RNA–Protein interactions for RNA: ENST00000533705.5

UBQLN1-206, Transcript of ubiquilin 1, humanhuman

TSL 1 (best)

Gene UBQLN1, Length 6,055 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN1-206ENST00000533705 AQRO60306 1485 aaKnown RBP eCLIP7.89□□□□□ -1.156e-7■■■□□ 18.2
UBQLN1-206ENST00000533705 GZF1Q9H116 711 aaPredicted RBP7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 RTN4Q9NQC3 1192 aaKnown RBP7.89□□□□□ -1.15
UBQLN1-206ENST00000533705 RUSC2Q8N2Y8 1516 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 APPP05067 770 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 ESCO1Q5FWF5 840 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 NOC3LQ8WTT2 800 aaKnown RBP7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 RBM33Q96EV2 1170 aaKnown RBP7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 ZNF644Q9H582 1327 aaPredicted RBP7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 APAF1O14727 1248 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 SYNE3Q6ZMZ3 975 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 CWC22Q9HCG8 908 aaKnown RBP7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 TCEAL9Q9UHQ7 104 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 RIPK4P57078 832 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 AFAP1Q8N556 730 aa7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 RBM19Q9Y4C8 960 aaKnown RBP7.88□□□□□ -1.15
UBQLN1-206ENST00000533705 DIAPH3Q9NSV4 1193 aa7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 TMEM132EQ6IEE7 984 aa7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 DHX16O60231 1041 aaKnown RBP7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 FKBP5Q13451 457 aaPredicted RBP7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 API5Q9BZZ5 524 aaKnown RBP7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 PRKRIP1Q9H875 184 aaPredicted RBP7.87□□□□□ -1.15
UBQLN1-206ENST00000533705 NUTM2BA6NNL0 878 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 NUTM2EB1AL46 878 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 H3BQV1 296 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 HMOX1P09601 288 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 IFFO2Q5TF58 517 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 CPLX2Q6PUV4 134 aaKnown RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 NUTM2AQ8IVF1 878 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 FAM184AQ8NB25 1140 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 AIMP1Q12904 312 aaKnown RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 SF3B2Q13435 895 aaKnown RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 SAMD1Q6SPF0 538 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 STRN4Q9NRL3 753 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 IFIT2P09913 472 aaKnown RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 FOXD4L5Q5VV16 416 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 FOXD4L4Q8WXT5 416 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 CABP2Q9NPB3 220 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 PPP1R1BQ9UD71 204 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 TSPYL4Q9UJ04 414 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 ABTB2Q8N961 1025 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 GPRASP1Q5JY77 1395 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 RUFY2Q8WXA3 655 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 GGNBP2Q9H3C7 697 aa7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 ANO8Q9HCE9 1232 aaPredicted RBP7.86□□□□□ -1.15
UBQLN1-206ENST00000533705 G3BP1Q13283 466 aaKnown RBP eCLIP7.85□□□□□ -1.154e-6■□□□□ 9.4
UBQLN1-206ENST00000533705 CEP89Q96ST8 783 aa7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 MIA2Q96PC5 1412 aa7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 RIC3Q7Z5B4 369 aa7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 COG6Q9Y2V7 657 aa7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 PES1O00541 588 aaKnown RBP7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 CENPQQ7L2Z9 268 aaPredicted RBP7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 DDX19BQ9UMR2 479 aa7.85□□□□□ -1.15
UBQLN1-206ENST00000533705 FAM177BA6PVY3 158 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 WWC1Q8IX03 1113 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 GNAI1P63096 354 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 THEMISQ8N1K5 641 aaPredicted RBP7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 ZKSCAN1P17029 563 aaPredicted RBP7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 PIP4K2BP78356 416 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 PLIN1O60240 522 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 RUNDC1Q96C34 613 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 ANKRD50Q9ULJ7 1429 aa7.84□□□□□ -1.15
UBQLN1-206ENST00000533705 RBM42Q9BTD8 480 aaKnown RBP7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 ROCK1Q13464 1354 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 FGD6Q6ZV73 1430 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 PHF14O94880 888 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 TPD52L1Q16890 204 aaPredicted RBP7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 MCTP1Q6DN14 999 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 GRIN2BQ13224 1484 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 TRDNQ13061 729 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 DZIP1LQ8IYY4 767 aaKnown RBP7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 NEUROD6Q96NK8 337 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 ATP6V1DQ9Y5K8 247 aa7.83□□□□□ -1.16
UBQLN1-206ENST00000533705 TRIM29Q14134 588 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 REC8O95072 547 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 TPM3P06753 285 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 HSP90AB4PQ58FF6 505 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 NCAPD3P42695 1498 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 CPLX1O14810 134 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 ARHGAP5Q13017 1502 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 FYB1O15117 783 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 RRP1P56182 461 aaKnown RBP7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 CCDC27Q2M243 656 aa7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 PRG4Q92954 1404 aaPredicted RBP7.82□□□□□ -1.16
UBQLN1-206ENST00000533705 CUX1P39880 1505 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 WASHC2AQ641Q2 1341 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 GOLGA6L3A6NEY3 463 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 FOXD4L6Q3SYB3 417 aaPredicted RBP7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 FOXD4L3Q6VB84 417 aaPredicted RBP7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 CRBNQ96SW2 442 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 SYNJ2O15056 1496 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 RNF20Q5VTR2 975 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 NFXL1Q6ZNB6 911 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 PRDM2Q13029 1718 aa7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 IPO9Q96P70 1041 aaKnown RBP7.81□□□□□ -1.16
UBQLN1-206ENST00000533705 ERICH2A1L162 156 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 CFAP70Q5T0N1 1121 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 CNKSR2Q8WXI2 1034 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 ANO2Q9NQ90 1003 aa7.8□□□□□ -1.16
UBQLN1-206ENST00000533705 ZBED9Q6R2W3 1325 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 163.4 ms