1462 aaKnown RBP22.31■■□□□ 1.16
CTTN-215ENST00000533931 METP08581 1390 aa22.31■■□□□ 1.16
CTTN-215ENST00000533931 ASXL1Q8IXJ9 1541 aa22.31■■□□□ 1.16
CTTN-215ENST00000533931 KCNA6P17658 529 aa22.3■■□□□ 1.16
CTTN-215ENST00000533931 CFAP70Q5T0N1 1121 aa22.3■■□□□ 1.16
CTTN-215ENST00000533931 RALGAPBQ86X10 1494 aa22.29■■□□□ 1.16
CTTN-215ENST00000533931 TRPM1Q7Z4N2 1603 aa22.29■■□□□ 1.16
CTTN-215ENST00000533931 CPS1P31327 1500 aa22.29■■□□□ 1.16
CTTN-215ENST00000533931 TECPR2O15040 1411 aa22.29■■□□□ 1.16
CTTN-215ENST00000533931 XRN1Q8IZH2 1706 aaKnown RBP22.28■■□□□ 1.16
CTTN-215ENST00000533931 LRPPRCP42704 1394 aaKnown RBP22.28■■□□□ 1.16
CTTN-215ENST00000533931 GPRASP1Q5JY77 1395 aa22.27■■□□□ 1.16
CTTN-215ENST00000533931 CHD2O14647 1828 aaKnown RBP22.27■■□□□ 1.16
CTTN-215ENST00000533931 ABCC11Q96J66 1382 aa22.26■■□□□ 1.15
CTTN-215ENST00000533931 PTCH1Q13635 1447 aa22.26■■□□□ 1.15
CTTN-215ENST00000533931 PTPRUQ92729 1446 aa22.26■■□□□ 1.15
CTTN-215ENST00000533931 NBPF8Q3BBV2 869 aa22.26■■□□□ 1.15
CTTN-215ENST00000533931 YTHDC2Q9H6S0 1430 aaKnown RBP22.25■■□□□ 1.15
CTTN-215ENST00000533931 KNDC1Q76NI1 1749 aa22.24■■□□□ 1.15
CTTN-215ENST00000533931 DLC1Q96QB1 1528 aa22.24■■□□□ 1.15
CTTN-215ENST00000533931 ZNF335Q9H4Z2 1342 aaPredicted RBP22.24■■□□□ 1.15
CTTN-215ENST00000533931 LTBP4Q8N2S1 1624 aa22.24■■□□□ 1.15
CTTN-215ENST00000533931 SIRT1Q96EB6 747 aa22.23■■□□□ 1.15
CTTN-215ENST00000533931 SENP3Q9H4L4 574 aaPredicted RBP22.23■■□□□ 1.15
CTTN-215ENST00000533931 AMOTL2Q9Y2J4 779 aa22.23■■□□□ 1.15
CTTN-215ENST00000533931 ROCK2O75116 1388 aaKnown RBP22.22■■□□□ 1.15
CTTN-215ENST00000533931 NCOA3Q9Y6Q9 1424 aa22.22■■□□□ 1.15
CTTN-215ENST00000533931 FAM135BQ49AJ0 1406 aa22.21■■□□□ 1.15
CTTN-215ENST00000533931 ZEB1P37275 1124 aaPredicted RBP22.19■■□□□ 1.14
CTTN-215ENST00000533931 TMEM132EQ6IEE7 984 aa22.19■■□□□ 1.14
CTTN-215ENST00000533931 STRCP1A6NGW2 1772 aa22.18■■□□□ 1.14
CTTN-215ENST00000533931 NBPF1Q3BBV0 1214 aa22.18■■□□□ 1.14
CTTN-215ENST00000533931 IQSEC2Q5JU85 1478 aa22.17■■□□□ 1.14
CTTN-215ENST00000533931 LRRC7Q96NW7 1537 aa22.16■■□□□ 1.14
CTTN-215ENST00000533931 ROBO2Q9HCK4 1378 aa22.15■■□□□ 1.14
CTTN-215ENST00000533931 EIF3AQ14152 1382 aaKnown RBP22.13■■□□□ 1.13
CTTN-215ENST00000533931 CARD11Q9BXL7 1154 aa22.13■■□□□ 1.13
CTTN-215ENST00000533931 PROSER2Q86WR7 435 aaPredicted RBP22.12■■□□□ 1.13
CTTN-215ENST00000533931 STK26Q9P289 416 aa22.12■■□□□ 1.13
CTTN-215ENST00000533931 TMEM94Q12767 1356 aa22.12■■□□□ 1.13
CTTN-215ENST00000533931 ARHGEF28Q8N1W1 1705 aaKnown RBP22.1■■□□□ 1.13
CTTN-215ENST00000533931 TRAK1Q9UPV9 953 aa22.09■■□□□ 1.13
CTTN-215ENST00000533931 DCCP43146 1447 aa22.08■■□□□ 1.13
CTTN-215ENST00000533931 ADGRL3Q9HAR2 1447 aa22.08■■□□□ 1.13
CTTN-215ENST00000533931 PRAM1Q96QH2 718 aa22.06■■□□□ 1.12
CTTN-215ENST00000533931 SBNO2Q9Y2G9 1366 aa22.06■■□□□ 1.12
CTTN-215ENST00000533931 POGKQ9P215 609 aa22.05■■□□□ 1.12
CTTN-215ENST00000533931 CENPJQ9HC77 1338 aaPredicted RBP22.05■■□□□ 1.12
CTTN-215ENST00000533931 ADGRB2O60241 1585 aa22.04■■□□□ 1.12
CTTN-215ENST00000533931 MSH6P52701 1360 aa22.03■■□□□ 1.12
CTTN-215ENST00000533931 USP47Q96K76 1375 aa22.03■■□□□ 1.12
CTTN-215ENST00000533931 PLEKHH1Q9ULM0 1364 aa22.03■■□□□ 1.12
CTTN-215ENST00000533931 SLC24A1O60721 1099 aa22.03■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms