RNA–Protein interactions for RNA: ENST00000533398.5

VAV3-215, Transcript of vav guanine nucleotide exchange factor 3, human

TSL 4

Gene VAV3, Length 578 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
VAV3-215	ENST00000533398	LMTK2	Q8IWU2	1503 aa		14.05	□□□□□ -0.16
VAV3-215	ENST00000533398	STAG3	Q9UJ98	1225 aa		14.05	□□□□□ -0.16
VAV3-215	ENST00000533398	IDI1	Q13907	227 aa		14.04	□□□□□ -0.16
VAV3-215	ENST00000533398	TMEM2	Q9UHN6	1383 aa		14.04	□□□□□ -0.16
VAV3-215	ENST00000533398	ADGRL2	O95490	1459 aa		14.04	□□□□□ -0.16
VAV3-215	ENST00000533398	EID1	Q9Y6B2	187 aa		14.03	□□□□□ -0.16
VAV3-215	ENST00000533398	MYO5B	Q9ULV0	1848 aa		14.03	□□□□□ -0.16
VAV3-215	ENST00000533398	KDM5A	P29375	1690 aa	Known RBP	14.02	□□□□□ -0.16
VAV3-215	ENST00000533398	KCNA4	P22459	653 aa		14.02	□□□□□ -0.17
VAV3-215	ENST00000533398	ADGRB3	O60242	1522 aa		14.01	□□□□□ -0.17
VAV3-215	ENST00000533398	NOS1	P29475	1434 aa		14.01	□□□□□ -0.17
VAV3-215	ENST00000533398	ANKRD50	Q9ULJ7	1429 aa		14	□□□□□ -0.17
VAV3-215	ENST00000533398	RBM33	Q96EV2	1170 aa	Known RBP	14	□□□□□ -0.17
VAV3-215	ENST00000533398	SLC26A8	Q96RN1	970 aa		14	□□□□□ -0.17
VAV3-215	ENST00000533398	GCC2	Q8IWJ2	1684 aa		13.99	□□□□□ -0.17
VAV3-215	ENST00000533398	POTEH	Q6S545	545 aa		13.99	□□□□□ -0.17
VAV3-215	ENST00000533398	TET3	O43151	1660 aa		13.98	□□□□□ -0.17
VAV3-215	ENST00000533398	SLC4A2	P04920	1241 aa		13.98	□□□□□ -0.17
VAV3-215	ENST00000533398	PPARGC1B	Q86YN6	1023 aa	Known RBP	13.98	□□□□□ -0.17
VAV3-215	ENST00000533398	UNC13B	O14795	1591 aa		13.96	□□□□□ -0.17
VAV3-215	ENST00000533398	BCAN	Q96GW7	911 aa		13.96	□□□□□ -0.17
VAV3-215	ENST00000533398	TMEM94	Q12767	1356 aa		13.96	□□□□□ -0.18
VAV3-215	ENST00000533398		E9PCH4	1651 aa		13.95	□□□□□ -0.18
VAV3-215	ENST00000533398	TMEM131L	A2VDJ0	1609 aa		13.94	□□□□□ -0.18
VAV3-215	ENST00000533398	ITGAE	P38570	1179 aa		13.94	□□□□□ -0.18
VAV3-215	ENST00000533398	RPRD2	Q5VT52	1461 aa	Known RBP	13.93	□□□□□ -0.18
VAV3-215	ENST00000533398	KCNA6	P17658	529 aa		13.93	□□□□□ -0.18
VAV3-215	ENST00000533398	PROSER2	Q86WR7	435 aa	Predicted RBP	13.93	□□□□□ -0.18
VAV3-215	ENST00000533398	SLC52A1	Q9NWF4	448 aa		13.93	□□□□□ -0.18
VAV3-215	ENST00000533398	NWD1	Q149M9	1564 aa		13.92	□□□□□ -0.18
VAV3-215	ENST00000533398	ZFYVE9	O95405	1425 aa		13.92	□□□□□ -0.18
VAV3-215	ENST00000533398	CHGA	P10645	457 aa	Known RBP	13.92	□□□□□ -0.18
VAV3-215	ENST00000533398	NUTM2D	Q5VT03	806 aa	Predicted RBP	13.92	□□□□□ -0.18
VAV3-215	ENST00000533398	ROBO1	Q9Y6N7	1651 aa		13.91	□□□□□ -0.18
VAV3-215	ENST00000533398	RIMS2	Q9UQ26	1411 aa		13.91	□□□□□ -0.18
VAV3-215	ENST00000533398	IQGAP3	Q86VI3	1631 aa		13.91	□□□□□ -0.18
VAV3-215	ENST00000533398	CHD2	O14647	1828 aa	Known RBP	13.9	□□□□□ -0.18
VAV3-215	ENST00000533398	PPP1R15A	O75807	674 aa	Predicted RBP	13.9	□□□□□ -0.18
VAV3-215	ENST00000533398	NKTR	P30414	1462 aa	Known RBP	13.88	□□□□□ -0.19
VAV3-215	ENST00000533398	ROCK1	Q13464	1354 aa		13.88	□□□□□ -0.19
VAV3-215	ENST00000533398	PLEKHG1	Q9ULL1	1385 aa		13.88	□□□□□ -0.19
VAV3-215	ENST00000533398	FAM135B	Q49AJ0	1406 aa		13.88	□□□□□ -0.19
VAV3-215	ENST00000533398	NUP155	O75694	1391 aa		13.86	□□□□□ -0.19
VAV3-215	ENST00000533398	RGS17	Q9UGC6	210 aa	Predicted RBP	13.85	□□□□□ -0.19
VAV3-215	ENST00000533398	MSH6	P52701	1360 aa		13.84	□□□□□ -0.19
VAV3-215	ENST00000533398	ABCB7	O75027	752 aa		13.84	□□□□□ -0.19
VAV3-215	ENST00000533398	PHLPP1	O60346	1717 aa		13.84	□□□□□ -0.19
VAV3-215	ENST00000533398	ADAMTS13	Q76LX8	1427 aa		13.83	□□□□□ -0.2
VAV3-215	ENST00000533398	SPHKAP	Q2M3C7	1700 aa		13.83	□□□□□ -0.2
VAV3-215	ENST00000533398	HDGF	P51858	240 aa	Known RBP	13.82	□□□□□ -0.2
VAV3-215	ENST00000533398	C14orf37	Q86TY3	774 aa		13.81	□□□□□ -0.2
VAV3-215	ENST00000533398	SLAIN2	Q9P270	581 aa		13.81	□□□□□ -0.2
VAV3-215	ENST00000533398	TBX22	Q9Y458	520 aa		13.81	□□□□□ -0.2
VAV3-215	ENST00000533398	SIPA1L2	Q9P2F8	1722 aa	Predicted RBP	13.81	□□□□□ -0.2
VAV3-215	ENST00000533398	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	13.8	□□□□□ -0.2
VAV3-215	ENST00000533398	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.8	□□□□□ -0.2
VAV3-215	ENST00000533398	DIP2A	Q14689	1571 aa		13.79	□□□□□ -0.2
VAV3-215	ENST00000533398	NRXN3	Q9Y4C0	1643 aa		13.79	□□□□□ -0.2
VAV3-215	ENST00000533398	PTPRU	Q92729	1446 aa		13.79	□□□□□ -0.2
VAV3-215	ENST00000533398	TRPM2	O94759	1503 aa		13.78	□□□□□ -0.2
VAV3-215	ENST00000533398	COL16A1	Q07092	1604 aa	Predicted RBP	13.78	□□□□□ -0.2
VAV3-215	ENST00000533398	CLTCL1	P53675	1640 aa		13.77	□□□□□ -0.21
VAV3-215	ENST00000533398	POTEA	Q6S8J7	498 aa		13.77	□□□□□ -0.21
VAV3-215	ENST00000533398	ZNF326	Q5BKZ1	582 aa	Known RBP	13.76	□□□□□ -0.21
VAV3-215	ENST00000533398	AMOTL2	Q9Y2J4	779 aa		13.76	□□□□□ -0.21
VAV3-215	ENST00000533398	PIK3R4	Q99570	1358 aa		13.74	□□□□□ -0.21
VAV3-215	ENST00000533398	SETD1A	O15047	1707 aa	Known RBP	13.74	□□□□□ -0.21
VAV3-215	ENST00000533398	XRN1	Q8IZH2	1706 aa	Known RBP	13.74	□□□□□ -0.21
VAV3-215	ENST00000533398	SETBP1	Q9Y6X0	1596 aa		13.74	□□□□□ -0.21
VAV3-215	ENST00000533398	RRBP1	Q9P2E9	1410 aa	Known RBP	13.73	□□□□□ -0.21
VAV3-215	ENST00000533398	JCAD	Q9P266	1359 aa		13.73	□□□□□ -0.21
VAV3-215	ENST00000533398	ATF3	P18847	181 aa		13.73	□□□□□ -0.21
VAV3-215	ENST00000533398	NAIP	Q13075	1403 aa		13.73	□□□□□ -0.21
VAV3-215	ENST00000533398	NCOA3	Q9Y6Q9	1424 aa		13.73	□□□□□ -0.21
VAV3-215	ENST00000533398	LRP6	O75581	1613 aa		13.72	□□□□□ -0.21
VAV3-215	ENST00000533398	KIF1B	O60333	1816 aa		13.72	□□□□□ -0.21
VAV3-215	ENST00000533398	C19orf44	Q9H6X5	657 aa		13.72	□□□□□ -0.21
VAV3-215	ENST00000533398	NEXMIF	Q5QGS0	1516 aa		13.72	□□□□□ -0.21
VAV3-215	ENST00000533398	MET	P08581	1390 aa		13.71	□□□□□ -0.21
VAV3-215	ENST00000533398	CADPS2	Q86UW7	1296 aa		13.71	□□□□□ -0.21
VAV3-215	ENST00000533398	AHDC1	Q5TGY3	1603 aa	Predicted RBP	13.71	□□□□□ -0.22
VAV3-215	ENST00000533398	NALCN	Q8IZF0	1738 aa		13.7	□□□□□ -0.22
VAV3-215	ENST00000533398	SHPRH	Q149N8	1683 aa		13.69	□□□□□ -0.22
VAV3-215	ENST00000533398	TRIM52	Q96A61	297 aa		13.69	□□□□□ -0.22
VAV3-215	ENST00000533398	BRINP3	Q76B58	766 aa		13.68	□□□□□ -0.22
VAV3-215	ENST00000533398	ASXL1	Q8IXJ9	1541 aa		13.67	□□□□□ -0.22
VAV3-215	ENST00000533398	MST1R	Q04912	1400 aa		13.66	□□□□□ -0.22
VAV3-215	ENST00000533398	MEX3C	Q5U5Q3	659 aa	Known RBP	13.66	□□□□□ -0.22
VAV3-215	ENST00000533398	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.66	□□□□□ -0.22
VAV3-215	ENST00000533398	DDX17	Q92841	729 aa	Known RBP	13.66	□□□□□ -0.22
VAV3-215	ENST00000533398	NHSL1	Q5SYE7	1610 aa		13.65	□□□□□ -0.22
VAV3-215	ENST00000533398	NUTM2B	A6NNL0	878 aa	Predicted RBP	13.65	□□□□□ -0.22
VAV3-215	ENST00000533398	NUTM2E	B1AL46	878 aa	Predicted RBP	13.65	□□□□□ -0.22
VAV3-215	ENST00000533398	NUTM2A	Q8IVF1	878 aa	Predicted RBP	13.65	□□□□□ -0.22
VAV3-215	ENST00000533398	HFM1	A2PYH4	1435 aa		13.64	□□□□□ -0.23
VAV3-215	ENST00000533398	DCC	P43146	1447 aa		13.64	□□□□□ -0.23
VAV3-215	ENST00000533398	ADGRL3	Q9HAR2	1447 aa		13.64	□□□□□ -0.23
VAV3-215	ENST00000533398	SPATA31A6	Q5VVP1	1343 aa		13.64	□□□□□ -0.23
VAV3-215	ENST00000533398	PPL	O60437	1756 aa		13.63	□□□□□ -0.23
VAV3-215	ENST00000533398	SLC4A1AP	Q9BWU0	796 aa	Known RBP	13.63	□□□□□ -0.23

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