RNA–Protein interactions for RNA: ENST00000533123.5

SMPD1-208, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene SMPD1, Length 2,211 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-208ENST00000533123 ADGRF5Q8IZF2 1346 aa26.23■■□□□ 1.79
SMPD1-208ENST00000533123 MYO3AQ8NEV4 1616 aa26.23■■□□□ 1.79
SMPD1-208ENST00000533123 NEXMIFQ5QGS0 1516 aa26.22■■□□□ 1.79
SMPD1-208ENST00000533123 PPLO60437 1756 aa26.22■■□□□ 1.79
SMPD1-208ENST00000533123 UBR1Q8IWV7 1749 aa26.22■■□□□ 1.79
SMPD1-208ENST00000533123 MYOM2P54296 1465 aa26.19■■□□□ 1.78
SMPD1-208ENST00000533123 VGFO15240 615 aaPredicted RBP26.18■■□□□ 1.78
SMPD1-208ENST00000533123 KDM5AP29375 1690 aaKnown RBP26.18■■□□□ 1.78
SMPD1-208ENST00000533123 SENP3Q9H4L4 574 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-208ENST00000533123 RIMS2Q9UQ26 1411 aa26.16■■□□□ 1.78
SMPD1-208ENST00000533123 CEP170BQ9Y4F5 1589 aaPredicted RBP26.16■■□□□ 1.78
SMPD1-208ENST00000533123 TMEM2Q9UHN6 1383 aa26.14■■□□□ 1.78
SMPD1-208ENST00000533123 THEMISQ8N1K5 641 aaPredicted RBP26.14■■□□□ 1.78
SMPD1-208ENST00000533123 NRXN1Q9ULB1 1477 aa26.14■■□□□ 1.77
SMPD1-208ENST00000533123 NBPF1Q3BBV0 1214 aa26.14■■□□□ 1.77
SMPD1-208ENST00000533123 HIRIP3Q9BW71 556 aaPredicted RBP26.13■■□□□ 1.77
SMPD1-208ENST00000533123 ZFYVE9O95405 1425 aa26.13■■□□□ 1.77
SMPD1-208ENST00000533123 RALGAPBQ86X10 1494 aa26.12■■□□□ 1.77
SMPD1-208ENST00000533123 TRPM1Q7Z4N2 1603 aa26.12■■□□□ 1.77
SMPD1-208ENST00000533123 CFAP70Q5T0N1 1121 aa26.11■■□□□ 1.77
SMPD1-208ENST00000533123 ROCK2O75116 1388 aaKnown RBP26.11■■□□□ 1.77
SMPD1-208ENST00000533123 PIK3C2GO75747 1445 aa26.1■■□□□ 1.77
SMPD1-208ENST00000533123 ABCF1Q8NE71 845 aaKnown RBP eCLIP26.1■■□□□ 1.77
SMPD1-208ENST00000533123 HDGFP51858 240 aaKnown RBP26.09■■□□□ 1.77
SMPD1-208ENST00000533123 ZNF142P52746 1687 aaPredicted RBP26.08■■□□□ 1.77
SMPD1-208ENST00000533123 CARD11Q9BXL7 1154 aa26.08■■□□□ 1.77
SMPD1-208ENST00000533123 LTKP29376 864 aa26.07■■□□□ 1.76
SMPD1-208ENST00000533123 TXNDC2Q86VQ3 553 aa26.06■■□□□ 1.76
SMPD1-208ENST00000533123 SLIT1O75093 1534 aa26.05■■□□□ 1.76
SMPD1-208ENST00000533123 C14orf93Q9H972 538 aaKnown RBP26.05■■□□□ 1.76
SMPD1-208ENST00000533123 ARHGAP23Q9P227 1491 aa26.04■■□□□ 1.76
SMPD1-208ENST00000533123 EID1Q9Y6B2 187 aa26.04■■□□□ 1.76
SMPD1-208ENST00000533123 GPRASP1Q5JY77 1395 aa26.02■■□□□ 1.76
SMPD1-208ENST00000533123 KIAA1210Q9ULL0 1709 aa26.01■■□□□ 1.75
SMPD1-208ENST00000533123 EIF4G2P78344 907 aaKnown RBP eCLIP26.01■■□□□ 1.75
SMPD1-208ENST00000533123 MIER1Q8N108 512 aa26■■□□□ 1.75
SMPD1-208ENST00000533123 BCANQ96GW7 911 aa26■■□□□ 1.75
SMPD1-208ENST00000533123 TMEM132EQ6IEE7 984 aa25.99■■□□□ 1.75
SMPD1-208ENST00000533123 HSPA5P11021 654 aaKnown RBP25.99■■□□□ 1.75
SMPD1-208ENST00000533123 USP47Q96K76 1375 aa25.98■■□□□ 1.75
SMPD1-208ENST00000533123 SCAF11Q99590 1463 aaKnown RBP25.96■■□□□ 1.75
SMPD1-208ENST00000533123 ANKLE2Q86XL3 938 aa25.96■■□□□ 1.75
SMPD1-208ENST00000533123 PLEKHG1Q9ULL1 1385 aa25.95■■□□□ 1.74
SMPD1-208ENST00000533123 ALKQ9UM73 1620 aa25.95■■□□□ 1.74
SMPD1-208ENST00000533123 NRXN3Q9Y4C0 1643 aa25.94■■□□□ 1.74
SMPD1-208ENST00000533123 LAMC1P11047 1609 aa25.93■■□□□ 1.74
SMPD1-208ENST00000533123 ADGRB1O14514 1584 aa25.93■■□□□ 1.74
SMPD1-208ENST00000533123 IQGAP1P46940 1657 aa25.92■■□□□ 1.74
SMPD1-208ENST00000533123 SETBP1Q9Y6X0 1596 aa25.92■■□□□ 1.74
SMPD1-208ENST00000533123 HSPA2P54652 639 aa25.92■■□□□ 1.74
SMPD1-208ENST00000533123 SCAF1Q9H7N4 1312 aaKnown RBP25.91■■□□□ 1.74
SMPD1-208ENST00000533123 SLC26A8Q96RN1 970 aa25.9■■□□□ 1.74
SMPD1-208ENST00000533123 ST20-MTHFSA0A0A6YYL1 179 aa25.9■■□□□ 1.74
SMPD1-208ENST00000533123 LMTK3Q96Q04 1460 aa25.89■■□□□ 1.74
SMPD1-208ENST00000533123 ASXL1Q8IXJ9 1541 aa25.89■■□□□ 1.74
SMPD1-208ENST00000533123 ADAMTS13Q76LX8 1427 aa25.89■■□□□ 1.73
SMPD1-208ENST00000533123 DDX10Q13206 875 aaKnown RBP25.88■■□□□ 1.73
SMPD1-208ENST00000533123 TRAK1Q9UPV9 953 aa25.88■■□□□ 1.73
SMPD1-208ENST00000533123 NCKAP5LQ9HCH0 1330 aa25.87■■□□□ 1.73
SMPD1-208ENST00000533123 SETD1AO15047 1707 aaKnown RBP25.87■■□□□ 1.73
SMPD1-208ENST00000533123 STK26Q9P289 416 aa25.87■■□□□ 1.73
SMPD1-208ENST00000533123 METP08581 1390 aa25.87■■□□□ 1.73
SMPD1-208ENST00000533123 PELP1Q8IZL8 1130 aaKnown RBP25.86■■□□□ 1.73
SMPD1-208ENST00000533123 MED14O60244 1454 aa25.83■■□□□ 1.72
SMPD1-208ENST00000533123 YTHDC2Q9H6S0 1430 aaKnown RBP25.83■■□□□ 1.72
SMPD1-208ENST00000533123 TBX22Q9Y458 520 aa25.82■■□□□ 1.72
SMPD1-208ENST00000533123 POLR1AO95602 1720 aaPredicted RBP25.81■■□□□ 1.72
SMPD1-208ENST00000533123 EIF3AQ14152 1382 aaKnown RBP25.8■■□□□ 1.72
SMPD1-208ENST00000533123 NPHP4O75161 1426 aaPredicted RBP25.79■■□□□ 1.72
SMPD1-208ENST00000533123 C11orf95C9JLR9 678 aaPredicted RBP25.78■■□□□ 1.72
SMPD1-208ENST00000533123 LRPPRCP42704 1394 aaKnown RBP25.77■■□□□ 1.72
SMPD1-208ENST00000533123 TESK2Q96S53 571 aa25.76■■□□□ 1.71
SMPD1-208ENST00000533123 WASHC2AQ641Q2 1341 aa25.76■■□□□ 1.71
SMPD1-208ENST00000533123 DIP2AQ14689 1571 aa25.75■■□□□ 1.71
SMPD1-208ENST00000533123 CENPJQ9HC77 1338 aaPredicted RBP25.74■■□□□ 1.71
SMPD1-208ENST00000533123 ARHGEF28Q8N1W1 1705 aaKnown RBP25.73■■□□□ 1.71
SMPD1-208ENST00000533123 ABCC11Q96J66 1382 aa25.73■■□□□ 1.71
SMPD1-208ENST00000533123 SAFB2Q14151 953 aaKnown RBP eCLIP25.72■■□□□ 1.71
SMPD1-208ENST00000533123 PTPRUQ92729 1446 aa25.72■■□□□ 1.71
SMPD1-208ENST00000533123 PRAM1Q96QH2 718 aa25.72■■□□□ 1.71
SMPD1-208ENST00000533123 AMOTL2Q9Y2J4 779 aa25.71■■□□□ 1.71
SMPD1-208ENST00000533123 WAPLQ7Z5K2 1190 aa25.7■■□□□ 1.7
SMPD1-208ENST00000533123 POGKQ9P215 609 aa25.69■■□□□ 1.7
SMPD1-208ENST00000533123 STRCQ7RTU9 1775 aa25.68■■□□□ 1.7
SMPD1-208ENST00000533123 KIF7Q2M1P5 1343 aa25.67■■□□□ 1.7
SMPD1-208ENST00000533123 TECPR2O15040 1411 aa25.67■■□□□ 1.7
SMPD1-208ENST00000533123 DLC1Q96QB1 1528 aa25.67■■□□□ 1.7
SMPD1-208ENST00000533123 PIK3R4Q99570 1358 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 TMF1P82094 1093 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 POLR3GLQ9BT43 218 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 DISP3Q9P2K9 1392 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 PLEKHH1Q9ULM0 1364 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 QRICH2Q9H0J4 1663 aa25.66■■□□□ 1.7
SMPD1-208ENST00000533123 CCDC7Q96M83 1385 aa25.65■■□□□ 1.7
SMPD1-208ENST00000533123 ROBO2Q9HCK4 1378 aa25.65■■□□□ 1.7
SMPD1-208ENST00000533123 KNDC1Q76NI1 1749 aa25.65■■□□□ 1.7
SMPD1-208ENST00000533123 KCNA6P17658 529 aa25.64■■□□□ 1.69
SMPD1-208ENST00000533123 SBNO2Q9Y2G9 1366 aa25.63■■□□□ 1.69
SMPD1-208ENST00000533123 SIRT1Q96EB6 747 aa25.63■■□□□ 1.69
SMPD1-208ENST00000533123 CPS1P31327 1500 aa25.62■■□□□ 1.69
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms