RNA–Protein interactions for RNA: ENST00000533246.5

BDNF-218, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,000 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-218ENST00000533246 FOXD4L4Q8WXT5 416 aaPredicted RBP15.32■□□□□ 0.04
BDNF-218ENST00000533246 CALD1Q05682 793 aaKnown RBP15.32■□□□□ 0.04
BDNF-218ENST00000533246 KLHL34Q8N239 644 aa15.32■□□□□ 0.04
BDNF-218ENST00000533246 STK31Q9BXU1 1019 aa15.32■□□□□ 0.04
BDNF-218ENST00000533246 TRIM6-TRIM34B2RNG4 842 aa15.31■□□□□ 0.04
BDNF-218ENST00000533246 PPP2R1AP30153 589 aa15.31■□□□□ 0.04
BDNF-218ENST00000533246 CSB-PGBD3P0DP91 1061 aa15.3■□□□□ 0.04
BDNF-218ENST00000533246 CDK13Q14004 1512 aaKnown RBP15.3■□□□□ 0.04
BDNF-218ENST00000533246 TCP11L2Q8N4U5 519 aa15.3■□□□□ 0.04
BDNF-218ENST00000533246 BCAR3O75815 825 aa15.29■□□□□ 0.04
BDNF-218ENST00000533246 DIAPH1O60610 1272 aaKnown RBP15.28■□□□□ 0.04
BDNF-218ENST00000533246 AAMPQ13685 434 aa15.28■□□□□ 0.04
BDNF-218ENST00000533246 FOXD4L6Q3SYB3 417 aaPredicted RBP15.27■□□□□ 0.04
BDNF-218ENST00000533246 FOXD4L3Q6VB84 417 aaPredicted RBP15.27■□□□□ 0.04
BDNF-218ENST00000533246 COG3Q96JB2 828 aa15.27■□□□□ 0.04
BDNF-218ENST00000533246 FAM69CQ0P6D2 419 aa15.27■□□□□ 0.04
BDNF-218ENST00000533246 CC2D2AQ9P2K1 1620 aa15.27■□□□□ 0.03
BDNF-218ENST00000533246 LNPKQ9C0E8 428 aa15.27■□□□□ 0.03
BDNF-218ENST00000533246 EID1Q9Y6B2 187 aa15.27■□□□□ 0.03
BDNF-218ENST00000533246 FAM43AQ8N2R8 423 aa15.26■□□□□ 0.03
BDNF-218ENST00000533246 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
BDNF-218ENST00000533246 DZIP1LQ8IYY4 767 aaKnown RBP15.26■□□□□ 0.03
BDNF-218ENST00000533246 RUNDC1Q96C34 613 aa15.26■□□□□ 0.03
BDNF-218ENST00000533246 RAPGEF3O95398 923 aa15.25■□□□□ 0.03
BDNF-218ENST00000533246 L1TD1Q5T7N2 865 aaKnown RBP15.25■□□□□ 0.03
BDNF-218ENST00000533246 C9orf84Q5VXU9 1444 aa15.25■□□□□ 0.03
BDNF-218ENST00000533246 BRD4O60885 1362 aaPredicted RBP15.25■□□□□ 0.03
BDNF-218ENST00000533246 NUTM2GQ5VZR2 741 aa15.25■□□□□ 0.03
BDNF-218ENST00000533246 ZRSR1Q15695 479 aaKnown RBP15.24■□□□□ 0.03
BDNF-218ENST00000533246 KIAA1211Q6ZU35 1233 aa15.24■□□□□ 0.03
BDNF-218ENST00000533246 TROQ12816 1431 aaPredicted RBP15.24■□□□□ 0.03
BDNF-218ENST00000533246 TSR2Q969E8 191 aaKnown RBP15.23■□□□□ 0.03
BDNF-218ENST00000533246 CCDC9Q9Y3X0 531 aaKnown RBP15.23■□□□□ 0.03
BDNF-218ENST00000533246 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
BDNF-218ENST00000533246 MCCP23508 829 aa15.23■□□□□ 0.03
BDNF-218ENST00000533246 MAPK8IP2Q13387 824 aaPredicted RBP15.23■□□□□ 0.03
BDNF-218ENST00000533246 SCAPERQ9BY12 1400 aa15.23■□□□□ 0.03
BDNF-218ENST00000533246 DAPK1P53355 1430 aa15.22■□□□□ 0.03
BDNF-218ENST00000533246 EIF2S2P20042 333 aaKnown RBP15.22■□□□□ 0.03
BDNF-218ENST00000533246 CHMP3Q9Y3E7 222 aa15.22■□□□□ 0.03
BDNF-218ENST00000533246 MIA2Q96PC5 1412 aa15.21■□□□□ 0.03
BDNF-218ENST00000533246 PLCD3Q8N3E9 789 aa15.21■□□□□ 0.03
BDNF-218ENST00000533246 GBP4Q96PP9 640 aa15.21■□□□□ 0.03
BDNF-218ENST00000533246 RILPL2Q969X0 211 aa15.21■□□□□ 0.03
BDNF-218ENST00000533246 EPRSP07814 1512 aaKnown RBP15.2■□□□□ 0.02
BDNF-218ENST00000533246 APPP05067 770 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 NGEFQ8N5V2 710 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 ARHGAP5Q13017 1502 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 ANKRD30BQ9BXX2 1392 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 SNAPC4Q5SXM2 1469 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 HMGXB3Q12766 1538 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 NPHP1O15259 732 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 HMMRO75330 724 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 LMOD3Q0VAK6 560 aa15.2■□□□□ 0.02
BDNF-218ENST00000533246 PLB1Q6P1J6 1458 aa15.19■□□□□ 0.02
BDNF-218ENST00000533246 FAM13BQ9NYF5 915 aa15.19■□□□□ 0.02
BDNF-218ENST00000533246 PRAM1Q96QH2 718 aa15.19■□□□□ 0.02
BDNF-218ENST00000533246 EXOSC9Q06265 439 aaKnown RBP15.18■□□□□ 0.02
BDNF-218ENST00000533246 C20orf194Q5TEA3 1177 aa15.17■□□□□ 0.02
BDNF-218ENST00000533246 PCF11O94913 1555 aaKnown RBP15.17■□□□□ 0.02
BDNF-218ENST00000533246 DDX19BQ9UMR2 479 aa15.17■□□□□ 0.02
BDNF-218ENST00000533246 EFCAB5A4FU69 1503 aa15.17■□□□□ 0.02
BDNF-218ENST00000533246 PTPRKQ15262 1439 aa15.17■□□□□ 0.02
BDNF-218ENST00000533246 TULP1O00294 542 aaPredicted RBP15.16■□□□□ 0.02
BDNF-218ENST00000533246 SYNJ2O15056 1496 aa15.16■□□□□ 0.02
BDNF-218ENST00000533246 GOLGA6L3A6NEY3 463 aa15.16■□□□□ 0.02
BDNF-218ENST00000533246 PRKAR2BP31323 418 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 DHX37Q8IY37 1157 aaKnown RBP15.15■□□□□ 0.02
BDNF-218ENST00000533246 C1orf115Q9H7X2 142 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 TXNDC2Q86VQ3 553 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 ZNF428Q96B54 188 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 CABP1Q9NZU7 370 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 ABCC5O15440 1437 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 ABCA10Q8WWZ4 1543 aa15.15■□□□□ 0.02
BDNF-218ENST00000533246 EHBP1L1Q8N3D4 1523 aa15.14■□□□□ 0.01
BDNF-218ENST00000533246 ARHGEF11O15085 1522 aa15.14■□□□□ 0.01
BDNF-218ENST00000533246 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.13■□□□□ 0.01
BDNF-218ENST00000533246 MSNP26038 577 aaKnown RBP15.13■□□□□ 0.01
BDNF-218ENST00000533246 NFKBIBQ15653 356 aa15.13■□□□□ 0.01
BDNF-218ENST00000533246 ZHX1Q9UKY1 873 aaPredicted RBP15.13■□□□□ 0.01
BDNF-218ENST00000533246 FKBP5Q13451 457 aaPredicted RBP15.13■□□□□ 0.01
BDNF-218ENST00000533246 MRC2Q9UBG0 1479 aa15.12■□□□□ 0.01
BDNF-218ENST00000533246 TEFQ10587 303 aa15.12■□□□□ 0.01
BDNF-218ENST00000533246 STAC3Q96MF2 364 aa15.11■□□□□ 0.01
BDNF-218ENST00000533246 PDZRN3Q9UPQ7 1066 aa15.11■□□□□ 0.01
BDNF-218ENST00000533246 DNMBPQ6XZF7 1577 aa15.11■□□□□ 0.01
BDNF-218ENST00000533246 TNNT3P45378 269 aaPredicted RBP15.1■□□□□ 0.01
BDNF-218ENST00000533246 DDX49Q9Y6V7 483 aaKnown RBP15.1■□□□□ 0.01
BDNF-218ENST00000533246 BACH2Q9BYV9 841 aa15.1■□□□□ 0.01
BDNF-218ENST00000533246 THUMPD2Q9BTF0 503 aaKnown RBP15.09■□□□□ 0.01
BDNF-218ENST00000533246 GORABQ5T7V8 394 aa15.09■□□□□ 0.01
BDNF-218ENST00000533246 KIAA0586Q9BVV6 1533 aa15.09■□□□□ 0.01
BDNF-218ENST00000533246 NLRP6P59044 892 aa15.09■□□□□ 0.01
BDNF-218ENST00000533246 ZNF608Q9ULD9 1512 aaPredicted RBP15.09■□□□□ 0.01
BDNF-218ENST00000533246 IFT140Q96RY7 1462 aa15.08■□□□□ 0.01
BDNF-218ENST00000533246 DRC7Q8IY82 874 aa15.08■□□□□ 0.01
BDNF-218ENST00000533246 C22orf23Q9BZE7 217 aa15.08■□□□□ 0.01
BDNF-218ENST00000533246 TSPYL4Q9UJ04 414 aa15.08■□□□□ 0.01
BDNF-218ENST00000533246 FRAT2O75474 233 aaPredicted RBP15.08■□□□□ 0
BDNF-218ENST00000533246 NCOA1Q15788 1441 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms