RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 SLFN5Q08AF3 891 aa11.99□□□□□ -0.49
BDNF-216ENST00000532997 CROCC2H7BZ55 1655 aa11.99□□□□□ -0.49
BDNF-216ENST00000532997 DUSP27Q5VZP5 1158 aa11.98□□□□□ -0.49
BDNF-216ENST00000532997 CEP170Q5SW79 1584 aa11.98□□□□□ -0.49
BDNF-216ENST00000532997 CLUAP1Q96AJ1 413 aa11.98□□□□□ -0.49
BDNF-216ENST00000532997 RSPH6AQ9H0K4 717 aa11.98□□□□□ -0.49
BDNF-216ENST00000532997 SLKQ9H2G2 1235 aaPredicted RBP11.97□□□□□ -0.49
BDNF-216ENST00000532997 ATP10BO94823 1461 aa11.97□□□□□ -0.49
BDNF-216ENST00000532997 ARHGEF5Q12774 1597 aa11.97□□□□□ -0.49
BDNF-216ENST00000532997 C20orf194Q5TEA3 1177 aa11.96□□□□□ -0.49
BDNF-216ENST00000532997 TESK2Q96S53 571 aa11.96□□□□□ -0.49
BDNF-216ENST00000532997 NKTRP30414 1462 aaKnown RBP11.96□□□□□ -0.5
BDNF-216ENST00000532997 HSCBQ8IWL3 235 aa11.96□□□□□ -0.5
BDNF-216ENST00000532997 CHMP4BQ9H444 224 aaKnown RBP11.95□□□□□ -0.5
BDNF-216ENST00000532997 ZBTB4Q9P1Z0 1013 aaPredicted RBP11.95□□□□□ -0.5
BDNF-216ENST00000532997 COG6Q9Y2V7 657 aa11.95□□□□□ -0.5
BDNF-216ENST00000532997 ARXQ96QS3 562 aa11.95□□□□□ -0.5
BDNF-216ENST00000532997 BRPF3Q9ULD4 1205 aa11.95□□□□□ -0.5
BDNF-216ENST00000532997 FRAT2O75474 233 aaPredicted RBP11.94□□□□□ -0.5
BDNF-216ENST00000532997 EIF4G3O43432 1585 aaKnown RBP11.94□□□□□ -0.5
BDNF-216ENST00000532997 GOLGA6L3A6NEY3 463 aa11.93□□□□□ -0.5
BDNF-216ENST00000532997 TRIM44Q96DX7 344 aaPredicted RBP11.93□□□□□ -0.5
BDNF-216ENST00000532997 ANO8Q9HCE9 1232 aaPredicted RBP11.93□□□□□ -0.5
BDNF-216ENST00000532997 GOLGA6L22H0YM25 854 aa11.93□□□□□ -0.5
BDNF-216ENST00000532997 KDM2BQ8NHM5 1336 aa11.93□□□□□ -0.5
BDNF-216ENST00000532997 PNNQ9H307 717 aaKnown RBP11.93□□□□□ -0.5
BDNF-216ENST00000532997 A2MP01023 1474 aa11.93□□□□□ -0.5
BDNF-216ENST00000532997 ABCC10Q5T3U5 1492 aa11.93□□□□□ -0.5
BDNF-216ENST00000532997 PTMSP20962 102 aa11.92□□□□□ -0.5
BDNF-216ENST00000532997 TNNT2P45379 298 aaPredicted RBP11.92□□□□□ -0.5
BDNF-216ENST00000532997 FAM43AQ8N2R8 423 aa11.92□□□□□ -0.5
BDNF-216ENST00000532997 RUNDC1Q96C34 613 aa11.92□□□□□ -0.5
BDNF-216ENST00000532997 ASXL1Q8IXJ9 1541 aa11.92□□□□□ -0.5
BDNF-216ENST00000532997 SCAF11Q99590 1463 aaKnown RBP11.92□□□□□ -0.5
BDNF-216ENST00000532997 PIK3C2GO75747 1445 aa11.92□□□□□ -0.5
BDNF-216ENST00000532997 DUOX2Q9NRD8 1548 aa11.91□□□□□ -0.5
BDNF-216ENST00000532997 BCAR3O75815 825 aa11.91□□□□□ -0.5
BDNF-216ENST00000532997 C8orf34Q49A92 452 aa11.91□□□□□ -0.5
BDNF-216ENST00000532997 SKAP1Q86WV1 359 aa11.91□□□□□ -0.5
BDNF-216ENST00000532997 DNAJC5BQ9UF47 199 aa11.91□□□□□ -0.5
BDNF-216ENST00000532997 IPO8O15397 1037 aaKnown RBP11.9□□□□□ -0.5
BDNF-216ENST00000532997 AMER1Q5JTC6 1135 aaPredicted RBP11.9□□□□□ -0.51
BDNF-216ENST00000532997 NPC1L1Q9UHC9 1359 aa11.9□□□□□ -0.51
BDNF-216ENST00000532997 CDC42BPAQ5VT25 1732 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 TRPM1Q7Z4N2 1603 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 KIF3BO15066 747 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 ZKSCAN2Q63HK3 967 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 U2AF1L5P0DN76 240 aaPredicted RBP11.89□□□□□ -0.51
BDNF-216ENST00000532997 U2AF1Q01081 240 aaKnown RBP eCLIP11.89□□□□□ -0.51
BDNF-216ENST00000532997 PANK1Q8TE04 598 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 PLEKHH1Q9ULM0 1364 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 SYCP2Q9BX26 1530 aa11.89□□□□□ -0.51
BDNF-216ENST00000532997 HSP90AB1P08238 724 aaKnown RBP11.89□□□□□ -0.51
BDNF-216ENST00000532997 NAP1L5Q96NT1 182 aaPredicted RBP11.89□□□□□ -0.51
BDNF-216ENST00000532997 PRDM15P57071 1507 aaPredicted RBP11.88□□□□□ -0.51
BDNF-216ENST00000532997 DDX11L8A8MPP1 907 aa11.88□□□□□ -0.51
BDNF-216ENST00000532997 GBP4Q96PP9 640 aa11.88□□□□□ -0.51
BDNF-216ENST00000532997 CHMP5Q9NZZ3 219 aa11.88□□□□□ -0.51
BDNF-216ENST00000532997 ABCA8O94911 1581 aa11.87□□□□□ -0.51
BDNF-216ENST00000532997 CFAP44Q96MT7 982 aa11.87□□□□□ -0.51
BDNF-216ENST00000532997 WDR63Q8IWG1 891 aa11.87□□□□□ -0.51
BDNF-216ENST00000532997 SMC4Q9NTJ3 1288 aa11.87□□□□□ -0.51
BDNF-216ENST00000532997 LAMC1P11047 1609 aa11.86□□□□□ -0.51
BDNF-216ENST00000532997 U2SURPO15042 1029 aaKnown RBP11.86□□□□□ -0.51
BDNF-216ENST00000532997 MFAP1P55081 439 aaKnown RBP11.86□□□□□ -0.51
BDNF-216ENST00000532997 RRP7AQ9Y3A4 280 aaKnown RBP11.86□□□□□ -0.51
BDNF-216ENST00000532997 E9PCH4 1651 aa11.86□□□□□ -0.51
BDNF-216ENST00000532997 ITPRIPQ8IWB1 547 aa11.86□□□□□ -0.51
BDNF-216ENST00000532997 DZIP1LQ8IYY4 767 aaKnown RBP11.85□□□□□ -0.51
BDNF-216ENST00000532997 SPRYD3Q8NCJ5 442 aa11.85□□□□□ -0.51
BDNF-216ENST00000532997 DDX19BQ9UMR2 479 aa11.85□□□□□ -0.51
BDNF-216ENST00000532997 CT47B1P0C2W7 299 aaPredicted RBP11.85□□□□□ -0.51
BDNF-216ENST00000532997 WWC1Q8IX03 1113 aa11.85□□□□□ -0.51
BDNF-216ENST00000532997 TCP11L2Q8N4U5 519 aa11.84□□□□□ -0.51
BDNF-216ENST00000532997 PDZRN3Q9UPQ7 1066 aa11.84□□□□□ -0.51
BDNF-216ENST00000532997 MAST1Q9Y2H9 1570 aa11.84□□□□□ -0.51
BDNF-216ENST00000532997 NPM1P06748 294 aaKnown RBP eCLIP11.84□□□□□ -0.51
BDNF-216ENST00000532997 CFAP70Q5T0N1 1121 aa11.83□□□□□ -0.52
BDNF-216ENST00000532997 BCL2L13Q9BXK5 485 aa11.83□□□□□ -0.52
BDNF-216ENST00000532997 GZF1Q9H116 711 aaPredicted RBP11.83□□□□□ -0.52
BDNF-216ENST00000532997 C22orf23Q9BZE7 217 aa11.83□□□□□ -0.52
BDNF-216ENST00000532997 PREX2Q70Z35 1606 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 SYNMO15061 1565 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 PRKCSHP14314 528 aaPredicted RBP11.82□□□□□ -0.52
BDNF-216ENST00000532997 TRAK1Q9UPV9 953 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 ABCC2Q92887 1545 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 EVC2Q86UK5 1308 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 SAMD9LQ8IVG5 1584 aa11.82□□□□□ -0.52
BDNF-216ENST00000532997 SKOR2Q2VWA4 1001 aaPredicted RBP11.81□□□□□ -0.52
BDNF-216ENST00000532997 ISY1Q9ULR0 285 aaKnown RBP11.81□□□□□ -0.52
BDNF-216ENST00000532997 ZNF521Q96K83 1311 aa11.81□□□□□ -0.52
BDNF-216ENST00000532997 CALD1Q05682 793 aaKnown RBP11.81□□□□□ -0.52
BDNF-216ENST00000532997 RARSP54136 660 aaKnown RBP11.8□□□□□ -0.52
BDNF-216ENST00000532997 UNC13BO14795 1591 aa11.8□□□□□ -0.52
BDNF-216ENST00000532997 ATP10AO60312 1499 aa11.8□□□□□ -0.52
BDNF-216ENST00000532997 POLR3AO14802 1390 aaPredicted RBP11.8□□□□□ -0.52
BDNF-216ENST00000532997 IGHDP01880 384 aa11.8□□□□□ -0.52
BDNF-216ENST00000532997 MRE11P49959 708 aa11.8□□□□□ -0.52
BDNF-216ENST00000532997 MVPQ14764 893 aaKnown RBP11.8□□□□□ -0.52
BDNF-216ENST00000532997 KIF16BQ96L93 1317 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms